RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 LAPTM5Q13571 262 aa7.05□□□□□ -1.28
HMGB1P3-201ENST00000502802 ARHGAP44Q17R89 818 aa7.05□□□□□ -1.28
HMGB1P3-201ENST00000502802 TMPRSS7Q7RTY8 843 aa7.05□□□□□ -1.28
HMGB1P3-201ENST00000502802 CD163Q86VB7 1156 aa7.05□□□□□ -1.28
HMGB1P3-201ENST00000502802 MYO1HQ8N1T3 1032 aa7.05□□□□□ -1.28
HMGB1P3-201ENST00000502802 NAT16Q8N8M0 369 aa7.05□□□□□ -1.28
HMGB1P3-201ENST00000502802 C2orf69Q8N8R5 385 aa7.05□□□□□ -1.28
HMGB1P3-201ENST00000502802 HOOK2Q96ED9 719 aa7.05□□□□□ -1.28
HMGB1P3-201ENST00000502802 SEMA3GQ9NS98 782 aa7.05□□□□□ -1.28
HMGB1P3-201ENST00000502802 CATSPERZQ9NTU4 200 aa7.05□□□□□ -1.28
HMGB1P3-201ENST00000502802 PPARGC1AQ9UBK2 798 aaKnown RBP7.05□□□□□ -1.28
HMGB1P3-201ENST00000502802 PLAGL2Q9UPG8 496 aa7.05□□□□□ -1.28
HMGB1P3-201ENST00000502802 TNKSO95271 1327 aa7.04□□□□□ -1.28
HMGB1P3-201ENST00000502802 C7orf72A4D263 438 aa7.04□□□□□ -1.28
HMGB1P3-201ENST00000502802 C1QTNF9BB2RNN3 333 aa7.04□□□□□ -1.28
HMGB1P3-201ENST00000502802 K7ESF4 209 aa7.04□□□□□ -1.28
HMGB1P3-201ENST00000502802 RPL11P62913 178 aaKnown RBP7.04□□□□□ -1.28
HMGB1P3-201ENST00000502802 LACTBP83111 547 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P3-201ENST00000502802 NFIAQ12857 509 aa7.04□□□□□ -1.28
HMGB1P3-201ENST00000502802 CRY1Q16526 586 aa7.04□□□□□ -1.28
HMGB1P3-201ENST00000502802 CISD2Q8N5K1 135 aaKnown RBP7.04□□□□□ -1.28
HMGB1P3-201ENST00000502802 CAMKK2Q96RR4 588 aa7.04□□□□□ -1.28
HMGB1P3-201ENST00000502802 DBNDD2Q9BQY9 259 aa7.04□□□□□ -1.28
HMGB1P3-201ENST00000502802 OSBPL1AQ9BXW6 950 aa7.04□□□□□ -1.28
HMGB1P3-201ENST00000502802 CDH19Q9H159 772 aa7.04□□□□□ -1.28
HMGB1P3-201ENST00000502802 ATG3Q9NT62 314 aa7.04□□□□□ -1.28
HMGB1P3-201ENST00000502802 CBLCQ9ULV8 474 aa7.04□□□□□ -1.28
HMGB1P3-201ENST00000502802 PCDHA11Q9Y5I1 949 aa7.04□□□□□ -1.28
HMGB1P3-201ENST00000502802 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P3-201ENST00000502802 TMEM82A0PJX8 343 aa7.03□□□□□ -1.28
HMGB1P3-201ENST00000502802 NPHS1O60500 1241 aa7.03□□□□□ -1.28
HMGB1P3-201ENST00000502802 BCL6P41182 706 aa7.03□□□□□ -1.28
HMGB1P3-201ENST00000502802 OTOP1Q7RTM1 612 aa7.03□□□□□ -1.28
HMGB1P3-201ENST00000502802 CREG2Q8IUH2 290 aa7.03□□□□□ -1.28
HMGB1P3-201ENST00000502802 SCYL1Q96KG9 808 aa7.03□□□□□ -1.28
HMGB1P3-201ENST00000502802 CDIP1Q9H305 208 aa7.03□□□□□ -1.28
HMGB1P3-201ENST00000502802 LRRC4CQ9HCJ2 640 aa7.03□□□□□ -1.28
HMGB1P3-201ENST00000502802 CLDND1Q9NY35 253 aa7.03□□□□□ -1.28
HMGB1P3-201ENST00000502802 FBXL7Q9UJT9 491 aa7.03□□□□□ -1.28
HMGB1P3-201ENST00000502802 SNX11Q9Y5W9 270 aa7.03□□□□□ -1.28
HMGB1P3-201ENST00000502802 H7BY64 318 aa7.02□□□□□ -1.29
HMGB1P3-201ENST00000502802 GATA4P43694 442 aa7.02□□□□□ -1.29
HMGB1P3-201ENST00000502802 SESN3P58005 492 aa7.02□□□□□ -1.29
HMGB1P3-201ENST00000502802 INSM1Q01101 510 aaPredicted RBP7.02□□□□□ -1.29
HMGB1P3-201ENST00000502802 TEKQ02763 1124 aa7.02□□□□□ -1.29
HMGB1P3-201ENST00000502802 CPSF6Q16630 551 aaKnown RBP eCLIP7.02□□□□□ -1.29
HMGB1P3-201ENST00000502802 IFI16Q16666 785 aaKnown RBP7.02□□□□□ -1.29
HMGB1P3-201ENST00000502802 RGL3Q3MIN7 710 aa7.02□□□□□ -1.29
HMGB1P3-201ENST00000502802 HLA-DQA1Q5Y7H0 255 aa7.02□□□□□ -1.29
HMGB1P3-201ENST00000502802 ZPBP2Q6X784 338 aa7.02□□□□□ -1.29
HMGB1P3-201ENST00000502802 HDGFL2Q7Z4V5 671 aaPredicted RBP7.02□□□□□ -1.29
HMGB1P3-201ENST00000502802 WAPLQ7Z5K2 1190 aa7.02□□□□□ -1.29
HMGB1P3-201ENST00000502802 TMEM52Q8NDY8 209 aa7.02□□□□□ -1.29
HMGB1P3-201ENST00000502802 AHCYL2Q96HN2 611 aaKnown RBP7.02□□□□□ -1.29
HMGB1P3-201ENST00000502802 KCNJ15Q99712 375 aa7.02□□□□□ -1.29
HMGB1P3-201ENST00000502802 RTFDC1Q9BY42 306 aaPredicted RBP7.02□□□□□ -1.29
HMGB1P3-201ENST00000502802 OXSMQ9NWU1 459 aa7.02□□□□□ -1.29
HMGB1P3-201ENST00000502802 ERVK13-1Q9NX77 482 aa7.02□□□□□ -1.29
HMGB1P3-201ENST00000502802 ADGRE2Q9UHX3 823 aa7.02□□□□□ -1.29
HMGB1P3-201ENST00000502802 ZNF180Q9UJW8 692 aa7.02□□□□□ -1.29
HMGB1P3-201ENST00000502802 TMEM265A0A087WTH1 108 aa7.01□□□□□ -1.29
HMGB1P3-201ENST00000502802 ESR1P03372 595 aa7.01□□□□□ -1.29
HMGB1P3-201ENST00000502802 YBX3P16989 372 aaKnown RBP eCLIP7.01□□□□□ -1.29
HMGB1P3-201ENST00000502802 ATF3P18847 181 aa7.01□□□□□ -1.29
HMGB1P3-201ENST00000502802 RPL10P27635 214 aaKnown RBP7.01□□□□□ -1.29
HMGB1P3-201ENST00000502802 ERVK-21P61565 698 aa7.01□□□□□ -1.29
HMGB1P3-201ENST00000502802 EGR3Q06889 387 aa7.01□□□□□ -1.29
HMGB1P3-201ENST00000502802 PTPN21Q16825 1174 aa7.01□□□□□ -1.29
HMGB1P3-201ENST00000502802 ABCB5Q2M3G0 1257 aa7.01□□□□□ -1.29
HMGB1P3-201ENST00000502802 CREB3L3Q68CJ9 461 aa7.01□□□□□ -1.29
HMGB1P3-201ENST00000502802 CCSAPQ6IQ19 270 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P3-201ENST00000502802 C14orf80Q86SX3 495 aa7.01□□□□□ -1.29
HMGB1P3-201ENST00000502802 CBARPQ8N350 705 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P3-201ENST00000502802 EFHBQ8N7U6 833 aa7.01□□□□□ -1.29
HMGB1P3-201ENST00000502802 SHKBP1Q8TBC3 707 aa7.01□□□□□ -1.29
HMGB1P3-201ENST00000502802 NETO1Q8TDF5 533 aa7.01□□□□□ -1.29
HMGB1P3-201ENST00000502802 SLC5A5Q92911 643 aa7.01□□□□□ -1.29
HMGB1P3-201ENST00000502802 TMEM169Q96HH4 297 aa7.01□□□□□ -1.29
HMGB1P3-201ENST00000502802 FCRL2Q96LA5 508 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P3-201ENST00000502802 VTA1Q9NP79 307 aa7.01□□□□□ -1.29
HMGB1P3-201ENST00000502802 H2AFY2Q9P0M6 372 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P3-201ENST00000502802 PITPNM2Q9BZ72 1349 aa7.01□□□□□ -1.29
HMGB1P3-201ENST00000502802 ZNF561-AS1K7EIQ3 104 aa7□□□□□ -1.29
HMGB1P3-201ENST00000502802 GSC2O15499 205 aa7□□□□□ -1.29
HMGB1P3-201ENST00000502802 CAND2O75155 1236 aa7□□□□□ -1.29
HMGB1P3-201ENST00000502802 RFPL1O75677 317 aa7□□□□□ -1.29
HMGB1P3-201ENST00000502802 ABLIM3O94929 683 aa7□□□□□ -1.29
HMGB1P3-201ENST00000502802 PDE6AP16499 860 aa7□□□□□ -1.29
HMGB1P3-201ENST00000502802 GNALP38405 381 aa7□□□□□ -1.29
HMGB1P3-201ENST00000502802 RBM10P98175 930 aaKnown RBP7□□□□□ -1.29
HMGB1P3-201ENST00000502802 INAVAQ3KP66 663 aa7□□□□□ -1.29
HMGB1P3-201ENST00000502802 CEP68Q76N32 757 aa7□□□□□ -1.29
HMGB1P3-201ENST00000502802 OSTM1Q86WC4 334 aa7□□□□□ -1.29
HMGB1P3-201ENST00000502802 TCEAL8Q8IYN2 117 aa7□□□□□ -1.29
HMGB1P3-201ENST00000502802 PLD6Q8N2A8 252 aaKnown RBP7□□□□□ -1.29
HMGB1P3-201ENST00000502802 CLRN3Q8NCR9 226 aa7□□□□□ -1.29
HMGB1P3-201ENST00000502802 DPF3Q92784 378 aa7□□□□□ -1.29
HMGB1P3-201ENST00000502802 FUBP3Q96I24 572 aaKnown RBP eCLIP7□□□□□ -1.29
HMGB1P3-201ENST00000502802 BOCQ9BWV1 1114 aa7□□□□□ -1.29
HMGB1P3-201ENST00000502802 JAM3Q9BX67 310 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms