RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 ABHD16BQ9H3Z7 469 aa16.95■□□□□ 0.3
ACTB-213ENST00000493945 GJD2Q9UKL4 321 aa16.95■□□□□ 0.3
ACTB-213ENST00000493945 CFAP45Q9UL16 551 aa16.95■□□□□ 0.3
ACTB-213ENST00000493945 ZSWIM8A7E2V4 1837 aa16.95■□□□□ 0.3
ACTB-213ENST00000493945 KIAA1217Q5T5P2 1943 aa16.94■□□□□ 0.3
ACTB-213ENST00000493945 SOWAHBA6NEL2 793 aa16.94■□□□□ 0.3
ACTB-213ENST00000493945 LAD1O00515 517 aa16.94■□□□□ 0.3
ACTB-213ENST00000493945 CCNT1O60563 726 aaKnown RBP16.94■□□□□ 0.3
ACTB-213ENST00000493945 BAG4O95429 457 aaKnown RBP16.94■□□□□ 0.3
ACTB-213ENST00000493945 EDNRBP24530 442 aa16.94■□□□□ 0.3
ACTB-213ENST00000493945 LBX1P52954 281 aa16.94■□□□□ 0.3
ACTB-213ENST00000493945 RESTQ13127 1097 aa16.94■□□□□ 0.3
ACTB-213ENST00000493945 CEP55Q53EZ4 464 aa16.94■□□□□ 0.3
ACTB-213ENST00000493945 TTC38Q5R3I4 469 aa16.94■□□□□ 0.3
ACTB-213ENST00000493945 PPP4R3AQ6IN85 833 aa16.94■□□□□ 0.3
ACTB-213ENST00000493945 OTOP1Q7RTM1 612 aa16.94■□□□□ 0.3
ACTB-213ENST00000493945 VSIG10LQ86VR7 867 aa16.94■□□□□ 0.3
ACTB-213ENST00000493945 GIMAP8Q8ND71 665 aaPredicted RBP16.94■□□□□ 0.3
ACTB-213ENST00000493945 MORC4Q8TE76 937 aa16.94■□□□□ 0.3
ACTB-213ENST00000493945 GPRASP2Q96D09 838 aa16.94■□□□□ 0.3
ACTB-213ENST00000493945 PGBD1Q96JS3 809 aa16.94■□□□□ 0.3
ACTB-213ENST00000493945 MCM3APO60318 1980 aa16.94■□□□□ 0.3
ACTB-213ENST00000493945 LRRC37A2A6NM11 1700 aa16.93■□□□□ 0.3
ACTB-213ENST00000493945 FIBPO43427 364 aa16.93■□□□□ 0.3
ACTB-213ENST00000493945 ADCY3O60266 1144 aa16.93■□□□□ 0.3
ACTB-213ENST00000493945 CIITAP33076 1130 aa16.93■□□□□ 0.3
ACTB-213ENST00000493945 UBXN2AP68543 259 aa16.93■□□□□ 0.3
ACTB-213ENST00000493945 MTMR1Q13613 665 aa16.93■□□□□ 0.3
ACTB-213ENST00000493945 CSPP1Q1MSJ5 1256 aa16.93■□□□□ 0.3
ACTB-213ENST00000493945 SCFD2Q8WU76 684 aa16.93■□□□□ 0.3
ACTB-213ENST00000493945 PRDM10Q9NQV6 1147 aa16.93■□□□□ 0.3
ACTB-213ENST00000493945 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.93■□□□□ 0.3
ACTB-213ENST00000493945 DDX25Q9UHL0 483 aaKnown RBP16.93■□□□□ 0.3
ACTB-213ENST00000493945 KIF28PB7ZC32 967 aa16.92■□□□□ 0.3
ACTB-213ENST00000493945 NEMFO60524 1076 aa16.92■□□□□ 0.3
ACTB-213ENST00000493945 TGFB3P10600 412 aa16.92■□□□□ 0.3
ACTB-213ENST00000493945 ATP2B1P20020 1258 aa16.92■□□□□ 0.3
ACTB-213ENST00000493945 CTGFP29279 349 aa16.92■□□□□ 0.3
ACTB-213ENST00000493945 DDIT3P35638 169 aa16.92■□□□□ 0.3
ACTB-213ENST00000493945 KRT85P78386 507 aa16.92■□□□□ 0.3
ACTB-213ENST00000493945 TTLL4Q14679 1199 aa16.92■□□□□ 0.3
ACTB-213ENST00000493945 SLFN12Q8IYM2 578 aa16.92■□□□□ 0.3
ACTB-213ENST00000493945 NPLOC4Q8TAT6 608 aa16.92■□□□□ 0.3
ACTB-213ENST00000493945 MXRA8Q9BRK3 442 aa16.92■□□□□ 0.3
ACTB-213ENST00000493945 RAB34Q9BZG1 259 aa16.92■□□□□ 0.3
ACTB-213ENST00000493945 ZHX1Q9UKY1 873 aaPredicted RBP16.92■□□□□ 0.3
ACTB-213ENST00000493945 GABRQQ9UN88 632 aa16.92■□□□□ 0.3
ACTB-213ENST00000493945 CEP350Q5VT06 3117 aa16.92■□□□□ 0.3
ACTB-213ENST00000493945 TBX3O15119 743 aa16.91■□□□□ 0.3
ACTB-213ENST00000493945 NKRFO15226 690 aaKnown RBP eCLIP16.91■□□□□ 0.3
ACTB-213ENST00000493945 GRK4P32298 578 aa16.91■□□□□ 0.3
ACTB-213ENST00000493945 TMEM266Q2M3C6 531 aa16.91■□□□□ 0.3
ACTB-213ENST00000493945 SLC9C1Q4G0N8 1177 aa16.91■□□□□ 0.3
ACTB-213ENST00000493945 Q4G0T1 1027 aa16.91■□□□□ 0.3
ACTB-213ENST00000493945 FOXD4L5Q5VV16 416 aaPredicted RBP16.91■□□□□ 0.3
ACTB-213ENST00000493945 PLA2G4DQ86XP0 818 aa16.91■□□□□ 0.3
ACTB-213ENST00000493945 FOXD4L4Q8WXT5 416 aaPredicted RBP16.91■□□□□ 0.3
ACTB-213ENST00000493945 INPP4AQ96PE3 977 aaPredicted RBP16.91■□□□□ 0.3
ACTB-213ENST00000493945 JADE2Q9NQC1 790 aa16.91■□□□□ 0.3
ACTB-213ENST00000493945 PTPN22Q9Y2R2 807 aa16.91■□□□□ 0.3
ACTB-213ENST00000493945 MRVI1Q9Y6F6 885 aa16.91■□□□□ 0.3
ACTB-213ENST00000493945 CYP3A7-CYP3A51PA0A087WV96 503 aa16.9■□□□□ 0.3
ACTB-213ENST00000493945 MSCO60682 206 aa16.9■□□□□ 0.3
ACTB-213ENST00000493945 NCLP19338 710 aaKnown RBP16.9■□□□□ 0.3
ACTB-213ENST00000493945 CYP3A7P24462 503 aa16.9■□□□□ 0.3
ACTB-213ENST00000493945 NEDD9Q14511 834 aa16.9■□□□□ 0.3
ACTB-213ENST00000493945 CALCRLQ16602 461 aa16.9■□□□□ 0.3
ACTB-213ENST00000493945 PRR16Q569H4 304 aa16.9■□□□□ 0.3
ACTB-213ENST00000493945 FBXO46Q6PJ61 603 aaPredicted RBP16.9■□□□□ 0.3
ACTB-213ENST00000493945 CRYGNQ8WXF5 182 aa16.9■□□□□ 0.3
ACTB-213ENST00000493945 FGD4Q96M96 766 aa16.9■□□□□ 0.3
ACTB-213ENST00000493945 PURBQ96QR8 312 aaKnown RBP16.9■□□□□ 0.3
ACTB-213ENST00000493945 SDF4Q9BRK5 362 aa16.9■□□□□ 0.3
ACTB-213ENST00000493945 UBIAD1Q9Y5Z9 338 aa16.9■□□□□ 0.3
ACTB-213ENST00000493945 AKR1A1P14550 325 aa16.89■□□□□ 0.29
ACTB-213ENST00000493945 MCM7P33993 719 aa16.89■□□□□ 0.29
ACTB-213ENST00000493945 ACVR2BQ13705 512 aa16.89■□□□□ 0.29
ACTB-213ENST00000493945 SF3A1Q15459 793 aaKnown RBP16.89■□□□□ 0.29
ACTB-213ENST00000493945 BRDTQ58F21 947 aaPredicted RBP16.89■□□□□ 0.29
ACTB-213ENST00000493945 SEPT14Q6ZU15 432 aa16.89■□□□□ 0.29
ACTB-213ENST00000493945 FBXO16Q8IX29 292 aaPredicted RBP16.89■□□□□ 0.29
ACTB-213ENST00000493945 IL31RAQ8NI17 732 aa16.89■□□□□ 0.29
ACTB-213ENST00000493945 TRIB2Q92519 343 aa16.89■□□□□ 0.29
ACTB-213ENST00000493945 FAM20AQ96MK3 541 aa16.89■□□□□ 0.29
ACTB-213ENST00000493945 ZNF577Q9BSK1 485 aa16.89■□□□□ 0.29
ACTB-213ENST00000493945 SCAND2PQ9GZW5 306 aaPredicted RBP16.89■□□□□ 0.29
ACTB-213ENST00000493945 SPC25Q9HBM1 224 aa16.89■□□□□ 0.29
ACTB-213ENST00000493945 TBC1D22BQ9NU19 505 aa16.89■□□□□ 0.29
ACTB-213ENST00000493945 POLR3EQ9NVU0 708 aa16.89■□□□□ 0.29
ACTB-213ENST00000493945 MEIS1O00470 390 aa16.88■□□□□ 0.29
ACTB-213ENST00000493945 OR52Z1P0C646 297 aa16.88■□□□□ 0.29
ACTB-213ENST00000493945 ICAM3P32942 547 aa16.88■□□□□ 0.29
ACTB-213ENST00000493945 MRPS9P82933 396 aaKnown RBP16.88■□□□□ 0.29
ACTB-213ENST00000493945 PKP1Q13835 747 aa16.88■□□□□ 0.29
ACTB-213ENST00000493945 STK38Q15208 465 aa16.88■□□□□ 0.29
ACTB-213ENST00000493945 IQSEC1Q6DN90 963 aa16.88■□□□□ 0.29
ACTB-213ENST00000493945 EEPD1Q7L9B9 569 aa16.88■□□□□ 0.29
ACTB-213ENST00000493945 GBP4Q96PP9 640 aa16.88■□□□□ 0.29
ACTB-213ENST00000493945 SENP7Q9BQF6 1050 aa16.88■□□□□ 0.29
ACTB-213ENST00000493945 WDR11Q9BZH6 1224 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms