RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 C11orf16Q9NQ32 467 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 SAMD15Q9P1V8 674 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 PCDHA8Q9Y5H6 950 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 AREL1O15033 823 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 ATE1O95260 518 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 HSP90AB1P08238 724 aaKnown RBP6.06□□□□□ -1.44
NIPBL-204ENST00000504430 CKMT1AP12532 417 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 IL4RP24394 825 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 PTGIRP43119 386 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 UBASH3AP57075 661 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 NTRK3Q16288 839 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 IQCEQ6IPM2 695 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 GALNT13Q8IUC8 556 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 ESX1Q8N693 406 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 OR2W6PQ8NHA6 318 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 TTC17Q96AE7 1141 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 HAUS7Q99871 368 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 C22orf23Q9BZE7 217 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 DBNDD1Q9H9R9 158 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 PLEKHA5Q9HAU0 1116 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.06□□□□□ -1.44
NIPBL-204ENST00000504430 DACH1Q9UI36 760 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 HCN2Q9UL51 889 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 CORO2BQ9UQ03 480 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 FSD2A1L4K1 749 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 WDR64B1ANS9 1081 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 ZBTB48P10074 688 aaPredicted RBP6.06□□□□□ -1.44
NIPBL-204ENST00000504430 ALAS1P13196 640 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 PLCG1P19174 1290 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 POU3F2P20265 443 aaPredicted RBP6.06□□□□□ -1.44
NIPBL-204ENST00000504430 IFT88Q13099 833 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 HSP90AA2PQ14568 343 aaPredicted RBP6.06□□□□□ -1.44
NIPBL-204ENST00000504430 ADAT2Q7Z6V5 191 aaKnown RBP6.06□□□□□ -1.44
NIPBL-204ENST00000504430 AHI1Q8N157 1196 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 FAM167BQ9BTA0 163 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 RASSF4Q9H2L5 321 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 ELAC1Q9H777 363 aaKnown RBP6.06□□□□□ -1.44
NIPBL-204ENST00000504430 STRN4Q9NRL3 753 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 RASSF1Q9NS23 344 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 SERPINB13Q9UIV8 391 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 PNMA8BQ9ULN7 279 aaPredicted RBP6.06□□□□□ -1.44
NIPBL-204ENST00000504430 PCDHGB5Q9Y5G0 923 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 SMARCA1P28370 1054 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 IGFALSP35858 605 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 TNNT2P45379 298 aaPredicted RBP6.05□□□□□ -1.44
NIPBL-204ENST00000504430 IRX3P78415 501 aaPredicted RBP6.05□□□□□ -1.44
NIPBL-204ENST00000504430 KLF1Q13351 362 aaPredicted RBP6.05□□□□□ -1.44
NIPBL-204ENST00000504430 KCNT2Q6UVM3 1135 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 CHST15Q7LFX5 561 aaPredicted RBP6.05□□□□□ -1.44
NIPBL-204ENST00000504430 TMEM192Q8IY95 271 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 MICALL1Q8N3F8 863 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 RIN2Q8WYP3 895 aaPredicted RBP6.05□□□□□ -1.44
NIPBL-204ENST00000504430 SLC6A18Q96N87 628 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 GPATCH1Q9BRR8 931 aaKnown RBP6.05□□□□□ -1.44
NIPBL-204ENST00000504430 VPS11Q9H270 941 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 TOPORSQ9NS56 1045 aaPredicted RBP6.05□□□□□ -1.44
NIPBL-204ENST00000504430 EDARQ9UNE0 448 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 SMC3Q9UQE7 1217 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 PRAMEF27A3QJZ7 478 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 HRO43593 1189 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 OSMP13725 252 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 MUTP22033 750 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 DSG1Q02413 1049 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 SART3Q15020 963 aaKnown RBP6.05□□□□□ -1.44
NIPBL-204ENST00000504430 UVSSAQ2YD98 709 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 ZNF697Q5TEC3 545 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 LMBR1LQ6UX01 489 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 MFSD6Q6ZSS7 791 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 TRMT2AQ8IZ69 625 aaKnown RBP6.05□□□□□ -1.44
NIPBL-204ENST00000504430 IGSF22Q8N9C0 903 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 RUBCNLQ9H714 662 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 TCF7L1Q9HCS4 588 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 DCAF16Q9NXF7 216 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 GRHPRQ9UBQ7 328 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 MEIS3P2A8K0S8 358 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 DLX3O60479 287 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 TPM2P07951 284 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 VEGFAP15692 232 aaPredicted RBP6.05□□□□□ -1.44
NIPBL-204ENST00000504430 TATP17735 454 aaPredicted RBP6.05□□□□□ -1.44
NIPBL-204ENST00000504430 NFKB1P19838 968 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 CTNNA1P35221 906 aaKnown RBP6.05□□□□□ -1.44
NIPBL-204ENST00000504430 GRK6P43250 576 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 GTF2H3Q13889 308 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 CCNG2Q16589 344 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 TJAP1Q5JTD0 557 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 PTRH1Q86Y79 214 aaKnown RBP6.05□□□□□ -1.44
NIPBL-204ENST00000504430 TMTC1Q8IUR5 882 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 LIX1LQ8IVB5 337 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 BRSK2Q8IWQ3 736 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 PPM1NQ8N819 430 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 GSTCDQ8NEC7 633 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 DIO2Q92813 273 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 NXPE3Q969Y0 559 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 JAKMIP2Q96AA8 810 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 IGFLR1Q9H665 355 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 MARK1Q9P0L2 795 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 PCDHA4Q9UN74 947 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 GIT1Q9Y2X7 761 aa6.05□□□□□ -1.44
NIPBL-204ENST00000504430 GNASQ5JWF2 1037 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 CCDC158Q5M9N0 1113 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms