RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 CNKSR3Q6P9H4 555 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 CHD1LQ86WJ1 897 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 HERC6Q8IVU3 1022 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 PLEKHM2Q8IWE5 1019 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 ADGRF4Q8IZF3 695 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 PPTC7Q8NI37 304 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 ADAMTS19Q8TE59 1207 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 KAT2BQ92831 832 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 RMDN3Q96TC7 470 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 C1QTNF1Q9BXJ1 281 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 AMNQ9BXJ7 453 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 KAT14Q9H8E8 782 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 JMJD4Q9H9V9 463 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 ZSWIM5Q9P217 1185 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 GTF2IRD1Q9UHL9 959 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 MICAL3Q7RTP6 2002 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 RALGAPA2Q2PPJ7 1873 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 COL4A4P53420 1690 aaPredicted RBP7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 EMSYQ7Z589 1322 aa7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 ZBBXA8MT70 800 aa7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 TRIM6-TRIM34B2RNG4 842 aa7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 CAND2O75155 1236 aa7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 KDM4AO75164 1064 aa7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 CA3P07451 260 aa7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 NR3C2P08235 984 aa7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 PARP1P09874 1014 aaKnown RBP7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 IGFBP4P22692 258 aa7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 PTGS1P23219 599 aa7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 HAND2P61296 217 aa7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 PTK7Q13308 1070 aa7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 MKRN4PQ13434 485 aaPredicted RBP7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 GPNMBQ14956 572 aa7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 QRICH1Q2TAL8 776 aa7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 FAM47CQ5HY64 1035 aa7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 MYSM1Q5VVJ2 828 aa7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 FAM43BQ6ZT52 329 aaPredicted RBP7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 FBXO11Q86XK2 927 aa7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 ENAHQ8N8S7 591 aaPredicted RBP7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 TAAR1Q96RJ0 339 aa7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 UHRF1Q96T88 793 aaPredicted RBP7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 MTA3Q9BTC8 594 aa7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 PXMP2Q9NR77 195 aa7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 COL20A1Q9P218 1284 aa7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 NOD1Q9Y239 953 aa7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 DDX49Q9Y6V7 483 aaKnown RBP7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 XIRP2A4UGR9 3374 aa7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 PRRC2BQ5JSZ5 2229 aaKnown RBP7.12□□□□□ -1.27
LSM3P4-201ENST00000502948 REV3LO60673 3130 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 FRMPD4Q14CM0 1322 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 PALM3A6NDB9 673 aaPredicted RBP7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 ZBTB5O15062 677 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 LPXNO60711 386 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 GJB5O95377 273 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 CKBP12277 381 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 SMARCA1P28370 1054 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 ICAM3P32942 547 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 KCNJ6P48051 423 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 RABGGTBP53611 331 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 ERVK-21P61565 698 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 WDR5P61964 334 aaKnown RBP7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 SEC23AQ15436 765 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 TRIM71Q2Q1W2 868 aaKnown RBP7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 USH1GQ495M9 461 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 ARHGEF16Q5VV41 709 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 GDF6Q6KF10 455 aaPredicted RBP7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 LRRC8DQ7L1W4 858 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 DEFB128Q7Z7B8 93 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 VSIG10LQ86VR7 867 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 TEX2Q8IWB9 1127 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 C7orf31Q8N865 590 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 IL27Q8NEV9 243 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 AFG1LQ8WV93 481 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 COPS5Q92905 334 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 RILPL2Q969X0 211 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 CRBNQ96SW2 442 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 MAP3K14Q99558 947 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 RAD9AQ99638 391 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 PDCD2LQ9BRP1 358 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 LNPKQ9C0E8 428 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 RIOX1Q9H6W3 641 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 MTMR7Q9Y216 660 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 KAT6AQ92794 2004 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 TCF20Q9UGU0 1960 aaKnown RBP7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 NLRC5Q86WI3 1866 aa7.11□□□□□ -1.27
LSM3P4-201ENST00000502948 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 B4E1Z4 1266 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 OPLAHO14841 1288 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 TLL1O43897 1013 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 NBNO60934 754 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 RGS20O76081 388 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 GOLGA8HP0CJ92 632 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 MYOGP15173 224 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 COL9A1P20849 921 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 PSEN2P49810 448 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 HTRA4P83105 476 aaPredicted RBP7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 IKBKEQ14164 716 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 MFSD10Q14728 455 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 PGM5Q15124 567 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 LY6KQ17RY6 165 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 KIAA0753Q2KHM9 967 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms