RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 MTA3Q9BTC8 594 aa3.85□□□□□ -1.79
HMGB3P17-201ENST00000504195 GP6Q9HCN6 339 aa3.85□□□□□ -1.79
HMGB3P17-201ENST00000504195 PARP2Q9UGN5 583 aa3.85□□□□□ -1.79
HMGB3P17-201ENST00000504195 ANKRD33BA6NCL7 494 aa3.84□□□□□ -1.79
HMGB3P17-201ENST00000504195 CTSHP09668 335 aa3.84□□□□□ -1.79
HMGB3P17-201ENST00000504195 ITGA4P13612 1032 aa3.84□□□□□ -1.79
HMGB3P17-201ENST00000504195 CD247P20963 164 aa3.84□□□□□ -1.79
HMGB3P17-201ENST00000504195 XPCQ01831 940 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P17-201ENST00000504195 FBXL19Q6PCT2 694 aa3.84□□□□□ -1.79
HMGB3P17-201ENST00000504195 TMC4Q7Z404 712 aa3.84□□□□□ -1.79
HMGB3P17-201ENST00000504195 KLHL36Q8N4N3 616 aa3.84□□□□□ -1.79
HMGB3P17-201ENST00000504195 MBD6Q96DN6 1003 aa3.84□□□□□ -1.79
HMGB3P17-201ENST00000504195 YTHDC1Q96MU7 727 aaKnown RBP3.84□□□□□ -1.79
HMGB3P17-201ENST00000504195 PLEKHG4BQ96PX9 1271 aa3.84□□□□□ -1.79
HMGB3P17-201ENST00000504195 WRNIP1Q96S55 665 aa3.84□□□□□ -1.79
HMGB3P17-201ENST00000504195 SLC9A7Q96T83 725 aa3.84□□□□□ -1.79
HMGB3P17-201ENST00000504195 SYT3Q9BQG1 590 aa3.84□□□□□ -1.79
HMGB3P17-201ENST00000504195 IFNGR1P15260 489 aa3.83□□□□□ -1.8
HMGB3P17-201ENST00000504195 EIF4A3P38919 411 aaKnown RBP3.83□□□□□ -1.8
HMGB3P17-201ENST00000504195 GK5Q6ZS86 529 aa3.83□□□□□ -1.8
HMGB3P17-201ENST00000504195 C1orf210Q8IVY1 113 aa3.83□□□□□ -1.8
HMGB3P17-201ENST00000504195 GIMAP8Q8ND71 665 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P17-201ENST00000504195 SEC14L1Q92503 715 aa3.83□□□□□ -1.8
HMGB3P17-201ENST00000504195 RNF34Q969K3 372 aa3.83□□□□□ -1.8
HMGB3P17-201ENST00000504195 SEC61A2Q9H9S3 476 aa3.83□□□□□ -1.8
HMGB3P17-201ENST00000504195 BARX1Q9HBU1 254 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P17-201ENST00000504195 C9IYK1 514 aa3.82□□□□□ -1.8
HMGB3P17-201ENST00000504195 NPHS1O60500 1241 aa3.82□□□□□ -1.8
HMGB3P17-201ENST00000504195 NTRK1P04629 796 aa3.82□□□□□ -1.8
HMGB3P17-201ENST00000504195 PAMP19021 973 aa3.82□□□□□ -1.8
HMGB3P17-201ENST00000504195 IL13P35225 146 aa3.82□□□□□ -1.8
HMGB3P17-201ENST00000504195 SEPHS1P49903 392 aa3.82□□□□□ -1.8
HMGB3P17-201ENST00000504195 NKX3-2P78367 333 aa3.82□□□□□ -1.8
HMGB3P17-201ENST00000504195 TUBA3CQ13748 450 aa3.82□□□□□ -1.8
HMGB3P17-201ENST00000504195 TCEAL1Q15170 157 aa3.82□□□□□ -1.8
HMGB3P17-201ENST00000504195 ZNF362Q5T0B9 420 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P17-201ENST00000504195 TUBA3EQ6PEY2 450 aa3.82□□□□□ -1.8
HMGB3P17-201ENST00000504195 FAM126BQ8IXS8 530 aa3.82□□□□□ -1.8
HMGB3P17-201ENST00000504195 TAB3Q8N5C8 712 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P17-201ENST00000504195 ZNF483Q8TF39 744 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P17-201ENST00000504195 LARP4BQ92615 738 aaKnown RBP3.82□□□□□ -1.8
HMGB3P17-201ENST00000504195 BRF1Q92994 677 aa3.82□□□□□ -1.8
HMGB3P17-201ENST00000504195 PRRX2Q99811 253 aa3.82□□□□□ -1.8
HMGB3P17-201ENST00000504195 TRAIPQ9BWF2 469 aa3.82□□□□□ -1.8
HMGB3P17-201ENST00000504195 NOL6Q9H6R4 1146 aaKnown RBP3.82□□□□□ -1.8
HMGB3P17-201ENST00000504195 MMRN2Q9H8L6 949 aa3.82□□□□□ -1.8
HMGB3P17-201ENST00000504195 RNF19AQ9NV58 838 aa3.82□□□□□ -1.8
HMGB3P17-201ENST00000504195 PTGFRNQ9P2B2 879 aa3.82□□□□□ -1.8
HMGB3P17-201ENST00000504195 GULP1Q9UBP9 304 aa3.82□□□□□ -1.8
HMGB3P17-201ENST00000504195 FTSJ1Q9UET6 329 aa3.82□□□□□ -1.8
HMGB3P17-201ENST00000504195 ZDHHC9Q9Y397 364 aa3.82□□□□□ -1.8
HMGB3P17-201ENST00000504195 AURKAO14965 403 aa3.81□□□□□ -1.8
HMGB3P17-201ENST00000504195 FOXS1O43638 330 aa3.81□□□□□ -1.8
HMGB3P17-201ENST00000504195 C1SP09871 688 aa3.81□□□□□ -1.8
HMGB3P17-201ENST00000504195 COMTP21964 271 aa3.81□□□□□ -1.8
HMGB3P17-201ENST00000504195 MCM4P33991 863 aa3.81□□□□□ -1.8
HMGB3P17-201ENST00000504195 CLCQ05315 142 aa3.81□□□□□ -1.8
HMGB3P17-201ENST00000504195 TCTN3Q6NUS6 607 aa3.81□□□□□ -1.8
HMGB3P17-201ENST00000504195 EDAQ92838 391 aa3.81□□□□□ -1.8
HMGB3P17-201ENST00000504195 CLIC6Q96NY7 704 aa3.81□□□□□ -1.8
HMGB3P17-201ENST00000504195 GNRHR2Q96P88 292 aa3.81□□□□□ -1.8
HMGB3P17-201ENST00000504195 ADARB2Q9NS39 739 aaKnown RBP3.81□□□□□ -1.8
HMGB3P17-201ENST00000504195 KBTBD4Q9NVX7 518 aa3.81□□□□□ -1.8
HMGB3P17-201ENST00000504195 FBLN5Q9UBX5 448 aa3.81□□□□□ -1.8
HMGB3P17-201ENST00000504195 U2SURPO15042 1029 aaKnown RBP3.8□□□□□ -1.8
HMGB3P17-201ENST00000504195 SORBS3O60504 671 aa3.8□□□□□ -1.8
HMGB3P17-201ENST00000504195 PPP1R11O60927 126 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P17-201ENST00000504195 ONECUT2O95948 504 aa3.8□□□□□ -1.8
HMGB3P17-201ENST00000504195 IMPDH2P12268 514 aa3.8□□□□□ -1.8
HMGB3P17-201ENST00000504195 SLC6A11P48066 632 aa3.8□□□□□ -1.8
HMGB3P17-201ENST00000504195 NFATC3Q12968 1075 aa3.8□□□□□ -1.8
HMGB3P17-201ENST00000504195 ADAM9Q13443 819 aa3.8□□□□□ -1.8
HMGB3P17-201ENST00000504195 SEZ6Q53EL9 994 aa3.8□□□□□ -1.8
HMGB3P17-201ENST00000504195 DCAF15Q66K64 600 aa3.8□□□□□ -1.8
HMGB3P17-201ENST00000504195 SND1Q7KZF4 910 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB3P17-201ENST00000504195 FAM26EQ8N5C1 309 aa3.8□□□□□ -1.8
HMGB3P17-201ENST00000504195 ZDHHC15Q96MV8 337 aa3.8□□□□□ -1.8
HMGB3P17-201ENST00000504195 MRS2Q9HD23 443 aa3.8□□□□□ -1.8
HMGB3P17-201ENST00000504195 BACE2Q9Y5Z0 518 aa3.8□□□□□ -1.8
HMGB3P17-201ENST00000504195 NPHP3-ACAD11A0A0J9YXS1 232 aa3.79□□□□□ -1.8
HMGB3P17-201ENST00000504195 MASP2O00187 686 aa3.79□□□□□ -1.8
HMGB3P17-201ENST00000504195 SGSM2O43147 1006 aa3.79□□□□□ -1.8
HMGB3P17-201ENST00000504195 FUCA1P04066 466 aa3.79□□□□□ -1.8
HMGB3P17-201ENST00000504195 CDK4P11802 303 aa3.79□□□□□ -1.8
HMGB3P17-201ENST00000504195 APOBRQ0VD83 1088 aa3.79□□□□□ -1.8
HMGB3P17-201ENST00000504195 AXDND1Q5T1B0 1012 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P17-201ENST00000504195 PCSK4Q6UW60 755 aa3.79□□□□□ -1.8
HMGB3P17-201ENST00000504195 ERMP1Q7Z2K6 904 aa3.79□□□□□ -1.8
HMGB3P17-201ENST00000504195 CACTINQ8WUQ7 758 aaKnown RBP3.79□□□□□ -1.8
HMGB3P17-201ENST00000504195 ZNF296Q8WUU4 475 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P17-201ENST00000504195 LRRC37BQ96QE4 947 aa3.79□□□□□ -1.8
HMGB3P17-201ENST00000504195 LMF1Q96S06 567 aa3.79□□□□□ -1.8
HMGB3P17-201ENST00000504195 YIPF4Q9BSR8 244 aa3.79□□□□□ -1.8
HMGB3P17-201ENST00000504195 TTPALQ9BTX7 342 aa3.79□□□□□ -1.8
HMGB3P17-201ENST00000504195 WHRNQ9P202 907 aa3.79□□□□□ -1.8
HMGB3P17-201ENST00000504195 REXO2Q9Y3B8 237 aaKnown RBP3.79□□□□□ -1.8
HMGB3P17-201ENST00000504195 SIT1Q9Y3P8 196 aa3.79□□□□□ -1.8
HMGB3P17-201ENST00000504195 C7orf72A4D263 438 aa3.78□□□□□ -1.8
HMGB3P17-201ENST00000504195 C2orf71A6NGG8 1288 aa3.78□□□□□ -1.8
HMGB3P17-201ENST00000504195 PROB1E7EW31 1015 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 211.7 ms