RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 ARHGAP1Q07960 439 aa14.44□□□□□ -0.1
COL6A1-205ENST00000492851 TROAPQ12815 778 aa14.44□□□□□ -0.1
COL6A1-205ENST00000492851 GRIN2CQ14957 1233 aa14.44□□□□□ -0.1
COL6A1-205ENST00000492851 TMEM67Q5HYA8 995 aa14.44□□□□□ -0.1
COL6A1-205ENST00000492851 CASC1Q6TDU7 716 aa14.44□□□□□ -0.1
COL6A1-205ENST00000492851 VSIG10LQ86VR7 867 aa14.44□□□□□ -0.1
COL6A1-205ENST00000492851 DHX37Q8IY37 1157 aaKnown RBP14.44□□□□□ -0.1
COL6A1-205ENST00000492851 CAGE1Q8TC20 777 aa14.44□□□□□ -0.1
COL6A1-205ENST00000492851 GAS2L1Q99501 681 aaPredicted RBP14.44□□□□□ -0.1
COL6A1-205ENST00000492851 LZTS2Q9BRK4 669 aa14.44□□□□□ -0.1
COL6A1-205ENST00000492851 WNT8AQ9H1J5 351 aa14.44□□□□□ -0.1
COL6A1-205ENST00000492851 SLC28A3Q9HAS3 691 aa14.44□□□□□ -0.1
COL6A1-205ENST00000492851 UMODL1Q5DID0 1318 aa14.43□□□□□ -0.1
COL6A1-205ENST00000492851 STAM2O75886 525 aa14.43□□□□□ -0.1
COL6A1-205ENST00000492851 IQCF3P0C7M6 154 aa14.43□□□□□ -0.1
COL6A1-205ENST00000492851 CYP2C9P11712 490 aa14.43□□□□□ -0.1
COL6A1-205ENST00000492851 GNAQP50148 359 aa14.43□□□□□ -0.1
COL6A1-205ENST00000492851 PTGISQ16647 500 aa14.43□□□□□ -0.1
COL6A1-205ENST00000492851 CHST3Q7LGC8 479 aa14.43□□□□□ -0.1
COL6A1-205ENST00000492851 HOMER1Q86YM7 354 aa14.43□□□□□ -0.1
COL6A1-205ENST00000492851 PPTC7Q8NI37 304 aa14.43□□□□□ -0.1
COL6A1-205ENST00000492851 CTCFLQ8NI51 663 aaPredicted RBP14.43□□□□□ -0.1
COL6A1-205ENST00000492851 PHOSPHO2Q8TCD6 241 aa14.43□□□□□ -0.1
COL6A1-205ENST00000492851 PIGSQ96S52 555 aa14.43□□□□□ -0.1
COL6A1-205ENST00000492851 PDCD2LQ9BRP1 358 aa14.43□□□□□ -0.1
COL6A1-205ENST00000492851 GRXCR1A8MXD5 290 aa14.42□□□□□ -0.1
COL6A1-205ENST00000492851 MYCLP12524 364 aaPredicted RBP14.42□□□□□ -0.1
COL6A1-205ENST00000492851 CCND2P30279 289 aa14.42□□□□□ -0.1
COL6A1-205ENST00000492851 MCM5P33992 734 aa14.42□□□□□ -0.1
COL6A1-205ENST00000492851 CHMP4BP1P59074 171 aa14.42□□□□□ -0.1
COL6A1-205ENST00000492851 GNPTABQ3T906 1256 aa14.42□□□□□ -0.1
COL6A1-205ENST00000492851 C7orf31Q8N865 590 aa14.42□□□□□ -0.1
COL6A1-205ENST00000492851 IGDCC4Q8TDY8 1250 aa14.42□□□□□ -0.1
COL6A1-205ENST00000492851 AFAP1L1Q8TED9 768 aa14.42□□□□□ -0.1
COL6A1-205ENST00000492851 SCLYQ96I15 445 aa14.42□□□□□ -0.1
COL6A1-205ENST00000492851 TMEM87BQ96K49 555 aa14.42□□□□□ -0.1
COL6A1-205ENST00000492851 CXXC1Q9P0U4 656 aaPredicted RBP14.42□□□□□ -0.1
COL6A1-205ENST00000492851 PCDHA11Q9Y5I1 949 aa14.42□□□□□ -0.1
COL6A1-205ENST00000492851 RBM8AQ9Y5S9 174 aaKnown RBP14.42□□□□□ -0.1
COL6A1-205ENST00000492851 LCTP09848 1927 aa14.42□□□□□ -0.1
COL6A1-205ENST00000492851 LAMA2P24043 3122 aaKnown RBP14.41□□□□□ -0.1
COL6A1-205ENST00000492851 ZBBXA8MT70 800 aa14.41□□□□□ -0.1
COL6A1-205ENST00000492851 OPLAHO14841 1288 aa14.41□□□□□ -0.1
COL6A1-205ENST00000492851 PPP1R11O60927 126 aaPredicted RBP14.41□□□□□ -0.1
COL6A1-205ENST00000492851 DDAH1O94760 285 aa14.41□□□□□ -0.1
COL6A1-205ENST00000492851 CALM1P0DP23 149 aa14.41□□□□□ -0.1
COL6A1-205ENST00000492851 CALM2P0DP24 149 aa14.41□□□□□ -0.1
COL6A1-205ENST00000492851 CALM3P0DP25 149 aa14.41□□□□□ -0.1
COL6A1-205ENST00000492851 ATP2A2P16615 1042 aaKnown RBP14.41□□□□□ -0.1
COL6A1-205ENST00000492851 PBX2P40425 430 aa14.41□□□□□ -0.1
COL6A1-205ENST00000492851 IRX6P78412 446 aaPredicted RBP14.41□□□□□ -0.1
COL6A1-205ENST00000492851 PGM5Q15124 567 aa14.41□□□□□ -0.1
COL6A1-205ENST00000492851 DEFB128Q7Z7B8 93 aa14.41□□□□□ -0.1
COL6A1-205ENST00000492851 SYMPKQ92797 1274 aaKnown RBP14.41□□□□□ -0.1
COL6A1-205ENST00000492851 RRP36Q96EU6 259 aaKnown RBP14.41□□□□□ -0.1
COL6A1-205ENST00000492851 SLC9A7Q96T83 725 aa14.41□□□□□ -0.1
COL6A1-205ENST00000492851 FTOQ9C0B1 505 aaKnown RBP eCLIP14.41□□□□□ -0.1
COL6A1-205ENST00000492851 SEC63Q9UGP8 760 aaKnown RBP14.41□□□□□ -0.1
COL6A1-205ENST00000492851 CCDC69A6NI79 296 aa14.4□□□□□ -0.1
COL6A1-205ENST00000492851 KIF28PB7ZC32 967 aa14.4□□□□□ -0.1
COL6A1-205ENST00000492851 BAIAP3O94812 1187 aa14.4□□□□□ -0.1
COL6A1-205ENST00000492851 HOXA13P31271 388 aaPredicted RBP14.4□□□□□ -0.1
COL6A1-205ENST00000492851 CELF3Q5SZQ8 465 aaKnown RBP14.4□□□□□ -0.1
COL6A1-205ENST00000492851 MYSM1Q5VVJ2 828 aa14.4□□□□□ -0.1
COL6A1-205ENST00000492851 XRRA1Q6P2D8 792 aa14.4□□□□□ -0.1
COL6A1-205ENST00000492851 MB21D2Q8IYB1 491 aaPredicted RBP14.4□□□□□ -0.1
COL6A1-205ENST00000492851 KAT2BQ92831 832 aa14.4□□□□□ -0.1
COL6A1-205ENST00000492851 CUL5Q93034 780 aa14.4□□□□□ -0.1
COL6A1-205ENST00000492851 SPZ1Q9BXG8 430 aa14.4□□□□□ -0.1
COL6A1-205ENST00000492851 MLXIPQ9HAP2 919 aa14.4□□□□□ -0.1
COL6A1-205ENST00000492851 GTF2IRD1Q9UHL9 959 aa14.4□□□□□ -0.1
COL6A1-205ENST00000492851 CYTH3O43739 400 aa14.39□□□□□ -0.11
COL6A1-205ENST00000492851 F2P00734 622 aa14.39□□□□□ -0.11
COL6A1-205ENST00000492851 HOXD8P13378 290 aaPredicted RBP14.39□□□□□ -0.11
COL6A1-205ENST00000492851 SELPP16109 830 aa14.39□□□□□ -0.11
COL6A1-205ENST00000492851 LIFRP42702 1097 aa14.39□□□□□ -0.11
COL6A1-205ENST00000492851 PSEN2P49810 448 aa14.39□□□□□ -0.11
COL6A1-205ENST00000492851 NEDD9Q14511 834 aa14.39□□□□□ -0.11
COL6A1-205ENST00000492851 MFSD10Q14728 455 aa14.39□□□□□ -0.11
COL6A1-205ENST00000492851 RNF20Q5VTR2 975 aa14.39□□□□□ -0.11
COL6A1-205ENST00000492851 NFXL1Q6ZNB6 911 aa14.39□□□□□ -0.11
COL6A1-205ENST00000492851 FCHSD1Q86WN1 690 aa14.39□□□□□ -0.11
COL6A1-205ENST00000492851 ZNF654Q8IZM8 581 aa14.39□□□□□ -0.11
COL6A1-205ENST00000492851 SPATA33Q96N06 139 aa14.39□□□□□ -0.11
COL6A1-205ENST00000492851 HAS3O00219 553 aa14.38□□□□□ -0.11
COL6A1-205ENST00000492851 PIK3CDO00329 1044 aa14.38□□□□□ -0.11
COL6A1-205ENST00000492851 PRC1O43663 620 aa14.38□□□□□ -0.11
COL6A1-205ENST00000492851 EFCAB14O75071 495 aa14.38□□□□□ -0.11
COL6A1-205ENST00000492851 GGPS1O95749 300 aa14.38□□□□□ -0.11
COL6A1-205ENST00000492851 ANTXR2P58335 489 aa14.38□□□□□ -0.11
COL6A1-205ENST00000492851 RBL2Q08999 1139 aa14.38□□□□□ -0.11
COL6A1-205ENST00000492851 PTK7Q13308 1070 aa14.38□□□□□ -0.11
COL6A1-205ENST00000492851 KIAA0753Q2KHM9 967 aa14.38□□□□□ -0.11
COL6A1-205ENST00000492851 PPP2R2DQ66LE6 453 aa14.38□□□□□ -0.11
COL6A1-205ENST00000492851 GDF6Q6KF10 455 aaPredicted RBP14.38□□□□□ -0.11
COL6A1-205ENST00000492851 SYNE3Q6ZMZ3 975 aa14.38□□□□□ -0.11
COL6A1-205ENST00000492851 GIMAP8Q8ND71 665 aaPredicted RBP14.38□□□□□ -0.11
COL6A1-205ENST00000492851 SMARCC2Q8TAQ2 1214 aa14.38□□□□□ -0.11
COL6A1-205ENST00000492851 COL25A1Q9BXS0 654 aaPredicted RBP14.38□□□□□ -0.11
COL6A1-205ENST00000492851 USP26Q9BXU7 913 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms