RNA–Protein interactions for RNA: ENST00000495355.1

YIPF4-204, Transcript of Yip1 domain family member 4, humanhuman

TSL 2

Gene YIPF4, Length 544 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-204ENST00000495355 USP38Q8NB14 1042 aa20.99■□□□□ 0.95
YIPF4-204ENST00000495355 RUFY2Q8WXA3 655 aa20.99■□□□□ 0.95
YIPF4-204ENST00000495355 PIGSQ96S52 555 aa20.99■□□□□ 0.95
YIPF4-204ENST00000495355 GPHNQ9NQX3 736 aaPredicted RBP20.99■□□□□ 0.95
YIPF4-204ENST00000495355 DDX41Q9UJV9 622 aaKnown RBP20.99■□□□□ 0.95
YIPF4-204ENST00000495355 TET1Q8NFU7 2136 aa20.99■□□□□ 0.95
YIPF4-204ENST00000495355 B4DLN1 442 aa20.98■□□□□ 0.95
YIPF4-204ENST00000495355 IFIT3O14879 490 aaKnown RBP20.98■□□□□ 0.95
YIPF4-204ENST00000495355 GH1P01241 217 aa20.98■□□□□ 0.95
YIPF4-204ENST00000495355 MRPL12P52815 198 aaKnown RBP20.98■□□□□ 0.95
YIPF4-204ENST00000495355 FAM47CQ5HY64 1035 aa20.98■□□□□ 0.95
YIPF4-204ENST00000495355 ARHGEF16Q5VV41 709 aa20.98■□□□□ 0.95
YIPF4-204ENST00000495355 IGDCC4Q8TDY8 1250 aa20.98■□□□□ 0.95
YIPF4-204ENST00000495355 PDCD2LQ9BRP1 358 aa20.98■□□□□ 0.95
YIPF4-204ENST00000495355 COL25A1Q9BXS0 654 aaPredicted RBP20.98■□□□□ 0.95
YIPF4-204ENST00000495355 RBM8AQ9Y5S9 174 aaKnown RBP20.98■□□□□ 0.95
YIPF4-204ENST00000495355 KPNA6O60684 536 aa20.97■□□□□ 0.95
YIPF4-204ENST00000495355 SUPT20HL2P0C7V6 817 aa20.97■□□□□ 0.95
YIPF4-204ENST00000495355 HOXA13P31271 388 aaPredicted RBP20.97■□□□□ 0.95
YIPF4-204ENST00000495355 TRDNQ13061 729 aa20.97■□□□□ 0.95
YIPF4-204ENST00000495355 HOMER1Q86YM7 354 aa20.97■□□□□ 0.95
YIPF4-204ENST00000495355 NCOA7Q8NI08 942 aa20.97■□□□□ 0.95
YIPF4-204ENST00000495355 PCDHA1Q9Y5I3 950 aa20.97■□□□□ 0.95
YIPF4-204ENST00000495355 MYH7BA7E2Y1 1941 aa20.97■□□□□ 0.95
YIPF4-204ENST00000495355 EIF3JO75822 258 aaKnown RBP20.96■□□□□ 0.95
YIPF4-204ENST00000495355 PTPN11Q06124 597 aaPredicted RBP20.96■□□□□ 0.95
YIPF4-204ENST00000495355 BRDTQ58F21 947 aaPredicted RBP20.96■□□□□ 0.95
YIPF4-204ENST00000495355 GDF6Q6KF10 455 aaPredicted RBP20.96■□□□□ 0.95
YIPF4-204ENST00000495355 SKAP1Q86WV1 359 aa20.96■□□□□ 0.95
YIPF4-204ENST00000495355 EMID1Q96A84 441 aaPredicted RBP20.96■□□□□ 0.95
YIPF4-204ENST00000495355 NKX2-4Q9H2Z4 354 aa20.96■□□□□ 0.95
YIPF4-204ENST00000495355 PTPRSQ13332 1948 aa20.96■□□□□ 0.95
YIPF4-204ENST00000495355 TRIP12Q14669 1992 aaPredicted RBP20.96■□□□□ 0.95
YIPF4-204ENST00000495355 MYO9BQ13459 2157 aa20.95■□□□□ 0.94
YIPF4-204ENST00000495355 RABGGTBP53611 331 aa20.95■□□□□ 0.94
YIPF4-204ENST00000495355 ADGRE1Q14246 886 aa20.95■□□□□ 0.94
YIPF4-204ENST00000495355 GPNMBQ14956 572 aa20.95■□□□□ 0.94
YIPF4-204ENST00000495355 WTAPQ15007 396 aa20.95■□□□□ 0.94
YIPF4-204ENST00000495355 PGM5Q15124 567 aa20.95■□□□□ 0.94
YIPF4-204ENST00000495355 DEFB128Q7Z7B8 93 aa20.95■□□□□ 0.94
YIPF4-204ENST00000495355 SESTD1Q86VW0 696 aa20.95■□□□□ 0.94
YIPF4-204ENST00000495355 DHX38Q92620 1227 aaKnown RBP20.95■□□□□ 0.94
YIPF4-204ENST00000495355 GPKOWQ92917 476 aaPredicted RBP eCLIP20.95■□□□□ 0.94
YIPF4-204ENST00000495355 ZFP91Q96JP5 570 aaPredicted RBP20.95■□□□□ 0.94
YIPF4-204ENST00000495355 LSG1Q9H089 658 aaKnown RBP20.95■□□□□ 0.94
YIPF4-204ENST00000495355 PRDM12Q9H4Q4 367 aa20.95■□□□□ 0.94
YIPF4-204ENST00000495355 LY9Q9HBG7 655 aa20.95■□□□□ 0.94
YIPF4-204ENST00000495355 PITPNM1O00562 1244 aa20.94■□□□□ 0.94
YIPF4-204ENST00000495355 IQCF3P0C7M6 154 aa20.94■□□□□ 0.94
YIPF4-204ENST00000495355 HOXD8P13378 290 aaPredicted RBP20.94■□□□□ 0.94
YIPF4-204ENST00000495355 MYOGP15173 224 aa20.94■□□□□ 0.94
YIPF4-204ENST00000495355 SP2Q02086 613 aa20.94■□□□□ 0.94
YIPF4-204ENST00000495355 TMEM67Q5HYA8 995 aa20.94■□□□□ 0.94
YIPF4-204ENST00000495355 RALYLQ86SE5 291 aaKnown RBP20.94■□□□□ 0.94
YIPF4-204ENST00000495355 VSIG10LQ86VR7 867 aa20.94■□□□□ 0.94
YIPF4-204ENST00000495355 RPUSD2Q8IZ73 545 aaKnown RBP20.94■□□□□ 0.94
YIPF4-204ENST00000495355 MYL10Q9BUA6 226 aa20.94■□□□□ 0.94
YIPF4-204ENST00000495355 HAS3O00219 553 aa20.93■□□□□ 0.94
YIPF4-204ENST00000495355 HIC1Q14526 733 aa20.93■□□□□ 0.94
YIPF4-204ENST00000495355 RAB30Q15771 203 aa20.93■□□□□ 0.94
YIPF4-204ENST00000495355 BCAS3Q9H6U6 928 aa20.93■□□□□ 0.94
YIPF4-204ENST00000495355 MAP3K20Q9NYL2 800 aaKnown RBP20.93■□□□□ 0.94
YIPF4-204ENST00000495355 MRVI1Q9Y6F6 885 aa20.93■□□□□ 0.94
YIPF4-204ENST00000495355 FRMPD4Q14CM0 1322 aa20.93■□□□□ 0.94
YIPF4-204ENST00000495355 PNMA6FA0A0J9YX94 578 aa20.92■□□□□ 0.94
YIPF4-204ENST00000495355 F2P00734 622 aa20.92■□□□□ 0.94
YIPF4-204ENST00000495355 PFKMP08237 780 aa20.92■□□□□ 0.94
YIPF4-204ENST00000495355 ZNF286BP0CG31 522 aa20.92■□□□□ 0.94
YIPF4-204ENST00000495355 MYCLP12524 364 aaPredicted RBP20.92■□□□□ 0.94
YIPF4-204ENST00000495355 CHMP4BP1P59074 171 aa20.92■□□□□ 0.94
YIPF4-204ENST00000495355 PTGISQ16647 500 aa20.92■□□□□ 0.94
YIPF4-204ENST00000495355 MYSM1Q5VVJ2 828 aa20.92■□□□□ 0.94
YIPF4-204ENST00000495355 PPTC7Q8NI37 304 aa20.92■□□□□ 0.94
YIPF4-204ENST00000495355 MTIF3Q9H2K0 278 aaKnown RBP20.92■□□□□ 0.94
YIPF4-204ENST00000495355 SLC4A7Q9Y6M7 1214 aa20.92■□□□□ 0.94
YIPF4-204ENST00000495355 REV3LO60673 3130 aa20.91■□□□□ 0.94
YIPF4-204ENST00000495355 ERICH2A1L162 156 aa20.91■□□□□ 0.94
YIPF4-204ENST00000495355 SORBS3O60504 671 aa20.91■□□□□ 0.94
YIPF4-204ENST00000495355 CASTP20810 708 aaKnown RBP20.91■□□□□ 0.94
YIPF4-204ENST00000495355 UBA1P22314 1058 aaKnown RBP20.91■□□□□ 0.94
YIPF4-204ENST00000495355 DGKDQ16760 1214 aa20.91■□□□□ 0.94
YIPF4-204ENST00000495355 HSDL1Q3SXM5 330 aa20.91■□□□□ 0.94
YIPF4-204ENST00000495355 ZNF654Q8IZM8 581 aa20.91■□□□□ 0.94
YIPF4-204ENST00000495355 SAMD3Q8N6K7 520 aa20.91■□□□□ 0.94
YIPF4-204ENST00000495355 WNT8BQ93098 351 aa20.91■□□□□ 0.94
YIPF4-204ENST00000495355 ESYT1Q9BSJ8 1104 aa20.91■□□□□ 0.94
YIPF4-204ENST00000495355 PRDM6Q9NQX0 595 aa20.91■□□□□ 0.94
YIPF4-204ENST00000495355 HDAC6Q9UBN7 1215 aa20.91■□□□□ 0.94
YIPF4-204ENST00000495355 GTF2IRD1Q9UHL9 959 aa20.91■□□□□ 0.94
YIPF4-204ENST00000495355 MSRAQ9UJ68 235 aa20.91■□□□□ 0.94
YIPF4-204ENST00000495355 DOCK5Q9H7D0 1870 aa20.9■□□□□ 0.94
YIPF4-204ENST00000495355 ZBBXA8MT70 800 aa20.9■□□□□ 0.94
YIPF4-204ENST00000495355 GCOM1H8Y6P7 765 aaPredicted RBP20.9■□□□□ 0.94
YIPF4-204ENST00000495355 ARHGEF15O94989 841 aa20.9■□□□□ 0.94
YIPF4-204ENST00000495355 POLR2MP0CAP2 368 aa20.9■□□□□ 0.94
YIPF4-204ENST00000495355 RFC2P35250 354 aa20.9■□□□□ 0.94
YIPF4-204ENST00000495355 PSEN2P49810 448 aa20.9■□□□□ 0.94
YIPF4-204ENST00000495355 MRPS9P82933 396 aaKnown RBP20.9■□□□□ 0.94
YIPF4-204ENST00000495355 RBL2Q08999 1139 aa20.9■□□□□ 0.94
YIPF4-204ENST00000495355 SEMA3FQ13275 785 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms