RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 MAP7D3Q8IWC1 876 aa18.02■□□□□ 0.48
PCDHA1-203ENST00000504120 ACCSQ96QU6 501 aa18.02■□□□□ 0.48
PCDHA1-203ENST00000504120 PIGSQ96S52 555 aa18.02■□□□□ 0.48
PCDHA1-203ENST00000504120 FAM114A2Q9NRY5 505 aa18.02■□□□□ 0.48
PCDHA1-203ENST00000504120 ZSWIM5Q9P217 1185 aa18.02■□□□□ 0.48
PCDHA1-203ENST00000504120 ANKFY1Q9P2R3 1169 aa18.02■□□□□ 0.48
PCDHA1-203ENST00000504120 ATP1A2P50993 1020 aa18.02■□□□□ 0.48
PCDHA1-203ENST00000504120 SEPT6Q14141 434 aa18.02■□□□□ 0.48
PCDHA1-203ENST00000504120 MAP3K21Q5TCX8 1036 aa18.02■□□□□ 0.48
PCDHA1-203ENST00000504120 DHX36Q9H2U1 1008 aaKnown RBP18.02■□□□□ 0.48
PCDHA1-203ENST00000504120 BAIAP2L1Q9UHR4 511 aa18.02■□□□□ 0.48
PCDHA1-203ENST00000504120 PI4K2BQ8TCG2 481 aa18.02■□□□□ 0.48
PCDHA1-203ENST00000504120 NACC1Q96RE7 527 aa18.02■□□□□ 0.48
PCDHA1-203ENST00000504120 JPH2Q9BR39 696 aaPredicted RBP18.02■□□□□ 0.48
PCDHA1-203ENST00000504120 SASH1O94885 1247 aa18.02■□□□□ 0.47
PCDHA1-203ENST00000504120 SERPINB2P05120 415 aa18.02■□□□□ 0.47
PCDHA1-203ENST00000504120 NR5A1Q13285 461 aa18.02■□□□□ 0.47
PCDHA1-203ENST00000504120 RINT1Q6NUQ1 792 aa18.02■□□□□ 0.47
PCDHA1-203ENST00000504120 PPP1R2P3Q6NXS1 205 aa18.02■□□□□ 0.47
PCDHA1-203ENST00000504120 EEF2KMTQ96G04 330 aa18.02■□□□□ 0.47
PCDHA1-203ENST00000504120 PALM3A6NDB9 673 aaPredicted RBP18.01■□□□□ 0.47
PCDHA1-203ENST00000504120 ABCD1P33897 745 aa18.01■□□□□ 0.47
PCDHA1-203ENST00000504120 USP14P54578 494 aa18.01■□□□□ 0.47
PCDHA1-203ENST00000504120 PSMD2Q13200 908 aa18.01■□□□□ 0.47
PCDHA1-203ENST00000504120 CC2D2BQ6DHV5 1058 aa18.01■□□□□ 0.47
PCDHA1-203ENST00000504120 SEPT14Q6ZU15 432 aa18.01■□□□□ 0.47
PCDHA1-203ENST00000504120 KCTD1Q719H9 257 aa18.01■□□□□ 0.47
PCDHA1-203ENST00000504120 THAP9Q9H5L6 903 aa18.01■□□□□ 0.47
PCDHA1-203ENST00000504120 SORBS3O60504 671 aa18.01■□□□□ 0.47
PCDHA1-203ENST00000504120 SF3A3Q12874 501 aaKnown RBP eCLIP18.01■□□□□ 0.47
PCDHA1-203ENST00000504120 SMYD4Q8IYR2 804 aaPredicted RBP18.01■□□□□ 0.47
PCDHA1-203ENST00000504120 BCAS4Q8TDM0 211 aa18.01■□□□□ 0.47
PCDHA1-203ENST00000504120 TMEM206Q9H813 350 aa18.01■□□□□ 0.47
PCDHA1-203ENST00000504120 EIF3CLB5ME19 914 aaKnown RBP18.01■□□□□ 0.47
PCDHA1-203ENST00000504120 PI16Q6UXB8 463 aa18.01■□□□□ 0.47
PCDHA1-203ENST00000504120 EIF3CQ99613 913 aaKnown RBP18.01■□□□□ 0.47
PCDHA1-203ENST00000504120 CDC42BPGQ6DT37 1551 aa18.01■□□□□ 0.47
PCDHA1-203ENST00000504120 EAPPQ56P03 285 aaPredicted RBP18.01■□□□□ 0.47
PCDHA1-203ENST00000504120 RNF14Q9UBS8 474 aa18.01■□□□□ 0.47
PCDHA1-203ENST00000504120 E9PCH4 1651 aa18.01■□□□□ 0.47
PCDHA1-203ENST00000504120 MESDQ14696 234 aa18■□□□□ 0.47
PCDHA1-203ENST00000504120 DCPSQ96C86 337 aaKnown RBP18■□□□□ 0.47
PCDHA1-203ENST00000504120 COBLO75128 1261 aa18■□□□□ 0.47
PCDHA1-203ENST00000504120 SULF1Q8IWU6 871 aa18■□□□□ 0.47
PCDHA1-203ENST00000504120 SPICE1Q8N0Z3 855 aa18■□□□□ 0.47
PCDHA1-203ENST00000504120 CACTINQ8WUQ7 758 aaKnown RBP18■□□□□ 0.47
PCDHA1-203ENST00000504120 FTOQ9C0B1 505 aaKnown RBP eCLIP18■□□□□ 0.47
PCDHA1-203ENST00000504120 BCORL1Q5H9F3 1711 aa18■□□□□ 0.47
PCDHA1-203ENST00000504120 BMP3P12645 472 aa18■□□□□ 0.47
PCDHA1-203ENST00000504120 CCNE1P24864 410 aa18■□□□□ 0.47
PCDHA1-203ENST00000504120 DPY19L2Q6NUT2 758 aa18■□□□□ 0.47
PCDHA1-203ENST00000504120 CCDC170Q8IYT3 715 aa18■□□□□ 0.47
PCDHA1-203ENST00000504120 SLC7A3Q8WY07 619 aa18■□□□□ 0.47
PCDHA1-203ENST00000504120 SEPT9Q9UHD8 586 aaPredicted RBP18■□□□□ 0.47
PCDHA1-203ENST00000504120 IRX4P78413 519 aa18■□□□□ 0.47
PCDHA1-203ENST00000504120 FAM47CQ5HY64 1035 aa18■□□□□ 0.47
PCDHA1-203ENST00000504120 PDE11AQ9HCR9 933 aa18■□□□□ 0.47
PCDHA1-203ENST00000504120 PCDHB4Q9Y5E5 795 aa18■□□□□ 0.47
PCDHA1-203ENST00000504120 LAMC1P11047 1609 aa17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 MED14O60244 1454 aa17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 ADGRL3Q9HAR2 1447 aa17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 EPHB4P54760 987 aa17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 LRRC41Q15345 812 aa17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 ARL6IP4Q66PJ3 421 aaKnown RBP17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 VSTM4Q8IW00 320 aa17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 GRAMD1CQ8IYS0 662 aa17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 MAGOHBQ96A72 148 aaKnown RBP17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 ENC1O14682 589 aa17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 CAPN7Q9Y6W3 813 aa17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 H7C1W4 665 aa17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 XPOTO43592 962 aaKnown RBP17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 ZBED6P86452 979 aa17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 KCTD2Q14681 263 aa17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 RPS6KA2Q15349 733 aa17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 NAA35Q5VZE5 725 aa17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 PHLDB3Q6NSJ2 640 aa17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 IFT122Q9HBG6 1241 aa17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 STK38LQ9Y2H1 464 aa17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 NCAPD2Q15021 1401 aa17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 LARGE1O95461 756 aa17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 C10orf76Q5T2E6 689 aa17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 KAZNQ674X7 775 aa17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 FAM196AQ6ZSG2 479 aa17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 CDKL2Q92772 493 aa17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 CDHR1Q96JP9 859 aa17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 TRPC5Q9UL62 973 aaPredicted RBP17.99■□□□□ 0.47
PCDHA1-203ENST00000504120 TLR3O15455 904 aaKnown RBP17.98■□□□□ 0.47
PCDHA1-203ENST00000504120 RNF169Q8NCN4 708 aa17.98■□□□□ 0.47
PCDHA1-203ENST00000504120 ANO3Q9BYT9 981 aa17.98■□□□□ 0.47
PCDHA1-203ENST00000504120 PIH1D3Q9NQM4 214 aaKnown RBP17.98■□□□□ 0.47
PCDHA1-203ENST00000504120 KMT5AQ9NQR1 393 aa17.98■□□□□ 0.47
PCDHA1-203ENST00000504120 A6NJR5 290 aa17.98■□□□□ 0.47
PCDHA1-203ENST00000504120 LPXNO60711 386 aa17.98■□□□□ 0.47
PCDHA1-203ENST00000504120 EXOC8Q8IYI6 725 aa17.98■□□□□ 0.47
PCDHA1-203ENST00000504120 MIPOL1Q8TD10 442 aa17.98■□□□□ 0.47
PCDHA1-203ENST00000504120 ABCA6Q8N139 1617 aa17.98■□□□□ 0.47
PCDHA1-203ENST00000504120 SLC16A2P36021 539 aa17.98■□□□□ 0.47
PCDHA1-203ENST00000504120 GARSP41250 739 aaKnown RBP17.98■□□□□ 0.47
PCDHA1-203ENST00000504120 RASGRF1Q13972 1273 aa17.98■□□□□ 0.47
PCDHA1-203ENST00000504120 MIS18BP1Q6P0N0 1132 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms