RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 PGBD1Q96JS3 809 aa16■□□□□ 0.15
CCM2-217ENST00000492883 AIFM3Q96NN9 605 aa16■□□□□ 0.15
CCM2-217ENST00000492883 C11orf49Q9H6J7 331 aa16■□□□□ 0.15
CCM2-217ENST00000492883 TMEM260Q9NX78 707 aa16■□□□□ 0.15
CCM2-217ENST00000492883 GNEQ9Y223 722 aaKnown RBP16■□□□□ 0.15
CCM2-217ENST00000492883 MRVI1Q9Y6F6 885 aa16■□□□□ 0.15
CCM2-217ENST00000492883 FRMPD4Q14CM0 1322 aa15.99■□□□□ 0.15
CCM2-217ENST00000492883 SYNRGQ9UMZ2 1314 aa15.99■□□□□ 0.15
CCM2-217ENST00000492883 STAM2O75886 525 aa15.99■□□□□ 0.15
CCM2-217ENST00000492883 GJA9P57773 515 aa15.99■□□□□ 0.15
CCM2-217ENST00000492883 MLLT1Q03111 559 aaPredicted RBP15.99■□□□□ 0.15
CCM2-217ENST00000492883 AP3B2Q13367 1082 aa15.99■□□□□ 0.15
CCM2-217ENST00000492883 PCNX4Q63HM2 1172 aa15.99■□□□□ 0.15
CCM2-217ENST00000492883 MCTP2Q6DN12 878 aa15.99■□□□□ 0.15
CCM2-217ENST00000492883 XRRA1Q6P2D8 792 aa15.99■□□□□ 0.15
CCM2-217ENST00000492883 TLK2Q86UE8 772 aa15.99■□□□□ 0.15
CCM2-217ENST00000492883 REXO1Q8N1G1 1221 aaKnown RBP15.99■□□□□ 0.15
CCM2-217ENST00000492883 ALG1Q9BT22 464 aa15.99■□□□□ 0.15
CCM2-217ENST00000492883 Q9Y3F1 56 aa15.99■□□□□ 0.15
CCM2-217ENST00000492883 NKRFO15226 690 aaKnown RBP eCLIP15.98■□□□□ 0.15
CCM2-217ENST00000492883 JAK2O60674 1132 aa15.98■□□□□ 0.15
CCM2-217ENST00000492883 ADAMTS4O75173 837 aa15.98■□□□□ 0.15
CCM2-217ENST00000492883 FDPSP14324 419 aaKnown RBP15.98■□□□□ 0.15
CCM2-217ENST00000492883 PTGS1P23219 599 aa15.98■□□□□ 0.15
CCM2-217ENST00000492883 CLK2P49760 499 aaKnown RBP15.98■□□□□ 0.15
CCM2-217ENST00000492883 MNX1P50219 401 aaPredicted RBP15.98■□□□□ 0.15
CCM2-217ENST00000492883 MRPS9P82933 396 aaKnown RBP15.98■□□□□ 0.15
CCM2-217ENST00000492883 ST3GAL1Q11201 340 aa15.98■□□□□ 0.15
CCM2-217ENST00000492883 LY6KQ17RY6 165 aa15.98■□□□□ 0.15
CCM2-217ENST00000492883 GNPTABQ3T906 1256 aa15.98■□□□□ 0.15
CCM2-217ENST00000492883 GNASQ5JWF2 1037 aa15.98■□□□□ 0.15
CCM2-217ENST00000492883 KCNV1Q6PIU1 500 aa15.98■□□□□ 0.15
CCM2-217ENST00000492883 UBE2Q1Q7Z7E8 422 aa15.98■□□□□ 0.15
CCM2-217ENST00000492883 NLRX1Q86UT6 975 aa15.98■□□□□ 0.15
CCM2-217ENST00000492883 OR6J1Q8NGC5 347 aa15.98■□□□□ 0.15
CCM2-217ENST00000492883 LLPHQ9BRT6 129 aaKnown RBP15.98■□□□□ 0.15
CCM2-217ENST00000492883 ANO3Q9BYT9 981 aa15.98■□□□□ 0.15
CCM2-217ENST00000492883 SENP6Q9GZR1 1112 aaPredicted RBP15.98■□□□□ 0.15
CCM2-217ENST00000492883 PCDHA4Q9UN74 947 aa15.98■□□□□ 0.15
CCM2-217ENST00000492883 SMCHD1A6NHR9 2005 aa15.97■□□□□ 0.15
CCM2-217ENST00000492883 RGS20O76081 388 aa15.97■□□□□ 0.15
CCM2-217ENST00000492883 ARIH2O95376 493 aa15.97■□□□□ 0.15
CCM2-217ENST00000492883 CD2BP2O95400 341 aaKnown RBP15.97■□□□□ 0.15
CCM2-217ENST00000492883 IRX5P78411 483 aaPredicted RBP15.97■□□□□ 0.15
CCM2-217ENST00000492883 GALNT17Q6IS24 598 aa15.97■□□□□ 0.15
CCM2-217ENST00000492883 CCDC62Q6P9F0 684 aa15.97■□□□□ 0.15
CCM2-217ENST00000492883 BLIDQ8IZY5 108 aa15.97■□□□□ 0.15
CCM2-217ENST00000492883 FAM177A1Q8N128 213 aaPredicted RBP15.97■□□□□ 0.15
CCM2-217ENST00000492883 PCSK9Q8NBP7 692 aaKnown RBP15.97■□□□□ 0.15
CCM2-217ENST00000492883 KLHDC9Q8NEP7 349 aa15.97■□□□□ 0.15
CCM2-217ENST00000492883 RASGRP4Q8TDF6 673 aa15.97■□□□□ 0.15
CCM2-217ENST00000492883 COPS5Q92905 334 aa15.97■□□□□ 0.15
CCM2-217ENST00000492883 TMX3Q96JJ7 454 aa15.97■□□□□ 0.15
CCM2-217ENST00000492883 UPF3AQ9H1J1 476 aaKnown RBP15.97■□□□□ 0.15
CCM2-217ENST00000492883 DDX41Q9UJV9 622 aaKnown RBP15.97■□□□□ 0.15
CCM2-217ENST00000492883 KCNJ14Q9UNX9 436 aa15.97■□□□□ 0.15
CCM2-217ENST00000492883 ZNFX1Q9P2E3 1918 aaKnown RBP15.97■□□□□ 0.15
CCM2-217ENST00000492883 BAZ2BQ9UIF8 2168 aaKnown RBP15.97■□□□□ 0.15
CCM2-217ENST00000492883 MYADML2A6NDP7 307 aa15.96■□□□□ 0.15
CCM2-217ENST00000492883 ADAMTS3O15072 1205 aa15.96■□□□□ 0.15
CCM2-217ENST00000492883 ZEB2O60315 1214 aa15.96■□□□□ 0.15
CCM2-217ENST00000492883 GH1P01241 217 aa15.96■□□□□ 0.15
CCM2-217ENST00000492883 TGFB3P10600 412 aa15.96■□□□□ 0.15
CCM2-217ENST00000492883 ZNF76P36508 570 aa15.96■□□□□ 0.15
CCM2-217ENST00000492883 BEX3Q00994 111 aa15.96■□□□□ 0.15
CCM2-217ENST00000492883 TRIM29Q14134 588 aa15.96■□□□□ 0.15
CCM2-217ENST00000492883 KCNA10Q16322 511 aa15.96■□□□□ 0.15
CCM2-217ENST00000492883 FSCN1Q16658 493 aaKnown RBP15.96■□□□□ 0.15
CCM2-217ENST00000492883 BRDTQ58F21 947 aaPredicted RBP15.96■□□□□ 0.15
CCM2-217ENST00000492883 FERMT2Q96AC1 680 aa15.96■□□□□ 0.15
CCM2-217ENST00000492883 INPP4AQ96PE3 977 aaPredicted RBP15.96■□□□□ 0.15
CCM2-217ENST00000492883 TSEN34Q9BSV6 310 aaKnown RBP15.96■□□□□ 0.15
CCM2-217ENST00000492883 HTATIP2Q9BUP3 242 aa15.96■□□□□ 0.15
CCM2-217ENST00000492883 GJB4Q9NTQ9 266 aa15.96■□□□□ 0.15
CCM2-217ENST00000492883 HTTP42858 3142 aa15.96■□□□□ 0.14
CCM2-217ENST00000492883 SPATA31C2B4DYI2 1134 aa15.95■□□□□ 0.14
CCM2-217ENST00000492883 FIBPO43427 364 aa15.95■□□□□ 0.14
CCM2-217ENST00000492883 COL6A1P12109 1028 aa15.95■□□□□ 0.14
CCM2-217ENST00000492883 CST5P28325 142 aaPredicted RBP15.95■□□□□ 0.14
CCM2-217ENST00000492883 SREBF1P36956 1147 aa15.95■□□□□ 0.14
CCM2-217ENST00000492883 FOSBP53539 338 aa15.95■□□□□ 0.14
CCM2-217ENST00000492883 NKX3-2P78367 333 aa15.95■□□□□ 0.14
CCM2-217ENST00000492883 HMGN5P82970 282 aaKnown RBP15.95■□□□□ 0.14
CCM2-217ENST00000492883 ARHGAP4P98171 946 aa15.95■□□□□ 0.14
CCM2-217ENST00000492883 DHX37Q8IY37 1157 aaKnown RBP15.95■□□□□ 0.14
CCM2-217ENST00000492883 FAM184AQ8NB25 1140 aa15.95■□□□□ 0.14
CCM2-217ENST00000492883 DPF3Q92784 378 aa15.95■□□□□ 0.14
CCM2-217ENST00000492883 VTI1AQ96AJ9 217 aa15.95■□□□□ 0.14
CCM2-217ENST00000492883 PHF20Q9BVI0 1012 aa15.95■□□□□ 0.14
CCM2-217ENST00000492883 UBIAD1Q9Y5Z9 338 aa15.95■□□□□ 0.14
CCM2-217ENST00000492883 PLXNA1Q9UIW2 1896 aa15.95■□□□□ 0.14
CCM2-217ENST00000492883 MOXD2PA6NHM9 499 aa15.94■□□□□ 0.14
CCM2-217ENST00000492883 CTAGE5O15320 804 aa15.94■□□□□ 0.14
CCM2-217ENST00000492883 SORBS3O60504 671 aa15.94■□□□□ 0.14
CCM2-217ENST00000492883 ASGR1P07306 291 aa15.94■□□□□ 0.14
CCM2-217ENST00000492883 ITGB5P18084 799 aa15.94■□□□□ 0.14
CCM2-217ENST00000492883 ICAM3P32942 547 aa15.94■□□□□ 0.14
CCM2-217ENST00000492883 CPT1AP50416 773 aa15.94■□□□□ 0.14
CCM2-217ENST00000492883 ACLYP53396 1101 aa15.94■□□□□ 0.14
CCM2-217ENST00000492883 ATN1P54259 1190 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms