RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 EDIL3O43854 480 aa16.11■□□□□ 0.17
VPS26A-209ENST00000497564 ALAS1P13196 640 aa16.11■□□□□ 0.17
VPS26A-209ENST00000497564 GCFC2P16383 781 aaKnown RBP16.11■□□□□ 0.17
VPS26A-209ENST00000497564 MARCKSP29966 332 aaPredicted RBP16.11■□□□□ 0.17
VPS26A-209ENST00000497564 SREBF1P36956 1147 aa16.11■□□□□ 0.17
VPS26A-209ENST00000497564 PTGDRQ13258 359 aa16.11■□□□□ 0.17
VPS26A-209ENST00000497564 IRF5Q13568 498 aa16.11■□□□□ 0.17
VPS26A-209ENST00000497564 PPP4R3AQ6IN85 833 aa16.11■□□□□ 0.17
VPS26A-209ENST00000497564 ZNF579Q8NAF0 562 aaKnown RBP16.11■□□□□ 0.17
VPS26A-209ENST00000497564 GTF3C2Q8WUA4 911 aaPredicted RBP16.11■□□□□ 0.17
VPS26A-209ENST00000497564 PLXNA1Q9UIW2 1896 aa16.11■□□□□ 0.17
VPS26A-209ENST00000497564 WDR81Q562E7 1941 aa16.1■□□□□ 0.17
VPS26A-209ENST00000497564 CYP3A7-CYP3A51PA0A087WV96 503 aa16.1■□□□□ 0.17
VPS26A-209ENST00000497564 FAM237AA0A1B0GTK4 181 aa16.1■□□□□ 0.17
VPS26A-209ENST00000497564 CFBP00751 764 aa16.1■□□□□ 0.17
VPS26A-209ENST00000497564 INHAP05111 366 aa16.1■□□□□ 0.17
VPS26A-209ENST00000497564 CMA1P23946 247 aa16.1■□□□□ 0.17
VPS26A-209ENST00000497564 CYP3A7P24462 503 aa16.1■□□□□ 0.17
VPS26A-209ENST00000497564 MCM7P33993 719 aa16.1■□□□□ 0.17
VPS26A-209ENST00000497564 PRPHP41219 470 aa16.1■□□□□ 0.17
VPS26A-209ENST00000497564 TRIM32Q13049 653 aa16.1■□□□□ 0.17
VPS26A-209ENST00000497564 LETM2Q2VYF4 491 aa16.1■□□□□ 0.17
VPS26A-209ENST00000497564 SNRNP48Q6IEG0 339 aaKnown RBP16.1■□□□□ 0.17
VPS26A-209ENST00000497564 GPR142Q7Z601 462 aa16.1■□□□□ 0.17
VPS26A-209ENST00000497564 SLAIN1Q8ND83 568 aa16.1■□□□□ 0.17
VPS26A-209ENST00000497564 MRPS27Q92552 414 aaKnown RBP16.1■□□□□ 0.17
VPS26A-209ENST00000497564 MBOAT7Q96N66 472 aa16.1■□□□□ 0.17
VPS26A-209ENST00000497564 TRERF1Q96PN7 1200 aa16.1■□□□□ 0.17
VPS26A-209ENST00000497564 ANP32EQ9BTT0 268 aa16.1■□□□□ 0.17
VPS26A-209ENST00000497564 UNC93B1Q9H1C4 597 aa16.1■□□□□ 0.17
VPS26A-209ENST00000497564 EHMT1Q9H9B1 1298 aa16.1■□□□□ 0.17
VPS26A-209ENST00000497564 RNF146Q9NTX7 359 aa16.1■□□□□ 0.17
VPS26A-209ENST00000497564 LRRC37A2A6NM11 1700 aa16.09■□□□□ 0.17
VPS26A-209ENST00000497564 NFIBO00712 420 aa16.09■□□□□ 0.17
VPS26A-209ENST00000497564 CCNT1O60563 726 aaKnown RBP16.09■□□□□ 0.17
VPS26A-209ENST00000497564 CYP3A4P08684 503 aa16.09■□□□□ 0.17
VPS26A-209ENST00000497564 CCL5P13501 91 aa16.09■□□□□ 0.17
VPS26A-209ENST00000497564 CYP2B6P20813 491 aa16.09■□□□□ 0.17
VPS26A-209ENST00000497564 HOXA13P31271 388 aaPredicted RBP16.09■□□□□ 0.17
VPS26A-209ENST00000497564 STAT3P40763 770 aa16.09■□□□□ 0.17
VPS26A-209ENST00000497564 MUM1L1Q5H9M0 696 aa16.09■□□□□ 0.17
VPS26A-209ENST00000497564 RESP18Q5W5W9 173 aa16.09■□□□□ 0.17
VPS26A-209ENST00000497564 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.09■□□□□ 0.17
VPS26A-209ENST00000497564 RIOX2Q8IUF8 465 aa16.09■□□□□ 0.17
VPS26A-209ENST00000497564 CCAR1Q8IX12 1150 aaKnown RBP16.09■□□□□ 0.17
VPS26A-209ENST00000497564 CHST13Q8NET6 341 aa16.09■□□□□ 0.17
VPS26A-209ENST00000497564 TBC1D5Q92609 795 aa16.09■□□□□ 0.17
VPS26A-209ENST00000497564 USP6NLQ92738 828 aa16.09■□□□□ 0.17
VPS26A-209ENST00000497564 TMEM106CQ9BVX2 250 aa16.09■□□□□ 0.17
VPS26A-209ENST00000497564 FRMPD4Q14CM0 1322 aa16.09■□□□□ 0.17
VPS26A-209ENST00000497564 RPTORQ8N122 1335 aa16.09■□□□□ 0.17
VPS26A-209ENST00000497564 NEMFO60524 1076 aa16.08■□□□□ 0.16
VPS26A-209ENST00000497564 LIG1P18858 919 aa16.08■□□□□ 0.16
VPS26A-209ENST00000497564 MAPK4P31152 587 aa16.08■□□□□ 0.16
VPS26A-209ENST00000497564 CIITAP33076 1130 aa16.08■□□□□ 0.16
VPS26A-209ENST00000497564 COPB2P35606 906 aa16.08■□□□□ 0.16
VPS26A-209ENST00000497564 ARHGAP4P98171 946 aa16.08■□□□□ 0.16
VPS26A-209ENST00000497564 MORN1Q5T089 497 aa16.08■□□□□ 0.16
VPS26A-209ENST00000497564 WDR78Q5VTH9 848 aa16.08■□□□□ 0.16
VPS26A-209ENST00000497564 PLEKHH3Q7Z736 793 aa16.08■□□□□ 0.16
VPS26A-209ENST00000497564 FSIP1Q8NA03 581 aa16.08■□□□□ 0.16
VPS26A-209ENST00000497564 ENGASEQ8NFI3 743 aa16.08■□□□□ 0.16
VPS26A-209ENST00000497564 PXYLP1Q8TE99 480 aa16.08■□□□□ 0.16
VPS26A-209ENST00000497564 SYAP1Q96A49 352 aaPredicted RBP16.08■□□□□ 0.16
VPS26A-209ENST00000497564 MOV10L1Q9BXT6 1211 aaKnown RBP16.08■□□□□ 0.16
VPS26A-209ENST00000497564 ACAD9Q9H845 621 aa16.08■□□□□ 0.16
VPS26A-209ENST00000497564 RIPK3Q9Y572 518 aa16.08■□□□□ 0.16
VPS26A-209ENST00000497564 OR52Z1P0C646 297 aa16.07■□□□□ 0.16
VPS26A-209ENST00000497564 FAM160A1Q05DH4 1040 aa16.07■□□□□ 0.16
VPS26A-209ENST00000497564 CCL14Q16627 93 aa16.07■□□□□ 0.16
VPS26A-209ENST00000497564 SHC4Q6S5L8 630 aa16.07■□□□□ 0.16
VPS26A-209ENST00000497564 CCDC73Q6ZRK6 1079 aa16.07■□□□□ 0.16
VPS26A-209ENST00000497564 TRIB2Q92519 343 aa16.07■□□□□ 0.16
VPS26A-209ENST00000497564 SPATC1LQ9H0A9 340 aa16.07■□□□□ 0.16
VPS26A-209ENST00000497564 RNF208Q9H0X6 261 aa16.07■□□□□ 0.16
VPS26A-209ENST00000497564 TMEM60Q9H2L4 133 aa16.07■□□□□ 0.16
VPS26A-209ENST00000497564 GOLPH3LQ9H4A5 285 aa16.07■□□□□ 0.16
VPS26A-209ENST00000497564 DDX19AQ9NUU7 478 aaKnown RBP16.07■□□□□ 0.16
VPS26A-209ENST00000497564 FBXO40Q9UH90 709 aa16.07■□□□□ 0.16
VPS26A-209ENST00000497564 HPSEQ9Y251 543 aa16.07■□□□□ 0.16
VPS26A-209ENST00000497564 MRVI1Q9Y6F6 885 aa16.07■□□□□ 0.16
VPS26A-209ENST00000497564 LOXHD1Q8IVV2 1947 aa16.07■□□□□ 0.16
VPS26A-209ENST00000497564 TDP2O95551 362 aa16.06■□□□□ 0.16
VPS26A-209ENST00000497564 LONP1P36776 959 aaKnown RBP16.06■□□□□ 0.16
VPS26A-209ENST00000497564 RPS6P62753 249 aaKnown RBP16.06■□□□□ 0.16
VPS26A-209ENST00000497564 SNW1Q13573 536 aaKnown RBP16.06■□□□□ 0.16
VPS26A-209ENST00000497564 Q4G0T1 1027 aa16.06■□□□□ 0.16
VPS26A-209ENST00000497564 CAVIN1Q6NZI2 390 aaKnown RBP16.06■□□□□ 0.16
VPS26A-209ENST00000497564 RNF207Q6ZRF8 634 aa16.06■□□□□ 0.16
VPS26A-209ENST00000497564 FCHSD1Q86WN1 690 aa16.06■□□□□ 0.16
VPS26A-209ENST00000497564 SYTL5Q8TDW5 730 aaPredicted RBP16.06■□□□□ 0.16
VPS26A-209ENST00000497564 CLIC6Q96NY7 704 aa16.06■□□□□ 0.16
VPS26A-209ENST00000497564 MTMR9Q96QG7 549 aa16.06■□□□□ 0.16
VPS26A-209ENST00000497564 NUDT12Q9BQG2 462 aa16.06■□□□□ 0.16
VPS26A-209ENST00000497564 HOMER2Q9NSB8 354 aa16.06■□□□□ 0.16
VPS26A-209ENST00000497564 TMEM63CQ9P1W3 806 aa16.06■□□□□ 0.16
VPS26A-209ENST00000497564 COL20A1Q9P218 1284 aa16.06■□□□□ 0.16
VPS26A-209ENST00000497564 ZNF236Q9UL36 1845 aa16.05■□□□□ 0.16
VPS26A-209ENST00000497564 SLC37A4O43826 429 aa16.05■□□□□ 0.16
VPS26A-209ENST00000497564 NR1I2O75469 434 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms