RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 TET1Q8NFU7 2136 aa16.22■□□□□ 0.19
PDLIM7-211ENST00000504318 B4DLN1 442 aa16.22■□□□□ 0.19
PDLIM7-211ENST00000504318 TLR3O15455 904 aaKnown RBP16.22■□□□□ 0.19
PDLIM7-211ENST00000504318 MRPL12P52815 198 aaKnown RBP16.22■□□□□ 0.19
PDLIM7-211ENST00000504318 NBPF20Q3BBV1 942 aa16.22■□□□□ 0.19
PDLIM7-211ENST00000504318 ARHGEF16Q5VV41 709 aa16.22■□□□□ 0.19
PDLIM7-211ENST00000504318 PPP1R13LQ8WUF5 828 aa16.22■□□□□ 0.19
PDLIM7-211ENST00000504318 AFG1LQ8WV93 481 aa16.22■□□□□ 0.19
PDLIM7-211ENST00000504318 GPKOWQ92917 476 aaPredicted RBP eCLIP16.22■□□□□ 0.19
PDLIM7-211ENST00000504318 MTG1Q9BT17 334 aaPredicted RBP16.22■□□□□ 0.19
PDLIM7-211ENST00000504318 TTYH1Q9H313 450 aaPredicted RBP16.22■□□□□ 0.19
PDLIM7-211ENST00000504318 TRMT13Q9NUP7 481 aaKnown RBP16.22■□□□□ 0.19
PDLIM7-211ENST00000504318 GBF1Q92538 1859 aa16.22■□□□□ 0.19
PDLIM7-211ENST00000504318 TRIP12Q14669 1992 aaPredicted RBP16.22■□□□□ 0.19
PDLIM7-211ENST00000504318 CHD9Q3L8U1 2897 aa16.21■□□□□ 0.19
PDLIM7-211ENST00000504318 MEIS2O14770 477 aa16.21■□□□□ 0.19
PDLIM7-211ENST00000504318 CDC45O75419 566 aa16.21■□□□□ 0.19
PDLIM7-211ENST00000504318 GH1P01241 217 aa16.21■□□□□ 0.19
PDLIM7-211ENST00000504318 MYL3P08590 195 aa16.21■□□□□ 0.19
PDLIM7-211ENST00000504318 RXRAP19793 462 aa16.21■□□□□ 0.19
PDLIM7-211ENST00000504318 MRPS9P82933 396 aaKnown RBP16.21■□□□□ 0.19
PDLIM7-211ENST00000504318 SP2Q02086 613 aa16.21■□□□□ 0.19
PDLIM7-211ENST00000504318 SEMA3FQ13275 785 aa16.21■□□□□ 0.19
PDLIM7-211ENST00000504318 NFRKBQ6P4R8 1299 aa16.21■□□□□ 0.19
PDLIM7-211ENST00000504318 CASC1Q6TDU7 716 aa16.21■□□□□ 0.19
PDLIM7-211ENST00000504318 RNPC3Q96LT9 517 aaKnown RBP16.21■□□□□ 0.19
PDLIM7-211ENST00000504318 HIPK3Q9H422 1215 aa16.21■□□□□ 0.19
PDLIM7-211ENST00000504318 ACRP10323 421 aa16.2■□□□□ 0.18
PDLIM7-211ENST00000504318 FUT2Q10981 343 aa16.2■□□□□ 0.18
PDLIM7-211ENST00000504318 PPIGQ13427 754 aaKnown RBP eCLIP16.2■□□□□ 0.182e-7■■■□□ 18
PDLIM7-211ENST00000504318 TMTC3Q6ZXV5 915 aa16.2■□□□□ 0.18
PDLIM7-211ENST00000504318 SESTD1Q86VW0 696 aa16.2■□□□□ 0.18
PDLIM7-211ENST00000504318 CMTR1Q8N1G2 835 aaKnown RBP16.2■□□□□ 0.18
PDLIM7-211ENST00000504318 TMTC2Q8N394 836 aa16.2■□□□□ 0.18
PDLIM7-211ENST00000504318 BCAS3Q9H6U6 928 aa16.2■□□□□ 0.18
PDLIM7-211ENST00000504318 STXBP5LQ9Y2K9 1186 aa16.2■□□□□ 0.18
PDLIM7-211ENST00000504318 GCOM1H8Y6P7 765 aaPredicted RBP16.19■□□□□ 0.18
PDLIM7-211ENST00000504318 HAS3O00219 553 aa16.19■□□□□ 0.18
PDLIM7-211ENST00000504318 PIK3CDO00329 1044 aa16.19■□□□□ 0.18
PDLIM7-211ENST00000504318 KPNA6O60684 536 aa16.19■□□□□ 0.18
PDLIM7-211ENST00000504318 POLR2MP0CAP2 368 aa16.19■□□□□ 0.18
PDLIM7-211ENST00000504318 CYP2C9P11712 490 aa16.19■□□□□ 0.18
PDLIM7-211ENST00000504318 KIF5BP33176 963 aa16.19■□□□□ 0.18
PDLIM7-211ENST00000504318 PTPN11Q06124 597 aaPredicted RBP16.19■□□□□ 0.18
PDLIM7-211ENST00000504318 MYSM1Q5VVJ2 828 aa16.19■□□□□ 0.18
PDLIM7-211ENST00000504318 ZNF365Q70YC5 407 aa16.19■□□□□ 0.18
PDLIM7-211ENST00000504318 RAB11FIP4Q86YS3 637 aa16.19■□□□□ 0.18
PDLIM7-211ENST00000504318 TMEM199Q8N511 208 aa16.19■□□□□ 0.18
PDLIM7-211ENST00000504318 PPTC7Q8NI37 304 aa16.19■□□□□ 0.18
PDLIM7-211ENST00000504318 CTCFLQ8NI51 663 aaPredicted RBP16.19■□□□□ 0.18
PDLIM7-211ENST00000504318 PIBF1Q8WXW3 757 aa16.19■□□□□ 0.18
PDLIM7-211ENST00000504318 ZFP91Q96JP5 570 aaPredicted RBP16.19■□□□□ 0.18
PDLIM7-211ENST00000504318 INPP4AQ96PE3 977 aaPredicted RBP16.19■□□□□ 0.18
PDLIM7-211ENST00000504318 IL23AQ9NPF7 189 aa16.19■□□□□ 0.18
PDLIM7-211ENST00000504318 FAM217BQ9NTX9 383 aaPredicted RBP16.19■□□□□ 0.18
PDLIM7-211ENST00000504318 BRPF3Q9ULD4 1205 aa16.19■□□□□ 0.18
PDLIM7-211ENST00000504318 PTPRSQ13332 1948 aa16.19■□□□□ 0.18
PDLIM7-211ENST00000504318 CNTNAP5Q8WYK1 1306 aa16.19■□□□□ 0.18
PDLIM7-211ENST00000504318 UBA1P22314 1058 aaKnown RBP16.18■□□□□ 0.18
PDLIM7-211ENST00000504318 ICAM3P32942 547 aa16.18■□□□□ 0.18
PDLIM7-211ENST00000504318 CCL23P55773 120 aa16.18■□□□□ 0.18
PDLIM7-211ENST00000504318 TRAF1Q13077 416 aa16.18■□□□□ 0.18
PDLIM7-211ENST00000504318 APOA5Q6Q788 366 aa16.18■□□□□ 0.18
PDLIM7-211ENST00000504318 FANCBQ8NB91 859 aa16.18■□□□□ 0.18
PDLIM7-211ENST00000504318 HERVK_113Q902F9 699 aa16.18■□□□□ 0.18
PDLIM7-211ENST00000504318 TCEANC2Q96MN5 208 aa16.18■□□□□ 0.18
PDLIM7-211ENST00000504318 NEK1Q96PY6 1258 aa16.18■□□□□ 0.18
PDLIM7-211ENST00000504318 LZTS2Q9BRK4 669 aa16.18■□□□□ 0.18
PDLIM7-211ENST00000504318 SEMA6BQ9H3T3 888 aa16.18■□□□□ 0.18
PDLIM7-211ENST00000504318 CXXC1Q9P0U4 656 aaPredicted RBP16.18■□□□□ 0.18
PDLIM7-211ENST00000504318 CHD7Q9P2D1 2997 aa16.18■□□□□ 0.18
PDLIM7-211ENST00000504318 CCDC69A6NI79 296 aa16.17■□□□□ 0.18
PDLIM7-211ENST00000504318 F2P00734 622 aa16.17■□□□□ 0.18
PDLIM7-211ENST00000504318 MYCLP12524 364 aaPredicted RBP16.17■□□□□ 0.18
PDLIM7-211ENST00000504318 HIC1Q14526 733 aa16.17■□□□□ 0.18
PDLIM7-211ENST00000504318 GPNMBQ14956 572 aa16.17■□□□□ 0.18
PDLIM7-211ENST00000504318 HSDL1Q3SXM5 330 aa16.17■□□□□ 0.18
PDLIM7-211ENST00000504318 CELF3Q5SZQ8 465 aaKnown RBP16.17■□□□□ 0.18
PDLIM7-211ENST00000504318 TYW1BQ6NUM6 668 aa16.17■□□□□ 0.18
PDLIM7-211ENST00000504318 PSRC1Q6PGN9 363 aaPredicted RBP16.17■□□□□ 0.18
PDLIM7-211ENST00000504318 USP17L6PQ6QN14 398 aa16.17■□□□□ 0.18
PDLIM7-211ENST00000504318 DHX32Q7L7V1 743 aaKnown RBP16.17■□□□□ 0.18
PDLIM7-211ENST00000504318 FCHSD1Q86WN1 690 aa16.17■□□□□ 0.18
PDLIM7-211ENST00000504318 DHX38Q92620 1227 aaKnown RBP16.17■□□□□ 0.18
PDLIM7-211ENST00000504318 RRP36Q96EU6 259 aaKnown RBP16.17■□□□□ 0.18
PDLIM7-211ENST00000504318 SCLYQ96I15 445 aa16.17■□□□□ 0.18
PDLIM7-211ENST00000504318 TELO2Q9Y4R8 837 aa16.17■□□□□ 0.18
PDLIM7-211ENST00000504318 MRVI1Q9Y6F6 885 aa16.17■□□□□ 0.18
PDLIM7-211ENST00000504318 UNC80Q8N2C7 3258 aa16.17■□□□□ 0.18
PDLIM7-211ENST00000504318 TMEM265A0A087WTH1 108 aa16.16■□□□□ 0.18
PDLIM7-211ENST00000504318 hCG_1642624A0A1W2PR95 340 aa16.16■□□□□ 0.18
PDLIM7-211ENST00000504318 RBAK-RBAKDNI3L0D1 243 aa16.16■□□□□ 0.18
PDLIM7-211ENST00000504318 CALM1P0DP23 149 aa16.16■□□□□ 0.18
PDLIM7-211ENST00000504318 CALM2P0DP24 149 aa16.16■□□□□ 0.18
PDLIM7-211ENST00000504318 CALM3P0DP25 149 aa16.16■□□□□ 0.18
PDLIM7-211ENST00000504318 TGFB3P10600 412 aa16.16■□□□□ 0.18
PDLIM7-211ENST00000504318 CCND2P30279 289 aa16.16■□□□□ 0.18
PDLIM7-211ENST00000504318 HOXC8P31273 242 aa16.16■□□□□ 0.18
PDLIM7-211ENST00000504318 HSPA4P34932 840 aa16.16■□□□□ 0.18
PDLIM7-211ENST00000504318 GNAQP50148 359 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms