RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 SCFD2Q8WU76 684 aa17.82■□□□□ 0.44
CPNE1-228ENST00000498814 TMEM260Q9NX78 707 aa17.82■□□□□ 0.44
CPNE1-228ENST00000498814 PCDHA4Q9UN74 947 aa17.82■□□□□ 0.44
CPNE1-228ENST00000498814 ADAMTS3O15072 1205 aa17.81■□□□□ 0.44
CPNE1-228ENST00000498814 ADCY6O43306 1168 aa17.81■□□□□ 0.44
CPNE1-228ENST00000498814 MRPS9P82933 396 aaKnown RBP17.81■□□□□ 0.44
CPNE1-228ENST00000498814 HMGN5P82970 282 aaKnown RBP17.81■□□□□ 0.44
CPNE1-228ENST00000498814 JAKMIP3Q5VZ66 844 aa17.81■□□□□ 0.44
CPNE1-228ENST00000498814 ANKLE1Q8NAG6 615 aa17.81■□□□□ 0.44
CPNE1-228ENST00000498814 PHF20Q9BVI0 1012 aa17.81■□□□□ 0.44
CPNE1-228ENST00000498814 ANO3Q9BYT9 981 aa17.81■□□□□ 0.44
CPNE1-228ENST00000498814 WDR11Q9BZH6 1224 aa17.81■□□□□ 0.44
CPNE1-228ENST00000498814 XPNPEP3Q9NQH7 507 aa17.81■□□□□ 0.44
CPNE1-228ENST00000498814 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.8■□□□□ 0.44
CPNE1-228ENST00000498814 CAPN15O75808 1086 aa17.8■□□□□ 0.44
CPNE1-228ENST00000498814 RGS20O76081 388 aa17.8■□□□□ 0.44
CPNE1-228ENST00000498814 SMPD1P17405 629 aa17.8■□□□□ 0.44
CPNE1-228ENST00000498814 TTLL4Q14679 1199 aa17.8■□□□□ 0.44
CPNE1-228ENST00000498814 NPY5RQ15761 445 aa17.8■□□□□ 0.44
CPNE1-228ENST00000498814 DUSP28Q4G0W2 176 aa17.8■□□□□ 0.44
CPNE1-228ENST00000498814 SEPT14Q6ZU15 432 aa17.8■□□□□ 0.44
CPNE1-228ENST00000498814 BLIDQ8IZY5 108 aa17.8■□□□□ 0.44
CPNE1-228ENST00000498814 ARRDC4Q8NCT1 418 aa17.8■□□□□ 0.44
CPNE1-228ENST00000498814 LENG1Q96BZ8 264 aaPredicted RBP17.8■□□□□ 0.44
CPNE1-228ENST00000498814 GNEQ9Y223 722 aaKnown RBP17.8■□□□□ 0.44
CPNE1-228ENST00000498814 Q9Y3F1 56 aa17.8■□□□□ 0.44
CPNE1-228ENST00000498814 NKRFO15226 690 aaKnown RBP eCLIP17.79■□□□□ 0.44
CPNE1-228ENST00000498814 SREBF1P36956 1147 aa17.79■□□□□ 0.44
CPNE1-228ENST00000498814 NKX3-2P78367 333 aa17.79■□□□□ 0.44
CPNE1-228ENST00000498814 GNPTABQ3T906 1256 aa17.79■□□□□ 0.44
CPNE1-228ENST00000498814 CCDC62Q6P9F0 684 aa17.79■□□□□ 0.44
CPNE1-228ENST00000498814 KCNV1Q6PIU1 500 aa17.79■□□□□ 0.44
CPNE1-228ENST00000498814 PGBD1Q96JS3 809 aa17.79■□□□□ 0.44
CPNE1-228ENST00000498814 INPP4AQ96PE3 977 aaPredicted RBP17.79■□□□□ 0.44
CPNE1-228ENST00000498814 UPF3AQ9H1J1 476 aaKnown RBP17.79■□□□□ 0.44
CPNE1-228ENST00000498814 GJB4Q9NTQ9 266 aa17.79■□□□□ 0.44
CPNE1-228ENST00000498814 KCNJ14Q9UNX9 436 aa17.79■□□□□ 0.44
CPNE1-228ENST00000498814 SYNRGQ9UMZ2 1314 aa17.78■□□□□ 0.44
CPNE1-228ENST00000498814 M0R2N6 131 aa17.78■□□□□ 0.44
CPNE1-228ENST00000498814 ADAMTS4O75173 837 aa17.78■□□□□ 0.44
CPNE1-228ENST00000498814 TXNP10599 105 aaKnown RBP17.78■□□□□ 0.44
CPNE1-228ENST00000498814 TGFB3P10600 412 aa17.78■□□□□ 0.44
CPNE1-228ENST00000498814 RGS19P49795 217 aa17.78■□□□□ 0.44
CPNE1-228ENST00000498814 MNX1P50219 401 aaPredicted RBP17.78■□□□□ 0.44
CPNE1-228ENST00000498814 GJA9P57773 515 aa17.78■□□□□ 0.44
CPNE1-228ENST00000498814 TMEM63BQ5T3F8 832 aa17.78■□□□□ 0.44
CPNE1-228ENST00000498814 RASGRP4Q8TDF6 673 aa17.78■□□□□ 0.44
CPNE1-228ENST00000498814 CRYGNQ8WXF5 182 aa17.78■□□□□ 0.44
CPNE1-228ENST00000498814 SNX21Q969T3 373 aa17.78■□□□□ 0.44
CPNE1-228ENST00000498814 ZFP91Q96JP5 570 aaPredicted RBP17.78■□□□□ 0.44
CPNE1-228ENST00000498814 DNM1LO00429 736 aa17.77■□□□□ 0.44
CPNE1-228ENST00000498814 ARIH2O95376 493 aa17.77■□□□□ 0.44
CPNE1-228ENST00000498814 PGK1P00558 417 aa17.77■□□□□ 0.44
CPNE1-228ENST00000498814 ICAM3P32942 547 aa17.77■□□□□ 0.44
CPNE1-228ENST00000498814 CUL4AQ13619 759 aa17.77■□□□□ 0.44
CPNE1-228ENST00000498814 TRIM29Q14134 588 aa17.77■□□□□ 0.44
CPNE1-228ENST00000498814 LRRC41Q15345 812 aa17.77■□□□□ 0.44
CPNE1-228ENST00000498814 UBE2Q1Q7Z7E8 422 aa17.77■□□□□ 0.44
CPNE1-228ENST00000498814 RNF180Q86T96 592 aa17.77■□□□□ 0.44
CPNE1-228ENST00000498814 TLK2Q86UE8 772 aa17.77■□□□□ 0.44
CPNE1-228ENST00000498814 FAM184AQ8NB25 1140 aa17.77■□□□□ 0.44
CPNE1-228ENST00000498814 SPC25Q9HBM1 224 aa17.77■□□□□ 0.44
CPNE1-228ENST00000498814 RTEL1Q9NZ71 1219 aa17.77■□□□□ 0.44
CPNE1-228ENST00000498814 DDX41Q9UJV9 622 aaKnown RBP17.77■□□□□ 0.44
CPNE1-228ENST00000498814 UBIAD1Q9Y5Z9 338 aa17.77■□□□□ 0.44
CPNE1-228ENST00000498814 MRVI1Q9Y6F6 885 aa17.77■□□□□ 0.44
CPNE1-228ENST00000498814 SPATA31C2B4DYI2 1134 aa17.76■□□□□ 0.43
CPNE1-228ENST00000498814 FIBPO43427 364 aa17.76■□□□□ 0.43
CPNE1-228ENST00000498814 FARP2O94887 1054 aaPredicted RBP17.76■□□□□ 0.43
CPNE1-228ENST00000498814 CYP3A4P08684 503 aa17.76■□□□□ 0.43
CPNE1-228ENST00000498814 CST5P28325 142 aaPredicted RBP17.76■□□□□ 0.43
CPNE1-228ENST00000498814 ARHGAP4P98171 946 aa17.76■□□□□ 0.43
CPNE1-228ENST00000498814 GJC2Q5T442 439 aaPredicted RBP17.76■□□□□ 0.43
CPNE1-228ENST00000498814 IFFO2Q5TF58 517 aa17.76■□□□□ 0.43
CPNE1-228ENST00000498814 KRT40Q6A162 431 aa17.76■□□□□ 0.43
CPNE1-228ENST00000498814 NLRX1Q86UT6 975 aa17.76■□□□□ 0.43
CPNE1-228ENST00000498814 KLHDC9Q8NEP7 349 aa17.76■□□□□ 0.43
CPNE1-228ENST00000498814 GPRASP2Q96D09 838 aa17.76■□□□□ 0.43
CPNE1-228ENST00000498814 AP5M1Q9H0R1 490 aa17.76■□□□□ 0.43
CPNE1-228ENST00000498814 KIF3AQ9Y496 699 aa17.76■□□□□ 0.43
CPNE1-228ENST00000498814 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.76■□□□□ 0.43
CPNE1-228ENST00000498814 CTAGE5O15320 804 aa17.75■□□□□ 0.43
CPNE1-228ENST00000498814 MAFGO15525 162 aa17.75■□□□□ 0.43
CPNE1-228ENST00000498814 DYNC1LI2O43237 492 aaPredicted RBP17.75■□□□□ 0.43
CPNE1-228ENST00000498814 MMP1P03956 469 aa17.75■□□□□ 0.43
CPNE1-228ENST00000498814 C6orf222P0C671 652 aaPredicted RBP17.75■□□□□ 0.43
CPNE1-228ENST00000498814 ITGB5P18084 799 aa17.75■□□□□ 0.43
CPNE1-228ENST00000498814 LY6KQ17RY6 165 aa17.75■□□□□ 0.43
CPNE1-228ENST00000498814 KRT25Q7Z3Z0 450 aa17.75■□□□□ 0.43
CPNE1-228ENST00000498814 C8orf76Q96K31 380 aa17.75■□□□□ 0.43
CPNE1-228ENST00000498814 MXRA8Q9BRK3 442 aa17.75■□□□□ 0.43
CPNE1-228ENST00000498814 TSEN34Q9BSV6 310 aaKnown RBP17.75■□□□□ 0.43
CPNE1-228ENST00000498814 BRMS1Q9HCU9 246 aa17.75■□□□□ 0.43
CPNE1-228ENST00000498814 JADE2Q9NQC1 790 aa17.75■□□□□ 0.43
CPNE1-228ENST00000498814 DOCK5Q9H7D0 1870 aa17.75■□□□□ 0.43
CPNE1-228ENST00000498814 KBTBD13C9JR72 458 aa17.74■□□□□ 0.43
CPNE1-228ENST00000498814 K7ELQ4 463 aaPredicted RBP17.74■□□□□ 0.43
CPNE1-228ENST00000498814 GH1P01241 217 aa17.74■□□□□ 0.43
CPNE1-228ENST00000498814 MYCNP04198 464 aaPredicted RBP17.74■□□□□ 0.43
CPNE1-228ENST00000498814 COL6A1P12109 1028 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms