RNA–Protein interactions for RNA: ENST00000497845.1

POLR2B-211, Transcript of RNA polymerase II subunit B, humanhuman

TSL 4

Gene POLR2B, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-211ENST00000497845 CSPG5O95196 566 aa7.2□□□□□ -1.26
POLR2B-211ENST00000497845 USP14P54578 494 aa7.2□□□□□ -1.26
POLR2B-211ENST00000497845 RHBDL3P58872 404 aa7.2□□□□□ -1.26
POLR2B-211ENST00000497845 MTMR3Q13615 1198 aa7.2□□□□□ -1.26
POLR2B-211ENST00000497845 ACVR2BQ13705 512 aa7.2□□□□□ -1.26
POLR2B-211ENST00000497845 CCDC144BQ3MJ40 725 aa7.2□□□□□ -1.26
POLR2B-211ENST00000497845 METTL24Q5JXM2 366 aa7.2□□□□□ -1.26
POLR2B-211ENST00000497845 UBALD2Q8IYN6 164 aa7.2□□□□□ -1.26
POLR2B-211ENST00000497845 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.2□□□□□ -1.26
POLR2B-211ENST00000497845 RIN2Q8WYP3 895 aaPredicted RBP7.2□□□□□ -1.26
POLR2B-211ENST00000497845 SAMD11Q96NU1 681 aa7.2□□□□□ -1.26
POLR2B-211ENST00000497845 HNRNPABQ99729 332 aaKnown RBP7.2□□□□□ -1.26
POLR2B-211ENST00000497845 DNAJC18Q9H819 358 aa7.2□□□□□ -1.26
POLR2B-211ENST00000497845 GINM1Q9NU53 330 aa7.2□□□□□ -1.26
POLR2B-211ENST00000497845 HOXC10Q9NYD6 342 aa7.2□□□□□ -1.26
POLR2B-211ENST00000497845 CLEC1BQ9P126 229 aa7.2□□□□□ -1.26
POLR2B-211ENST00000497845 NCDNQ9UBB6 729 aa7.2□□□□□ -1.26
POLR2B-211ENST00000497845 INSL6Q9Y581 213 aa7.2□□□□□ -1.26
POLR2B-211ENST00000497845 CNTNAP5Q8WYK1 1306 aa7.2□□□□□ -1.26
POLR2B-211ENST00000497845 SCN5AQ14524 2016 aa7.2□□□□□ -1.26
POLR2B-211ENST00000497845 ITPR1Q14643 2758 aa7.2□□□□□ -1.26
POLR2B-211ENST00000497845 CDK5RAP2Q96SN8 1893 aa7.19□□□□□ -1.26
POLR2B-211ENST00000497845 PTPRSQ13332 1948 aa7.19□□□□□ -1.26
POLR2B-211ENST00000497845 C1QTNF9BB2RNN3 333 aa7.19□□□□□ -1.26
POLR2B-211ENST00000497845 C1QTNF9P0C862 333 aa7.19□□□□□ -1.26
POLR2B-211ENST00000497845 AOC1P19801 751 aa7.19□□□□□ -1.26
POLR2B-211ENST00000497845 SP100P23497 879 aaPredicted RBP7.19□□□□□ -1.26
POLR2B-211ENST00000497845 PMLP29590 882 aa7.19□□□□□ -1.26
POLR2B-211ENST00000497845 SHC2P98077 582 aa7.19□□□□□ -1.26
POLR2B-211ENST00000497845 COASYQ13057 564 aa7.19□□□□□ -1.26
POLR2B-211ENST00000497845 COG2Q14746 738 aa7.19□□□□□ -1.26
POLR2B-211ENST00000497845 TCTN1Q2MV58 587 aa7.19□□□□□ -1.26
POLR2B-211ENST00000497845 SOWAHCQ53LP3 525 aaPredicted RBP7.19□□□□□ -1.26
POLR2B-211ENST00000497845 ZC3H14Q6PJT7 736 aaKnown RBP7.19□□□□□ -1.26
POLR2B-211ENST00000497845 LYPD4Q6UWN0 246 aa7.19□□□□□ -1.26
POLR2B-211ENST00000497845 DZIP1Q86YF9 867 aaKnown RBP7.19□□□□□ -1.26
POLR2B-211ENST00000497845 TMEM192Q8IY95 271 aa7.19□□□□□ -1.26
POLR2B-211ENST00000497845 SUMF1Q8NBK3 374 aa7.19□□□□□ -1.26
POLR2B-211ENST00000497845 ACER1Q8TDN7 264 aa7.19□□□□□ -1.26
POLR2B-211ENST00000497845 KIAA1683Q9H0B3 1180 aa7.19□□□□□ -1.26
POLR2B-211ENST00000497845 PNNQ9H307 717 aaKnown RBP7.19□□□□□ -1.26
POLR2B-211ENST00000497845 PI4KBQ9UBF8 816 aa7.19□□□□□ -1.26
POLR2B-211ENST00000497845 ASTN1O14525 1302 aa7.19□□□□□ -1.26
POLR2B-211ENST00000497845 RBAK-RBAKDNI3L0D1 243 aa7.18□□□□□ -1.26
POLR2B-211ENST00000497845 PDE8BO95263 885 aa7.18□□□□□ -1.26
POLR2B-211ENST00000497845 GH2P01242 217 aa7.18□□□□□ -1.26
POLR2B-211ENST00000497845 IFIT1P09914 478 aaKnown RBP7.18□□□□□ -1.26
POLR2B-211ENST00000497845 TIMP2P16035 220 aa7.18□□□□□ -1.26
POLR2B-211ENST00000497845 TMPOP42166 694 aaKnown RBP7.18□□□□□ -1.26
POLR2B-211ENST00000497845 NKX3-2P78367 333 aa7.18□□□□□ -1.26
POLR2B-211ENST00000497845 NEUROD2Q15784 382 aa7.18□□□□□ -1.26
POLR2B-211ENST00000497845 FSCN1Q16658 493 aaKnown RBP7.18□□□□□ -1.26
POLR2B-211ENST00000497845 LRRC24Q50LG9 513 aa7.18□□□□□ -1.26
POLR2B-211ENST00000497845 NOL8Q76FK4 1167 aaKnown RBP7.18□□□□□ -1.26
POLR2B-211ENST00000497845 FBXO11Q86XK2 927 aa7.18□□□□□ -1.26
POLR2B-211ENST00000497845 MSL3Q8N5Y2 521 aaKnown RBP7.18□□□□□ -1.26
POLR2B-211ENST00000497845 VGLL2Q8N8G2 317 aa7.18□□□□□ -1.26
POLR2B-211ENST00000497845 TRIM34Q9BYJ4 488 aa7.18□□□□□ -1.26
POLR2B-211ENST00000497845 TANGO6Q9C0B7 1094 aa7.18□□□□□ -1.26
POLR2B-211ENST00000497845 USP18Q9UMW8 372 aa7.18□□□□□ -1.26
POLR2B-211ENST00000497845 SORCS3Q9UPU3 1222 aa7.18□□□□□ -1.26
POLR2B-211ENST00000497845 MROH7-TTC4A0A0A0MT08 1334 aa7.18□□□□□ -1.26
POLR2B-211ENST00000497845 SALL1Q9NSC2 1324 aa7.18□□□□□ -1.26
POLR2B-211ENST00000497845 GPR75-ASB3A0A0A6YYF3 556 aa7.17□□□□□ -1.26
POLR2B-211ENST00000497845 SRRM3A6NNA2 597 aaPredicted RBP7.17□□□□□ -1.26
POLR2B-211ENST00000497845 GRM6O15303 877 aa7.17□□□□□ -1.26
POLR2B-211ENST00000497845 ZEB2O60315 1214 aa7.17□□□□□ -1.26
POLR2B-211ENST00000497845 SLC25A27O95847 323 aa7.17□□□□□ -1.26
POLR2B-211ENST00000497845 PTGS1P23219 599 aa7.17□□□□□ -1.26
POLR2B-211ENST00000497845 GPNMBQ14956 572 aa7.17□□□□□ -1.26
POLR2B-211ENST00000497845 C6orf118Q5T5N4 469 aa7.17□□□□□ -1.26
POLR2B-211ENST00000497845 CCDC30Q5VVM6 783 aa7.17□□□□□ -1.26
POLR2B-211ENST00000497845 CNKSR3Q6P9H4 555 aa7.17□□□□□ -1.26
POLR2B-211ENST00000497845 MAMDC4Q6UXC1 1216 aa7.17□□□□□ -1.26
POLR2B-211ENST00000497845 UNQ6494/PRO21346Q6UXR6 183 aa7.17□□□□□ -1.26
POLR2B-211ENST00000497845 ZGPATQ8N5A5 531 aaKnown RBP7.17□□□□□ -1.26
POLR2B-211ENST00000497845 MB21D1Q8N884 522 aa7.17□□□□□ -1.26
POLR2B-211ENST00000497845 KDF1Q8NAX2 398 aaPredicted RBP7.17□□□□□ -1.26
POLR2B-211ENST00000497845 NANOS1Q8WY41 292 aaKnown RBP7.17□□□□□ -1.26
POLR2B-211ENST00000497845 BARX2Q9UMQ3 279 aaPredicted RBP7.17□□□□□ -1.26
POLR2B-211ENST00000497845 COL11A1P12107 1806 aaPredicted RBP7.17□□□□□ -1.26
POLR2B-211ENST00000497845 RALGAPA2Q2PPJ7 1873 aa7.16□□□□□ -1.26
POLR2B-211ENST00000497845 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.16□□□□□ -1.26
POLR2B-211ENST00000497845 ABHD14A-ACY1A0A1B0GW23 586 aa7.16□□□□□ -1.26
POLR2B-211ENST00000497845 DXOO77932 396 aaKnown RBP7.16□□□□□ -1.26
POLR2B-211ENST00000497845 NPR3P17342 541 aa7.16□□□□□ -1.26
POLR2B-211ENST00000497845 ATF7P17544 494 aaPredicted RBP7.16□□□□□ -1.26
POLR2B-211ENST00000497845 FGFR2P21802 821 aa7.16□□□□□ -1.26
POLR2B-211ENST00000497845 WDR4P57081 412 aaKnown RBP7.16□□□□□ -1.26
POLR2B-211ENST00000497845 HTRA4P83105 476 aaPredicted RBP7.16□□□□□ -1.26
POLR2B-211ENST00000497845 BFSP2Q13515 415 aa7.16□□□□□ -1.26
POLR2B-211ENST00000497845 TMEM132BQ14DG7 1078 aa7.16□□□□□ -1.26
POLR2B-211ENST00000497845 RAB3GAP1Q15042 981 aa7.16□□□□□ -1.26
POLR2B-211ENST00000497845 PUM3Q15397 648 aaKnown RBP7.16□□□□□ -1.26
POLR2B-211ENST00000497845 N4BP2L1Q5TBK1 243 aaPredicted RBP7.16□□□□□ -1.26
POLR2B-211ENST00000497845 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.16□□□□□ -1.26
POLR2B-211ENST00000497845 TLK2Q86UE8 772 aa7.16□□□□□ -1.26
POLR2B-211ENST00000497845 LINS1Q8NG48 757 aa7.16□□□□□ -1.26
POLR2B-211ENST00000497845 PPP1R13LQ8WUF5 828 aa7.16□□□□□ -1.26
POLR2B-211ENST00000497845 ATG4CQ96DT6 458 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms