RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 CHD9Q3L8U1 2897 aa20.03■□□□□ 0.8
SGMS1-204ENST00000492601 CYTH3O43739 400 aa20.02■□□□□ 0.8
SGMS1-204ENST00000492601 EIF3JO75822 258 aaKnown RBP20.02■□□□□ 0.8
SGMS1-204ENST00000492601 MMP3P08254 477 aa20.02■□□□□ 0.8
SGMS1-204ENST00000492601 GRIN2CQ14957 1233 aa20.02■□□□□ 0.8
SGMS1-204ENST00000492601 NFRKBQ6P4R8 1299 aa20.02■□□□□ 0.8
SGMS1-204ENST00000492601 CATIPQ7Z7H3 387 aa20.02■□□□□ 0.8
SGMS1-204ENST00000492601 IGDCC4Q8TDY8 1250 aa20.02■□□□□ 0.8
SGMS1-204ENST00000492601 PBX4Q9BYU1 374 aa20.02■□□□□ 0.8
SGMS1-204ENST00000492601 DDX41Q9UJV9 622 aaKnown RBP20.02■□□□□ 0.8
SGMS1-204ENST00000492601 MRVI1Q9Y6F6 885 aa20.02■□□□□ 0.8
SGMS1-204ENST00000492601 FOSL2P15408 326 aa20.01■□□□□ 0.79
SGMS1-204ENST00000492601 GHRHRQ02643 423 aa20.01■□□□□ 0.79
SGMS1-204ENST00000492601 SKAP1Q86WV1 359 aa20.01■□□□□ 0.79
SGMS1-204ENST00000492601 MAFAQ8NHW3 353 aaPredicted RBP20.01■□□□□ 0.79
SGMS1-204ENST00000492601 PDCD2LQ9BRP1 358 aa20.01■□□□□ 0.79
SGMS1-204ENST00000492601 MYL10Q9BUA6 226 aa20.01■□□□□ 0.79
SGMS1-204ENST00000492601 MTIF3Q9H2K0 278 aaKnown RBP20.01■□□□□ 0.79
SGMS1-204ENST00000492601 ZNF576Q9H609 170 aa20.01■□□□□ 0.79
SGMS1-204ENST00000492601 PNMA6FA0A0J9YX94 578 aa20■□□□□ 0.79
SGMS1-204ENST00000492601 DEFB128Q7Z7B8 93 aa20■□□□□ 0.79
SGMS1-204ENST00000492601 FCHSD1Q86WN1 690 aa20■□□□□ 0.79
SGMS1-204ENST00000492601 RPUSD2Q8IZ73 545 aaKnown RBP20■□□□□ 0.79
SGMS1-204ENST00000492601 IL31RAQ8NI17 732 aa20■□□□□ 0.79
SGMS1-204ENST00000492601 VWCEQ96DN2 955 aa20■□□□□ 0.79
SGMS1-204ENST00000492601 ZFP91Q96JP5 570 aaPredicted RBP20■□□□□ 0.79
SGMS1-204ENST00000492601 LSG1Q9H089 658 aaKnown RBP20■□□□□ 0.79
SGMS1-204ENST00000492601 LY9Q9HBG7 655 aa20■□□□□ 0.79
SGMS1-204ENST00000492601 MAP3K20Q9NYL2 800 aaKnown RBP20■□□□□ 0.79
SGMS1-204ENST00000492601 NOD1Q9Y239 953 aa20■□□□□ 0.79
SGMS1-204ENST00000492601 ZBBXA8MT70 800 aa19.99■□□□□ 0.79
SGMS1-204ENST00000492601 GCOM1H8Y6P7 765 aaPredicted RBP19.99■□□□□ 0.79
SGMS1-204ENST00000492601 PRC1O43663 620 aa19.99■□□□□ 0.79
SGMS1-204ENST00000492601 SORBS3O60504 671 aa19.99■□□□□ 0.79
SGMS1-204ENST00000492601 POLR2MP0CAP2 368 aa19.99■□□□□ 0.79
SGMS1-204ENST00000492601 CASTP20810 708 aaKnown RBP19.99■□□□□ 0.79
SGMS1-204ENST00000492601 PTPN11Q06124 597 aaPredicted RBP19.99■□□□□ 0.79
SGMS1-204ENST00000492601 TRAF1Q13077 416 aa19.99■□□□□ 0.79
SGMS1-204ENST00000492601 PGM5Q15124 567 aa19.99■□□□□ 0.79
SGMS1-204ENST00000492601 CASC1Q6TDU7 716 aa19.99■□□□□ 0.79
SGMS1-204ENST00000492601 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.99■□□□□ 0.79
SGMS1-204ENST00000492601 ZNF654Q8IZM8 581 aa19.99■□□□□ 0.79
SGMS1-204ENST00000492601 ESYT1Q9BSJ8 1104 aa19.99■□□□□ 0.79
SGMS1-204ENST00000492601 KAT6AQ92794 2004 aa19.98■□□□□ 0.79
SGMS1-204ENST00000492601 RGS20O76081 388 aa19.98■□□□□ 0.79
SGMS1-204ENST00000492601 COL9A3Q14050 684 aaPredicted RBP19.98■□□□□ 0.79
SGMS1-204ENST00000492601 DGKDQ16760 1214 aa19.98■□□□□ 0.79
SGMS1-204ENST00000492601 VSIG10LQ86VR7 867 aa19.98■□□□□ 0.79
SGMS1-204ENST00000492601 DHX37Q8IY37 1157 aaKnown RBP19.98■□□□□ 0.79
SGMS1-204ENST00000492601 KAT2BQ92831 832 aa19.98■□□□□ 0.79
SGMS1-204ENST00000492601 MSRAQ9UJ68 235 aa19.98■□□□□ 0.79
SGMS1-204ENST00000492601 PTPRSQ13332 1948 aa19.98■□□□□ 0.79
SGMS1-204ENST00000492601 CHD7Q9P2D1 2997 aa19.98■□□□□ 0.79
SGMS1-204ENST00000492601 VCANP13611 3396 aa19.97■□□□□ 0.79
SGMS1-204ENST00000492601 SLC27A2O14975 620 aa19.97■□□□□ 0.79
SGMS1-204ENST00000492601 MCM5P33992 734 aa19.97■□□□□ 0.79
SGMS1-204ENST00000492601 LAMC2Q13753 1193 aa19.97■□□□□ 0.79
SGMS1-204ENST00000492601 PTGISQ16647 500 aa19.97■□□□□ 0.79
SGMS1-204ENST00000492601 NFXL1Q6ZNB6 911 aa19.97■□□□□ 0.79
SGMS1-204ENST00000492601 SAMD3Q8N6K7 520 aa19.97■□□□□ 0.79
SGMS1-204ENST00000492601 RETREG2Q8NC44 543 aa19.97■□□□□ 0.79
SGMS1-204ENST00000492601 CTCFLQ8NI51 663 aaPredicted RBP19.97■□□□□ 0.79
SGMS1-204ENST00000492601 EMID1Q96A84 441 aaPredicted RBP19.97■□□□□ 0.79
SGMS1-204ENST00000492601 ALG1Q9BT22 464 aa19.97■□□□□ 0.79
SGMS1-204ENST00000492601 ANO2Q9NQ90 1003 aa19.97■□□□□ 0.79
SGMS1-204ENST00000492601 SLC4A7Q9Y6M7 1214 aa19.97■□□□□ 0.79
SGMS1-204ENST00000492601 DDAH1O94760 285 aa19.96■□□□□ 0.79
SGMS1-204ENST00000492601 ZNF286BP0CG31 522 aa19.96■□□□□ 0.79
SGMS1-204ENST00000492601 CCND2P30279 289 aa19.96■□□□□ 0.79
SGMS1-204ENST00000492601 RABGGTBP53611 331 aa19.96■□□□□ 0.79
SGMS1-204ENST00000492601 RAB30Q15771 203 aa19.96■□□□□ 0.79
SGMS1-204ENST00000492601 CREB3L3Q68CJ9 461 aa19.96■□□□□ 0.79
SGMS1-204ENST00000492601 GDF6Q6KF10 455 aaPredicted RBP19.96■□□□□ 0.79
SGMS1-204ENST00000492601 GPKOWQ92917 476 aaPredicted RBP eCLIP19.96■□□□□ 0.79
SGMS1-204ENST00000492601 NKX2-4Q9H2Z4 354 aa19.96■□□□□ 0.79
SGMS1-204ENST00000492601 CCDC69A6NI79 296 aa19.95■□□□□ 0.78
SGMS1-204ENST00000492601 PITPNM1O00562 1244 aa19.95■□□□□ 0.78
SGMS1-204ENST00000492601 SH2B2O14492 632 aaPredicted RBP19.95■□□□□ 0.78
SGMS1-204ENST00000492601 GGPS1O95749 300 aa19.95■□□□□ 0.78
SGMS1-204ENST00000492601 IQCF3P0C7M6 154 aa19.95■□□□□ 0.78
SGMS1-204ENST00000492601 RXRAP19793 462 aa19.95■□□□□ 0.78
SGMS1-204ENST00000492601 KIF5BP33176 963 aa19.95■□□□□ 0.78
SGMS1-204ENST00000492601 PSEN2P49810 448 aa19.95■□□□□ 0.78
SGMS1-204ENST00000492601 SP2Q02086 613 aa19.95■□□□□ 0.78
SGMS1-204ENST00000492601 BFSP2Q13515 415 aa19.95■□□□□ 0.78
SGMS1-204ENST00000492601 MYSM1Q5VVJ2 828 aa19.95■□□□□ 0.78
SGMS1-204ENST00000492601 RAB11FIP4Q86YS3 637 aa19.95■□□□□ 0.78
SGMS1-204ENST00000492601 PPTC7Q8NI37 304 aa19.95■□□□□ 0.78
SGMS1-204ENST00000492601 RRP36Q96EU6 259 aaKnown RBP19.95■□□□□ 0.78
SGMS1-204ENST00000492601 CTAGE1Q96RT6 745 aa19.95■□□□□ 0.78
SGMS1-204ENST00000492601 MAP3K14Q99558 947 aa19.95■□□□□ 0.78
SGMS1-204ENST00000492601 SPZ1Q9BXG8 430 aa19.95■□□□□ 0.78
SGMS1-204ENST00000492601 LRRC2Q9BYS8 371 aa19.95■□□□□ 0.78
SGMS1-204ENST00000492601 HDAC6Q9UBN7 1215 aa19.95■□□□□ 0.78
SGMS1-204ENST00000492601 YBX2Q9Y2T7 364 aaKnown RBP19.95■□□□□ 0.78
SGMS1-204ENST00000492601 PLEKHA8P1O95397 391 aa19.94■□□□□ 0.78
SGMS1-204ENST00000492601 PFKMP08237 780 aa19.94■□□□□ 0.78
SGMS1-204ENST00000492601 MFSD10Q14728 455 aa19.94■□□□□ 0.78
SGMS1-204ENST00000492601 CELF3Q5SZQ8 465 aaKnown RBP19.94■□□□□ 0.78
SGMS1-204ENST00000492601 KCNV1Q6PIU1 500 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms