RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 MMP3P08254 477 aa16.71■□□□□ 0.27
CXCL12-208ENST00000496375 RABGGTBP53611 331 aa16.71■□□□□ 0.27
CXCL12-208ENST00000496375 ARHGAP1Q07960 439 aa16.71■□□□□ 0.27
CXCL12-208ENST00000496375 TRDNQ13061 729 aa16.71■□□□□ 0.27
CXCL12-208ENST00000496375 NECTIN1Q15223 517 aa16.71■□□□□ 0.27
CXCL12-208ENST00000496375 CHST3Q7LGC8 479 aa16.71■□□□□ 0.27
CXCL12-208ENST00000496375 PXMP2Q9NR77 195 aa16.71■□□□□ 0.27
CXCL12-208ENST00000496375 MAD2L2Q9UI95 211 aa16.71■□□□□ 0.27
CXCL12-208ENST00000496375 NOD1Q9Y239 953 aa16.71■□□□□ 0.27
CXCL12-208ENST00000496375 TANC1Q9C0D5 1861 aa16.7■□□□□ 0.26
CXCL12-208ENST00000496375 PALM3A6NDB9 673 aaPredicted RBP16.7■□□□□ 0.26
CXCL12-208ENST00000496375 OPLAHO14841 1288 aa16.7■□□□□ 0.26
CXCL12-208ENST00000496375 RETREG2Q8NC44 543 aa16.7■□□□□ 0.26
CXCL12-208ENST00000496375 MTMR8Q96EF0 704 aa16.7■□□□□ 0.26
CXCL12-208ENST00000496375 SLC28A3Q9HAS3 691 aa16.7■□□□□ 0.26
CXCL12-208ENST00000496375 PITPNM1O00562 1244 aa16.69■□□□□ 0.26
CXCL12-208ENST00000496375 ZBTB5O15062 677 aa16.69■□□□□ 0.26
CXCL12-208ENST00000496375 PPP1R11O60927 126 aaPredicted RBP16.69■□□□□ 0.26
CXCL12-208ENST00000496375 EIF3JO75822 258 aaKnown RBP16.69■□□□□ 0.26
CXCL12-208ENST00000496375 NR3C2P08235 984 aa16.69■□□□□ 0.26
CXCL12-208ENST00000496375 IQCF3P0C7M6 154 aa16.69■□□□□ 0.26
CXCL12-208ENST00000496375 ATP2A2P16615 1042 aaKnown RBP16.69■□□□□ 0.26
CXCL12-208ENST00000496375 RFC2P35250 354 aa16.69■□□□□ 0.26
CXCL12-208ENST00000496375 HSD17B4P51659 736 aa16.69■□□□□ 0.26
CXCL12-208ENST00000496375 PPM1EQ8WY54 764 aa16.69■□□□□ 0.26
CXCL12-208ENST00000496375 ANO2Q9NQ90 1003 aa16.69■□□□□ 0.26
CXCL12-208ENST00000496375 DDX41Q9UJV9 622 aaKnown RBP16.69■□□□□ 0.26
CXCL12-208ENST00000496375 PCDHA1Q9Y5I3 950 aa16.69■□□□□ 0.26
CXCL12-208ENST00000496375 MRVI1Q9Y6F6 885 aa16.69■□□□□ 0.26
CXCL12-208ENST00000496375 TRIP12Q14669 1992 aaPredicted RBP16.68■□□□□ 0.26
CXCL12-208ENST00000496375 IFIT3O14879 490 aaKnown RBP16.68■□□□□ 0.26
CXCL12-208ENST00000496375 ACTN1P12814 892 aa16.68■□□□□ 0.26
CXCL12-208ENST00000496375 MYOGP15173 224 aa16.68■□□□□ 0.26
CXCL12-208ENST00000496375 CASTP20810 708 aaKnown RBP16.68■□□□□ 0.26
CXCL12-208ENST00000496375 GHRHRQ02643 423 aa16.68■□□□□ 0.26
CXCL12-208ENST00000496375 BFSP2Q13515 415 aa16.68■□□□□ 0.26
CXCL12-208ENST00000496375 ADGRE1Q14246 886 aa16.68■□□□□ 0.26
CXCL12-208ENST00000496375 GRM4Q14833 912 aa16.68■□□□□ 0.26
CXCL12-208ENST00000496375 HOMER1Q86YM7 354 aa16.68■□□□□ 0.26
CXCL12-208ENST00000496375 KAT2BQ92831 832 aa16.68■□□□□ 0.26
CXCL12-208ENST00000496375 PCDHA11Q9Y5I1 949 aa16.68■□□□□ 0.26
CXCL12-208ENST00000496375 MYH7BA7E2Y1 1941 aa16.68■□□□□ 0.26
CXCL12-208ENST00000496375 BAZ2BQ9UIF8 2168 aaKnown RBP16.68■□□□□ 0.26
CXCL12-208ENST00000496375 ERICH2A1L162 156 aa16.67■□□□□ 0.26
CXCL12-208ENST00000496375 MYCLP12524 364 aaPredicted RBP16.67■□□□□ 0.26
CXCL12-208ENST00000496375 IGFBP4P22692 258 aa16.67■□□□□ 0.26
CXCL12-208ENST00000496375 HOXA13P31271 388 aaPredicted RBP16.67■□□□□ 0.26
CXCL12-208ENST00000496375 PTGISQ16647 500 aa16.67■□□□□ 0.26
CXCL12-208ENST00000496375 DGKDQ16760 1214 aa16.67■□□□□ 0.26
CXCL12-208ENST00000496375 SLC35G1Q2M3R5 365 aa16.67■□□□□ 0.26
CXCL12-208ENST00000496375 TSGA10IPQ3SY00 556 aa16.67■□□□□ 0.26
CXCL12-208ENST00000496375 PPP2R2DQ66LE6 453 aa16.67■□□□□ 0.26
CXCL12-208ENST00000496375 GDF6Q6KF10 455 aaPredicted RBP16.67■□□□□ 0.26
CXCL12-208ENST00000496375 RALYLQ86SE5 291 aaKnown RBP16.67■□□□□ 0.26
CXCL12-208ENST00000496375 SESTD1Q86VW0 696 aa16.67■□□□□ 0.26
CXCL12-208ENST00000496375 EMID1Q96A84 441 aaPredicted RBP16.67■□□□□ 0.26
CXCL12-208ENST00000496375 PDCD2LQ9BRP1 358 aa16.67■□□□□ 0.26
CXCL12-208ENST00000496375 FTOQ9C0B1 505 aaKnown RBP eCLIP16.67■□□□□ 0.26
CXCL12-208ENST00000496375 SENP2Q9HC62 589 aa16.67■□□□□ 0.26
CXCL12-208ENST00000496375 PRDM6Q9NQX0 595 aa16.67■□□□□ 0.26
CXCL12-208ENST00000496375 MAP3K20Q9NYL2 800 aaKnown RBP16.67■□□□□ 0.26
CXCL12-208ENST00000496375 TAF6LQ9Y6J9 622 aa16.67■□□□□ 0.26
CXCL12-208ENST00000496375 TET1Q8NFU7 2136 aa16.66■□□□□ 0.26
CXCL12-208ENST00000496375 E7EWF7 191 aa16.66■□□□□ 0.26
CXCL12-208ENST00000496375 SLC27A2O14975 620 aa16.66■□□□□ 0.26
CXCL12-208ENST00000496375 LAMC2Q13753 1193 aa16.66■□□□□ 0.26
CXCL12-208ENST00000496375 WTAPQ15007 396 aa16.66■□□□□ 0.26
CXCL12-208ENST00000496375 CREB3L3Q68CJ9 461 aa16.66■□□□□ 0.26
CXCL12-208ENST00000496375 STOX1Q6ZVD7 989 aa16.66■□□□□ 0.26
CXCL12-208ENST00000496375 DHX37Q8IY37 1157 aaKnown RBP16.66■□□□□ 0.26
CXCL12-208ENST00000496375 CCDC155Q8N6L0 562 aa16.66■□□□□ 0.26
CXCL12-208ENST00000496375 NCOA7Q8NI08 942 aa16.66■□□□□ 0.26
CXCL12-208ENST00000496375 PPTC7Q8NI37 304 aa16.66■□□□□ 0.26
CXCL12-208ENST00000496375 KCNB2Q92953 911 aa16.66■□□□□ 0.26
CXCL12-208ENST00000496375 CTAGE1Q96RT6 745 aa16.66■□□□□ 0.26
CXCL12-208ENST00000496375 PIGSQ96S52 555 aa16.66■□□□□ 0.26
CXCL12-208ENST00000496375 RIOX1Q9H6W3 641 aa16.66■□□□□ 0.26
CXCL12-208ENST00000496375 CYTH3O43739 400 aa16.65■□□□□ 0.26
CXCL12-208ENST00000496375 RGS20O76081 388 aa16.65■□□□□ 0.26
CXCL12-208ENST00000496375 REC8O95072 547 aa16.65■□□□□ 0.26
CXCL12-208ENST00000496375 PSEN2P49810 448 aa16.65■□□□□ 0.26
CXCL12-208ENST00000496375 TRAF1Q13077 416 aa16.65■□□□□ 0.26
CXCL12-208ENST00000496375 SART3Q15020 963 aaKnown RBP16.65■□□□□ 0.26
CXCL12-208ENST00000496375 PGM5Q15124 567 aa16.65■□□□□ 0.26
CXCL12-208ENST00000496375 SAMD3Q8N6K7 520 aa16.65■□□□□ 0.26
CXCL12-208ENST00000496375 IL31RAQ8NI17 732 aa16.65■□□□□ 0.26
CXCL12-208ENST00000496375 CAGE1Q8TC20 777 aa16.65■□□□□ 0.26
CXCL12-208ENST00000496375 SYMPKQ92797 1274 aaKnown RBP16.65■□□□□ 0.26
CXCL12-208ENST00000496375 SLC9A7Q96T83 725 aa16.65■□□□□ 0.26
CXCL12-208ENST00000496375 ALG1Q9BT22 464 aa16.65■□□□□ 0.26
CXCL12-208ENST00000496375 MTA3Q9BTC8 594 aa16.65■□□□□ 0.26
CXCL12-208ENST00000496375 KATNAL1Q9BW62 490 aa16.65■□□□□ 0.26
CXCL12-208ENST00000496375 HDAC6Q9UBN7 1215 aa16.65■□□□□ 0.26
CXCL12-208ENST00000496375 GTF2IRD1Q9UHL9 959 aa16.65■□□□□ 0.26
CXCL12-208ENST00000496375 REV3LO60673 3130 aa16.64■□□□□ 0.25
CXCL12-208ENST00000496375 GCOM1H8Y6P7 765 aaPredicted RBP16.64■□□□□ 0.25
CXCL12-208ENST00000496375 SORBS3O60504 671 aa16.64■□□□□ 0.25
CXCL12-208ENST00000496375 CA3P07451 260 aa16.64■□□□□ 0.25
CXCL12-208ENST00000496375 POLR2MP0CAP2 368 aa16.64■□□□□ 0.25
CXCL12-208ENST00000496375 ZNF286BP0CG31 522 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms