RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 ZBBXA8MT70 800 aa27.79■■■□□ 2.04
TTC3-224ENST00000494243 ATP2A2P16615 1042 aaKnown RBP27.79■■■□□ 2.04
TTC3-224ENST00000494243 RFC2P35250 354 aa27.79■■■□□ 2.04
TTC3-224ENST00000494243 CHMP4BP1P59074 171 aa27.79■■■□□ 2.04
TTC3-224ENST00000494243 PCDHA11Q9Y5I1 949 aa27.79■■■□□ 2.04
TTC3-224ENST00000494243 U3KPZ7 1027 aaPredicted RBP27.79■■■□□ 2.04
TTC3-224ENST00000494243 TRDNQ13061 729 aa27.78■■■□□ 2.04
TTC3-224ENST00000494243 STOX1Q6ZVD7 989 aa27.78■■■□□ 2.04
TTC3-224ENST00000494243 SESTD1Q86VW0 696 aa27.78■■■□□ 2.04
TTC3-224ENST00000494243 RETREG2Q8NC44 543 aa27.78■■■□□ 2.04
TTC3-224ENST00000494243 RUFY2Q8WXA3 655 aa27.78■■■□□ 2.04
TTC3-224ENST00000494243 EMID1Q96A84 441 aaPredicted RBP27.78■■■□□ 2.04
TTC3-224ENST00000494243 PRDM6Q9NQX0 595 aa27.78■■■□□ 2.04
TTC3-224ENST00000494243 PCDHA1Q9Y5I3 950 aa27.78■■■□□ 2.04
TTC3-224ENST00000494243 RGS20O76081 388 aa27.77■■■□□ 2.04
TTC3-224ENST00000494243 CASTP20810 708 aaKnown RBP27.77■■■□□ 2.04
TTC3-224ENST00000494243 GRM4Q14833 912 aa27.77■■■□□ 2.04
TTC3-224ENST00000494243 PTGISQ16647 500 aa27.77■■■□□ 2.04
TTC3-224ENST00000494243 GDF6Q6KF10 455 aaPredicted RBP27.77■■■□□ 2.04
TTC3-224ENST00000494243 PDCD2LQ9BRP1 358 aa27.77■■■□□ 2.04
TTC3-224ENST00000494243 RIOX1Q9H6W3 641 aa27.77■■■□□ 2.04
TTC3-224ENST00000494243 MAP3K20Q9NYL2 800 aaKnown RBP27.77■■■□□ 2.04
TTC3-224ENST00000494243 VCANP13611 3396 aa27.76■■■□□ 2.03
TTC3-224ENST00000494243 IFIT3O14879 490 aaKnown RBP27.76■■■□□ 2.03
TTC3-224ENST00000494243 BFSP2Q13515 415 aa27.76■■■□□ 2.03
TTC3-224ENST00000494243 NOD1Q9Y239 953 aa27.76■■■□□ 2.03
TTC3-224ENST00000494243 MRVI1Q9Y6F6 885 aa27.76■■■□□ 2.03
TTC3-224ENST00000494243 MYO9BQ13459 2157 aa27.75■■■□□ 2.03
TTC3-224ENST00000494243 TANC1Q9C0D5 1861 aa27.75■■■□□ 2.03
TTC3-224ENST00000494243 E7EWF7 191 aa27.75■■■□□ 2.03
TTC3-224ENST00000494243 CYTH3O43739 400 aa27.75■■■□□ 2.03
TTC3-224ENST00000494243 HOXA13P31271 388 aaPredicted RBP27.75■■■□□ 2.03
TTC3-224ENST00000494243 TROAPQ12815 778 aa27.75■■■□□ 2.03
TTC3-224ENST00000494243 DGKDQ16760 1214 aa27.75■■■□□ 2.03
TTC3-224ENST00000494243 SAMD3Q8N6K7 520 aa27.75■■■□□ 2.03
TTC3-224ENST00000494243 PPM1EQ8WY54 764 aa27.75■■■□□ 2.03
TTC3-224ENST00000494243 PIGSQ96S52 555 aa27.75■■■□□ 2.03
TTC3-224ENST00000494243 SGSM2O43147 1006 aa27.74■■■□□ 2.03
TTC3-224ENST00000494243 ACTN1P12814 892 aa27.74■■■□□ 2.03
TTC3-224ENST00000494243 LAMC2Q13753 1193 aa27.74■■■□□ 2.03
TTC3-224ENST00000494243 GPNMBQ14956 572 aa27.74■■■□□ 2.03
TTC3-224ENST00000494243 PPP2R2DQ66LE6 453 aa27.74■■■□□ 2.03
TTC3-224ENST00000494243 VSIG10LQ86VR7 867 aa27.74■■■□□ 2.03
TTC3-224ENST00000494243 HOMER1Q86YM7 354 aa27.74■■■□□ 2.03
TTC3-224ENST00000494243 IL31RAQ8NI17 732 aa27.74■■■□□ 2.03
TTC3-224ENST00000494243 PPTC7Q8NI37 304 aa27.74■■■□□ 2.03
TTC3-224ENST00000494243 DHX38Q92620 1227 aaKnown RBP27.74■■■□□ 2.03
TTC3-224ENST00000494243 MYCLP12524 364 aaPredicted RBP27.73■■■□□ 2.03
TTC3-224ENST00000494243 IGFBP4P22692 258 aa27.73■■■□□ 2.03
TTC3-224ENST00000494243 IRX6P78412 446 aaPredicted RBP27.73■■■□□ 2.03
TTC3-224ENST00000494243 GTF2IRD1Q9UHL9 959 aa27.73■■■□□ 2.03
TTC3-224ENST00000494243 HAS3O00219 553 aa27.72■■■□□ 2.03
TTC3-224ENST00000494243 HOXD8P13378 290 aaPredicted RBP27.72■■■□□ 2.03
TTC3-224ENST00000494243 PSEN2P49810 448 aa27.72■■■□□ 2.03
TTC3-224ENST00000494243 ANTXR2P58335 489 aa27.72■■■□□ 2.03
TTC3-224ENST00000494243 PGM5Q15124 567 aa27.72■■■□□ 2.03
TTC3-224ENST00000494243 TMEM67Q5HYA8 995 aa27.72■■■□□ 2.03
TTC3-224ENST00000494243 MYSM1Q5VVJ2 828 aa27.72■■■□□ 2.03
TTC3-224ENST00000494243 DHX37Q8IY37 1157 aaKnown RBP27.72■■■□□ 2.03
TTC3-224ENST00000494243 TET1Q8NFU7 2136 aa27.72■■■□□ 2.03
TTC3-224ENST00000494243 NCOA7Q8NI08 942 aa27.72■■■□□ 2.03
TTC3-224ENST00000494243 CAGE1Q8TC20 777 aa27.72■■■□□ 2.03
TTC3-224ENST00000494243 MAP4K1Q92918 833 aa27.72■■■□□ 2.03
TTC3-224ENST00000494243 FTOQ9C0B1 505 aaKnown RBP eCLIP27.72■■■□□ 2.03
TTC3-224ENST00000494243 HDAC6Q9UBN7 1215 aa27.72■■■□□ 2.03
TTC3-224ENST00000494243 TRIP12Q14669 1992 aaPredicted RBP27.71■■■□□ 2.03
TTC3-224ENST00000494243 CHD7Q9P2D1 2997 aa27.71■■■□□ 2.03
TTC3-224ENST00000494243 ERICH2A1L162 156 aa27.71■■■□□ 2.03
TTC3-224ENST00000494243 F2P00734 622 aa27.71■■■□□ 2.03
TTC3-224ENST00000494243 SP2Q02086 613 aa27.71■■■□□ 2.03
TTC3-224ENST00000494243 RBL2Q08999 1139 aa27.71■■■□□ 2.03
TTC3-224ENST00000494243 WTAPQ15007 396 aa27.71■■■□□ 2.03
TTC3-224ENST00000494243 CCDC85BQ15834 202 aaPredicted RBP27.71■■■□□ 2.03
TTC3-224ENST00000494243 RALYLQ86SE5 291 aaKnown RBP27.71■■■□□ 2.03
TTC3-224ENST00000494243 PHOSPHO2Q8TCD6 241 aa27.71■■■□□ 2.03
TTC3-224ENST00000494243 IGDCC4Q8TDY8 1250 aa27.71■■■□□ 2.03
TTC3-224ENST00000494243 AFAP1L1Q8TED9 768 aa27.71■■■□□ 2.03
TTC3-224ENST00000494243 SYMPKQ92797 1274 aaKnown RBP27.71■■■□□ 2.03
TTC3-224ENST00000494243 SLC9A7Q96T83 725 aa27.71■■■□□ 2.03
TTC3-224ENST00000494243 PNMA6FA0A0J9YX94 578 aa27.7■■■□□ 2.02
TTC3-224ENST00000494243 GCOM1H8Y6P7 765 aaPredicted RBP27.7■■■□□ 2.02
TTC3-224ENST00000494243 CA3P07451 260 aa27.7■■■□□ 2.02
TTC3-224ENST00000494243 POLR2MP0CAP2 368 aa27.7■■■□□ 2.02
TTC3-224ENST00000494243 ZNF286BP0CG31 522 aa27.7■■■□□ 2.02
TTC3-224ENST00000494243 TJAP1Q5JTD0 557 aa27.7■■■□□ 2.02
TTC3-224ENST00000494243 CELF3Q5SZQ8 465 aaKnown RBP27.7■■■□□ 2.02
TTC3-224ENST00000494243 KCNV1Q6PIU1 500 aa27.7■■■□□ 2.02
TTC3-224ENST00000494243 CCDC155Q8N6L0 562 aa27.7■■■□□ 2.02
TTC3-224ENST00000494243 C7orf31Q8N865 590 aa27.7■■■□□ 2.02
TTC3-224ENST00000494243 ZFP91Q96JP5 570 aaPredicted RBP27.7■■■□□ 2.02
TTC3-224ENST00000494243 ALG1Q9BT22 464 aa27.7■■■□□ 2.02
TTC3-224ENST00000494243 MYH7BA7E2Y1 1941 aa27.7■■■□□ 2.02
TTC3-224ENST00000494243 BAZ2BQ9UIF8 2168 aaKnown RBP27.7■■■□□ 2.02
TTC3-224ENST00000494243 SPTBN5Q9NRC6 3674 aaKnown RBP27.69■■■□□ 2.02
TTC3-224ENST00000494243 PPFIA4O75335 1185 aa27.69■■■□□ 2.02
TTC3-224ENST00000494243 SELPP16109 830 aa27.69■■■□□ 2.02
TTC3-224ENST00000494243 TRAF1Q13077 416 aa27.69■■■□□ 2.02
TTC3-224ENST00000494243 MFSD10Q14728 455 aa27.69■■■□□ 2.02
TTC3-224ENST00000494243 MB21D2Q8IYB1 491 aaPredicted RBP27.69■■■□□ 2.02
TTC3-224ENST00000494243 KATNAL1Q9BW62 490 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms