RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 PFKFB3Q16875 520 aaPredicted RBP23.04■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 ZBTB1Q9Y2K1 713 aa23.04■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 DEPDC5O75140 1603 aa23.04■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 MROH2AA6NES4 1674 aa23.04■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 FAM170AA1A519 330 aa23.04■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 CYP2J2P51589 502 aa23.04■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 SEMA3FQ13275 785 aa23.04■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 BRIP1Q9BX63 1249 aa23.04■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 HPCAL4Q9UM19 191 aa23.04■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 RFX5P48382 616 aaPredicted RBP23.04■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 CCDC62Q6P9F0 684 aa23.04■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 N4BP2L2Q92802 583 aaPredicted RBP23.04■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 ADAMTS1Q9UHI8 967 aa23.04■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 VWDEQ8N2E2 1590 aa23.04■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 CCDC160A6NGH7 325 aa23.04■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 PLTPP55058 493 aa23.04■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 DPYDQ12882 1025 aa23.04■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 HIBCHQ6NVY1 386 aaPredicted RBP23.04■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 ENAHQ8N8S7 591 aaPredicted RBP23.04■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 IGDCC4Q8TDY8 1250 aa23.04■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 MAGOHBQ96A72 148 aaKnown RBP23.04■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 HPS5Q9UPZ3 1129 aa23.04■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 CEMIPQ8WUJ3 1361 aa23.03■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 LRRC53A6NM62 1247 aa23.03■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 CCDC188H7C350 402 aa23.03■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 LUC7L3O95232 432 aaKnown RBP23.03■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 BIRC3Q13489 604 aa23.03■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 SEPT2Q15019 361 aa23.03■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 RDH13Q8NBN7 331 aa23.03■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 SPATA4Q8NEY3 305 aa23.03■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 FRMD3A2A2Y4 597 aa23.03■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 GUCY2CP25092 1073 aa23.03■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 CCDC13Q8IYE1 715 aa23.03■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 GRK7Q8WTQ7 553 aa23.03■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 CDCA7Q9BWT1 371 aaPredicted RBP23.03■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 EXOC7Q9UPT5 735 aa23.03■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 RIMBP2O15034 1052 aa23.03■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 BEND6Q5SZJ8 279 aaPredicted RBP23.03■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 CCNI2Q6ZMN8 369 aaPredicted RBP23.03■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 VPS52Q8N1B4 723 aa23.03■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 GGA1Q9UJY5 639 aa23.03■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 A0A0G2JLW4 131 aa23.03■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 SMTNP53814 917 aa23.03■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 AP1M1Q9BXS5 423 aa23.03■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 GSG1L2A8MUP6 293 aa23.02■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 GYPCP04921 128 aa23.02■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 FMO2Q99518 471 aa23.02■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 TYW1Q9NV66 732 aaKnown RBP23.02■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 THAP12O43422 761 aa23.02■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 NOA1Q8NC60 698 aaKnown RBP23.02■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 NEK9Q8TD19 979 aa23.02■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 ZNF219Q9P2Y4 722 aaPredicted RBP23.02■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 SNX12Q9UMY4 172 aa23.02■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 AXIN2Q9Y2T1 843 aa23.02■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 MAP2P11137 1827 aaKnown RBP23.02■■□□□ 1.28
CHKB-CPT1B-203ENST00000492556 CLGNO14967 610 aa23.01■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 N4BP1O75113 896 aaKnown RBP23.01■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 NCAPHQ15003 741 aa23.01■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 TPH2Q8IWU9 490 aa23.01■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 FNBP1Q96RU3 617 aa23.01■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 ADCY8P40145 1251 aa23.01■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 PRR16Q569H4 304 aa23.01■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 UNC13DQ70J99 1090 aa23.01■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 TSNARE1Q96NA8 513 aa23.01■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 CEP72Q9P209 647 aa23.01■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 PSMD14O00487 310 aa23.01■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 SUGCTQ9HAC7 445 aa23.01■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 KCND1Q9NSA2 647 aa23.01■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 PKD2L1Q9P0L9 805 aa23.01■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 KIF20BQ96Q89 1820 aa23.01■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 NLRP14Q86W24 1093 aa23.01■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 HPSEQ9Y251 543 aa23.01■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 PPLO60437 1756 aa23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 TRIM68Q6AZZ1 485 aa23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 PNKPQ96T60 521 aa23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 SERPINA10Q9UK55 444 aa23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 ERVV-1B6SEH8 477 aa23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 GNPATO15228 680 aa23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 NCK2O43639 380 aa23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 TROVE2P10155 538 aaKnown RBP eCLIP23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 CNBD1Q8NA66 436 aa23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 MSANTD4Q8NCY6 345 aa23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 LRRC1Q9BTT6 524 aa23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 VPS37BQ9H9H4 285 aa23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 PTPAQ15257 358 aa23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 P3H4Q92791 437 aa23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 ATP6V1G3Q96LB4 118 aa23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 AGTPBP1Q9UPW5 1226 aa23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 GRID2IPA4D2P6 1211 aa23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 hCG_1984214I3L0E3 225 aa23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 NDC80O14777 642 aa23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 GFPT1Q06210 699 aaPredicted RBP23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 MUM1Q2TAK8 710 aa23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 USH1GQ495M9 461 aa23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 LRCH2Q5VUJ6 765 aa23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 MAEAQ7L5Y9 396 aa23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 DGKHQ86XP1 1220 aa23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 LRRC47Q8N1G4 583 aaKnown RBP23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 ZNF713Q8N859 430 aaPredicted RBP23■■□□□ 1.27
CHKB-CPT1B-203ENST00000492556 GJA10Q969M2 543 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms