RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 MYBPC3Q14896 1274 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 STK38Q15208 465 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 WASHC4Q2M389 1173 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 ACCSLQ4AC99 568 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 HSP90AB4PQ58FF6 505 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 ZMYM1Q5SVZ6 1142 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 C6orf118Q5T5N4 469 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 CFAP58Q5T655 872 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 RNF187Q5TA31 235 aaPredicted RBP3.02□□□□□ -1.93
MDC1-208ENST00000494654 LCE2CQ5TA81 110 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 THEMIS2Q5TEJ8 643 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 NUTM2GQ5VZR2 741 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 PAPD7Q5XG87 772 aaKnown RBP3.02□□□□□ -1.93
MDC1-208ENST00000494654 NUGGCQ68CJ6 796 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 NCAPH2Q6IBW4 605 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 PPP4R3AQ6IN85 833 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 LRIG3Q6UXM1 1119 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 DNAJC14Q6Y2X3 702 aaPredicted RBP3.02□□□□□ -1.93
MDC1-208ENST00000494654 SESTD1Q86VW0 696 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 MYLK4Q86YV6 388 aaPredicted RBP3.02□□□□□ -1.93
MDC1-208ENST00000494654 TMTC1Q8IUR5 882 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 TRIM42Q8IWZ5 723 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 LMNTD2Q8IXW0 634 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 GSPT2Q8IYD1 628 aaKnown RBP3.02□□□□□ -1.93
MDC1-208ENST00000494654 CCDC116Q8IYX3 515 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 CACNA2D3Q8IZS8 1091 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 DEPDC4Q8N2C3 294 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 PHTF2Q8N3S3 785 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 CCDC155Q8N6L0 562 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 CCDC63Q8NA47 563 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 LINC00301Q8NCQ3 95 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 KLHDC4Q8TBB5 520 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 RHPN1Q8TCX5 695 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 C17orf50Q8WW18 174 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 TBC1D5Q92609 795 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 MAP4K1Q92918 833 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 JAKMIP2Q96AA8 810 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 PPP1R14BQ96C90 147 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 EVI5LQ96CN4 794 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 HVCN1Q96D96 273 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 STAMBPL1Q96FJ0 436 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 IFT43Q96FT9 208 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 GPATCH3Q96I76 525 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 RMDN2Q96LZ7 410 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 ZFP42Q96MM3 310 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 ZIM3Q96PE6 472 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 FMNL2Q96PY5 1086 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 PURBQ96QR8 312 aaKnown RBP3.02□□□□□ -1.93
MDC1-208ENST00000494654 AGXT2Q9BYV1 514 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 OSBPL7Q9BZF2 842 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 TSGA10Q9BZW7 698 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 TRIM7Q9C029 511 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 TRIM4Q9C037 500 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 UBA5Q9GZZ9 404 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 IQCGQ9H095 443 aaKnown RBP3.02□□□□□ -1.93
MDC1-208ENST00000494654 TAF1DQ9H5J8 278 aaPredicted RBP3.02□□□□□ -1.93
MDC1-208ENST00000494654 HAUS4Q9H6D7 363 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 ZNF395Q9H8N7 513 aaPredicted RBP3.02□□□□□ -1.93
MDC1-208ENST00000494654 ZWILCHQ9H900 591 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 C14orf93Q9H972 538 aaKnown RBP3.02□□□□□ -1.93
MDC1-208ENST00000494654 ATP13A2Q9NQ11 1180 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 LZTFL1Q9NQ48 299 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 INCENPQ9NQS7 918 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 PAPOLBQ9NRJ5 636 aaKnown RBP3.02□□□□□ -1.93
MDC1-208ENST00000494654 CWC25Q9NXE8 425 aaPredicted RBP3.02□□□□□ -1.93
MDC1-208ENST00000494654 ANKIB1Q9P2G1 1089 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 WDR35Q9P2L0 1181 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 CIDEBQ9UHD4 219 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 SLC12A6Q9UHW9 1150 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 TMCO1Q9UM00 188 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 PCDHA7Q9UN72 937 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 IQSEC3Q9UPP2 1182 aaPredicted RBP3.02□□□□□ -1.93
MDC1-208ENST00000494654 HPSEQ9Y251 543 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 GPSM3Q9Y4H4 160 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 MAP4K5Q9Y4K4 846 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 EID1Q9Y6B2 187 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 SLC4A7Q9Y6M7 1214 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 ZNF609O15014 1411 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 USP6P35125 1406 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 A0A1B0GVL5 298 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 B4DLN1 442 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 E7EVH7 732 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 STXBP3O00186 592 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 N4BP3O15049 544 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 FYB1O15117 783 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 SPTLC2O15270 562 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 TRAPPC3O43617 180 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 PPP6R2O75170 966 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 ATP6V1G1O75348 118 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 RPSAP08865 295 aaKnown RBP3.01□□□□□ -1.93
MDC1-208ENST00000494654 GSTA2P09210 222 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 CCDC166P0CW27 439 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 ACADSP16219 412 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 KCNA6P17658 529 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 EIF4BP23588 611 aaKnown RBP3.01□□□□□ -1.93
MDC1-208ENST00000494654 CMA1P23946 247 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 CCND1P24385 295 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 RPL13P26373 211 aaKnown RBP3.01□□□□□ -1.93
MDC1-208ENST00000494654 TPP2P29144 1249 aaPredicted RBP3.01□□□□□ -1.93
MDC1-208ENST00000494654 CASP14P31944 242 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms