RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 CHST3Q7LGC8 479 aa12.52□□□□□ -0.41
SNCA-207ENST00000502987 FBXO11Q86XK2 927 aa12.52□□□□□ -0.41
SNCA-207ENST00000502987 MCF2L2Q86YR7 1114 aa12.52□□□□□ -0.41
SNCA-207ENST00000502987 ENAHQ8N8S7 591 aaPredicted RBP12.52□□□□□ -0.41
SNCA-207ENST00000502987 PPP1R13LQ8WUF5 828 aa12.52□□□□□ -0.41
SNCA-207ENST00000502987 PPM1EQ8WY54 764 aa12.52□□□□□ -0.41
SNCA-207ENST00000502987 TBC1D5Q92609 795 aa12.52□□□□□ -0.41
SNCA-207ENST00000502987 COPS5Q92905 334 aa12.52□□□□□ -0.41
SNCA-207ENST00000502987 SCLYQ96I15 445 aa12.52□□□□□ -0.41
SNCA-207ENST00000502987 NOC4LQ9BVI4 516 aaKnown RBP12.52□□□□□ -0.41
SNCA-207ENST00000502987 COL25A1Q9BXS0 654 aaPredicted RBP12.52□□□□□ -0.41
SNCA-207ENST00000502987 PBX4Q9BYU1 374 aa12.52□□□□□ -0.41
SNCA-207ENST00000502987 ALDH8A1Q9H2A2 487 aaPredicted RBP12.52□□□□□ -0.41
SNCA-207ENST00000502987 TRMT13Q9NUP7 481 aaKnown RBP12.52□□□□□ -0.41
SNCA-207ENST00000502987 NOD1Q9Y239 953 aa12.52□□□□□ -0.41
SNCA-207ENST00000502987 TNKSO95271 1327 aa12.52□□□□□ -0.41
SNCA-207ENST00000502987 ABCB11O95342 1321 aa12.52□□□□□ -0.41
SNCA-207ENST00000502987 GBF1Q92538 1859 aa12.51□□□□□ -0.41
SNCA-207ENST00000502987 MYH7BA7E2Y1 1941 aa12.51□□□□□ -0.41
SNCA-207ENST00000502987 PURAQ00577 322 aaKnown RBP12.51□□□□□ -0.41
SNCA-207ENST00000502987 TRDNQ13061 729 aa12.51□□□□□ -0.41
SNCA-207ENST00000502987 RAB30Q15771 203 aa12.51□□□□□ -0.41
SNCA-207ENST00000502987 NBPF20Q3BBV1 942 aa12.51□□□□□ -0.41
SNCA-207ENST00000502987 DEFB128Q7Z7B8 93 aa12.51□□□□□ -0.41
SNCA-207ENST00000502987 RETREG2Q8NC44 543 aa12.51□□□□□ -0.41
SNCA-207ENST00000502987 RGS22Q8NE09 1264 aa12.51□□□□□ -0.41
SNCA-207ENST00000502987 HERVK_113Q902F9 699 aa12.51□□□□□ -0.41
SNCA-207ENST00000502987 TAAR1Q96RJ0 339 aa12.51□□□□□ -0.41
SNCA-207ENST00000502987 MRPL11Q9Y3B7 192 aaKnown RBP12.51□□□□□ -0.41
SNCA-207ENST00000502987 SUPT16HQ9Y5B9 1047 aaKnown RBP12.51□□□□□ -0.41
SNCA-207ENST00000502987 SLC4A7Q9Y6M7 1214 aa12.51□□□□□ -0.41
SNCA-207ENST00000502987 CFBP00751 764 aa12.5□□□□□ -0.41
SNCA-207ENST00000502987 STXBP2Q15833 593 aa12.5□□□□□ -0.41
SNCA-207ENST00000502987 QRICH1Q2TAL8 776 aa12.5□□□□□ -0.41
SNCA-207ENST00000502987 ARHGEF16Q5VV41 709 aa12.5□□□□□ -0.41
SNCA-207ENST00000502987 NSUN6Q8TEA1 469 aaKnown RBP12.5□□□□□ -0.41
SNCA-207ENST00000502987 RUFY2Q8WXA3 655 aa12.5□□□□□ -0.41
SNCA-207ENST00000502987 ANKS1AQ92625 1134 aa12.5□□□□□ -0.41
SNCA-207ENST00000502987 RMDN3Q96TC7 470 aa12.5□□□□□ -0.41
SNCA-207ENST00000502987 WNT8AQ9H1J5 351 aa12.5□□□□□ -0.41
SNCA-207ENST00000502987 PRDM12Q9H4Q4 367 aa12.5□□□□□ -0.41
SNCA-207ENST00000502987 SLC28A3Q9HAS3 691 aa12.5□□□□□ -0.41
SNCA-207ENST00000502987 CXXC1Q9P0U4 656 aaPredicted RBP12.5□□□□□ -0.41
SNCA-207ENST00000502987 CDH23Q9H251 3354 aa12.5□□□□□ -0.41
SNCA-207ENST00000502987 CHD9Q3L8U1 2897 aa12.49□□□□□ -0.41
SNCA-207ENST00000502987 SCN5AQ14524 2016 aa12.49□□□□□ -0.41
SNCA-207ENST00000502987 TRIP12Q14669 1992 aaPredicted RBP12.49□□□□□ -0.41
SNCA-207ENST00000502987 KIAA1217Q5T5P2 1943 aa12.49□□□□□ -0.41
SNCA-207ENST00000502987 A6NJR5 290 aa12.49□□□□□ -0.41
SNCA-207ENST00000502987 GH1P01241 217 aa12.49□□□□□ -0.41
SNCA-207ENST00000502987 IGFBP4P22692 258 aa12.49□□□□□ -0.41
SNCA-207ENST00000502987 EDNRBP24530 442 aa12.49□□□□□ -0.41
SNCA-207ENST00000502987 LY6KQ17RY6 165 aa12.49□□□□□ -0.41
SNCA-207ENST00000502987 RASIP1Q5U651 963 aa12.49□□□□□ -0.41
SNCA-207ENST00000502987 SYTL5Q8TDW5 730 aaPredicted RBP12.49□□□□□ -0.41
SNCA-207ENST00000502987 IWS1Q96ST2 819 aa12.49□□□□□ -0.41
SNCA-207ENST00000502987 FTOQ9C0B1 505 aaKnown RBP eCLIP12.49□□□□□ -0.41
SNCA-207ENST00000502987 NKX2-4Q9H2Z4 354 aa12.49□□□□□ -0.41
SNCA-207ENST00000502987 JMJD4Q9H9V9 463 aa12.49□□□□□ -0.41
SNCA-207ENST00000502987 ERICH2A1L162 156 aa12.48□□□□□ -0.41
SNCA-207ENST00000502987 KLRF2D3W0D1 207 aa12.48□□□□□ -0.41
SNCA-207ENST00000502987 ARIH2O95376 493 aa12.48□□□□□ -0.41
SNCA-207ENST00000502987 MYCLP12524 364 aaPredicted RBP12.48□□□□□ -0.41
SNCA-207ENST00000502987 ACTN1P12814 892 aa12.48□□□□□ -0.41
SNCA-207ENST00000502987 EIF2AK2P19525 551 aaKnown RBP12.48□□□□□ -0.41
SNCA-207ENST00000502987 RABGGTBP53611 331 aa12.48□□□□□ -0.41
SNCA-207ENST00000502987 IRX6P78412 446 aaPredicted RBP12.48□□□□□ -0.41
SNCA-207ENST00000502987 CCDC85BQ15834 202 aaPredicted RBP12.48□□□□□ -0.41
SNCA-207ENST00000502987 NFRKBQ6P4R8 1299 aa12.48□□□□□ -0.41
SNCA-207ENST00000502987 STAG2Q8N3U4 1231 aa12.48□□□□□ -0.41
SNCA-207ENST00000502987 AFG1LQ8WV93 481 aa12.48□□□□□ -0.41
SNCA-207ENST00000502987 AMNQ9BXJ7 453 aa12.48□□□□□ -0.41
SNCA-207ENST00000502987 IFIT3O14879 490 aaKnown RBP12.47□□□□□ -0.41
SNCA-207ENST00000502987 ATP2A2P16615 1042 aaKnown RBP12.47□□□□□ -0.41
SNCA-207ENST00000502987 CASTP20810 708 aaKnown RBP12.47□□□□□ -0.41
SNCA-207ENST00000502987 BFSP2Q13515 415 aa12.47□□□□□ -0.41
SNCA-207ENST00000502987 PTGISQ16647 500 aa12.47□□□□□ -0.41
SNCA-207ENST00000502987 TTC22Q5TAA0 569 aa12.47□□□□□ -0.41
SNCA-207ENST00000502987 CYB5R4Q7L1T6 521 aa12.47□□□□□ -0.41
SNCA-207ENST00000502987 RALYLQ86SE5 291 aaKnown RBP12.47□□□□□ -0.41
SNCA-207ENST00000502987 HOMER1Q86YM7 354 aa12.47□□□□□ -0.41
SNCA-207ENST00000502987 MAF1Q9H063 256 aa12.47□□□□□ -0.41
SNCA-207ENST00000502987 COL20A1Q9P218 1284 aa12.47□□□□□ -0.41
SNCA-207ENST00000502987 PCDHA1Q9Y5I3 950 aa12.47□□□□□ -0.41
SNCA-207ENST00000502987 MRVI1Q9Y6F6 885 aa12.47□□□□□ -0.41
SNCA-207ENST00000502987 BAZ2BQ9UIF8 2168 aaKnown RBP12.47□□□□□ -0.41
SNCA-207ENST00000502987 SCN10AQ9Y5Y9 1956 aa12.47□□□□□ -0.41
SNCA-207ENST00000502987 SORBS3O60504 671 aa12.46□□□□□ -0.41
SNCA-207ENST00000502987 EIF3JO75822 258 aaKnown RBP12.46□□□□□ -0.41
SNCA-207ENST00000502987 NR3C2P08235 984 aa12.46□□□□□ -0.41
SNCA-207ENST00000502987 PFKMP08237 780 aa12.46□□□□□ -0.41
SNCA-207ENST00000502987 PDE4AP27815 886 aa12.46□□□□□ -0.41
SNCA-207ENST00000502987 PTPN11Q06124 597 aaPredicted RBP12.46□□□□□ -0.41
SNCA-207ENST00000502987 SART3Q15020 963 aaKnown RBP12.46□□□□□ -0.41
SNCA-207ENST00000502987 DGKDQ16760 1214 aa12.46□□□□□ -0.41
SNCA-207ENST00000502987 VARS2Q5ST30 1063 aaKnown RBP12.46□□□□□ -0.41
SNCA-207ENST00000502987 PPP2R2DQ66LE6 453 aa12.46□□□□□ -0.41
SNCA-207ENST00000502987 CCDC62Q6P9F0 684 aa12.46□□□□□ -0.41
SNCA-207ENST00000502987 DHX37Q8IY37 1157 aaKnown RBP12.46□□□□□ -0.41
SNCA-207ENST00000502987 CCDC155Q8N6L0 562 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms