RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 CHMP4BP1P59074 171 aa9.57□□□□□ -0.88
LSM2-213ENST00000491421 ARHGAP1Q07960 439 aa9.57□□□□□ -0.88
LSM2-213ENST00000491421 CREB3L3Q68CJ9 461 aa9.57□□□□□ -0.88
LSM2-213ENST00000491421 NFRKBQ6P4R8 1299 aa9.57□□□□□ -0.88
LSM2-213ENST00000491421 NFXL1Q6ZNB6 911 aa9.57□□□□□ -0.88
LSM2-213ENST00000491421 SKAP1Q86WV1 359 aa9.57□□□□□ -0.88
LSM2-213ENST00000491421 ZNF654Q8IZM8 581 aa9.57□□□□□ -0.88
LSM2-213ENST00000491421 AFG1LQ8WV93 481 aa9.57□□□□□ -0.88
LSM2-213ENST00000491421 PIBF1Q8WXW3 757 aa9.57□□□□□ -0.88
LSM2-213ENST00000491421 MAP3K14Q99558 947 aa9.57□□□□□ -0.88
LSM2-213ENST00000491421 PDCD2LQ9BRP1 358 aa9.57□□□□□ -0.88
LSM2-213ENST00000491421 MTA3Q9BTC8 594 aa9.57□□□□□ -0.88
LSM2-213ENST00000491421 MYL10Q9BUA6 226 aa9.57□□□□□ -0.88
LSM2-213ENST00000491421 WNT8AQ9H1J5 351 aa9.57□□□□□ -0.88
LSM2-213ENST00000491421 SEMA6BQ9H3T3 888 aa9.57□□□□□ -0.88
LSM2-213ENST00000491421 MRVI1Q9Y6F6 885 aa9.57□□□□□ -0.88
LSM2-213ENST00000491421 TMEM265A0A087WTH1 108 aa9.56□□□□□ -0.88
LSM2-213ENST00000491421 CCDC69A6NI79 296 aa9.56□□□□□ -0.88
LSM2-213ENST00000491421 SH2B2O14492 632 aaPredicted RBP9.56□□□□□ -0.88
LSM2-213ENST00000491421 FGBP02675 491 aa9.56□□□□□ -0.88
LSM2-213ENST00000491421 MMP3P08254 477 aa9.56□□□□□ -0.88
LSM2-213ENST00000491421 CASTP20810 708 aaKnown RBP9.56□□□□□ -0.88
LSM2-213ENST00000491421 DNAJB2P25686 324 aa9.56□□□□□ -0.88
LSM2-213ENST00000491421 PTPN11Q06124 597 aaPredicted RBP9.56□□□□□ -0.88
LSM2-213ENST00000491421 PGM5Q15124 567 aa9.56□□□□□ -0.88
LSM2-213ENST00000491421 DGKDQ16760 1214 aa9.56□□□□□ -0.88
LSM2-213ENST00000491421 RASIP1Q5U651 963 aa9.56□□□□□ -0.88
LSM2-213ENST00000491421 FCHSD1Q86WN1 690 aa9.56□□□□□ -0.88
LSM2-213ENST00000491421 TMTC2Q8N394 836 aa9.56□□□□□ -0.88
LSM2-213ENST00000491421 PPP1R13LQ8WUF5 828 aa9.56□□□□□ -0.88
LSM2-213ENST00000491421 HERVK_113Q902F9 699 aa9.56□□□□□ -0.88
LSM2-213ENST00000491421 RRP36Q96EU6 259 aaKnown RBP9.56□□□□□ -0.88
LSM2-213ENST00000491421 SCLYQ96I15 445 aa9.56□□□□□ -0.88
LSM2-213ENST00000491421 TMEM87BQ96K49 555 aa9.56□□□□□ -0.88
LSM2-213ENST00000491421 CDX2Q99626 313 aaPredicted RBP9.56□□□□□ -0.88
LSM2-213ENST00000491421 SPZ1Q9BXG8 430 aa9.56□□□□□ -0.88
LSM2-213ENST00000491421 MTIF3Q9H2K0 278 aaKnown RBP9.56□□□□□ -0.88
LSM2-213ENST00000491421 TTYH1Q9H313 450 aaPredicted RBP9.56□□□□□ -0.88
LSM2-213ENST00000491421 SEC63Q9UGP8 760 aaKnown RBP9.56□□□□□ -0.88
LSM2-213ENST00000491421 DDX41Q9UJV9 622 aaKnown RBP9.56□□□□□ -0.88
LSM2-213ENST00000491421 NOD1Q9Y239 953 aa9.56□□□□□ -0.88
LSM2-213ENST00000491421 A0A0C4DFX4 3053 aa9.55□□□□□ -0.88
LSM2-213ENST00000491421 RGS20O76081 388 aa9.55□□□□□ -0.88
LSM2-213ENST00000491421 PLEKHA8P1O95397 391 aa9.55□□□□□ -0.88
LSM2-213ENST00000491421 CALM1P0DP23 149 aa9.55□□□□□ -0.88
LSM2-213ENST00000491421 CALM2P0DP24 149 aa9.55□□□□□ -0.88
LSM2-213ENST00000491421 CALM3P0DP25 149 aa9.55□□□□□ -0.88
LSM2-213ENST00000491421 CCND2P30279 289 aa9.55□□□□□ -0.88
LSM2-213ENST00000491421 GNAQP50148 359 aa9.55□□□□□ -0.88
LSM2-213ENST00000491421 LAMC2Q13753 1193 aa9.55□□□□□ -0.88
LSM2-213ENST00000491421 NECTIN1Q15223 517 aa9.55□□□□□ -0.88
LSM2-213ENST00000491421 RNF20Q5VTR2 975 aa9.55□□□□□ -0.88
LSM2-213ENST00000491421 KCNV1Q6PIU1 500 aa9.55□□□□□ -0.88
LSM2-213ENST00000491421 OTOP2Q7RTS6 562 aa9.55□□□□□ -0.88
LSM2-213ENST00000491421 VSIG10LQ86VR7 867 aa9.55□□□□□ -0.88
LSM2-213ENST00000491421 DHX37Q8IY37 1157 aaKnown RBP9.55□□□□□ -0.88
LSM2-213ENST00000491421 RPUSD2Q8IZ73 545 aaKnown RBP9.55□□□□□ -0.88
LSM2-213ENST00000491421 IL31RAQ8NI17 732 aa9.55□□□□□ -0.88
LSM2-213ENST00000491421 PPTC7Q8NI37 304 aa9.55□□□□□ -0.88
LSM2-213ENST00000491421 EMID1Q96A84 441 aaPredicted RBP9.55□□□□□ -0.88
LSM2-213ENST00000491421 TIFAQ96CG3 184 aa9.55□□□□□ -0.88
LSM2-213ENST00000491421 LZTS2Q9BRK4 669 aa9.55□□□□□ -0.88
LSM2-213ENST00000491421 GRXCR1A8MXD5 290 aa9.54□□□□□ -0.88
LSM2-213ENST00000491421 PITPNM1O00562 1244 aa9.54□□□□□ -0.88
LSM2-213ENST00000491421 SORBS3O60504 671 aa9.54□□□□□ -0.88
LSM2-213ENST00000491421 CDC45O75419 566 aa9.54□□□□□ -0.88
LSM2-213ENST00000491421 GGPS1O95749 300 aa9.54□□□□□ -0.88
LSM2-213ENST00000491421 PFKMP08237 780 aa9.54□□□□□ -0.88
LSM2-213ENST00000491421 FOSL2P15408 326 aa9.54□□□□□ -0.88
LSM2-213ENST00000491421 RXRAP19793 462 aa9.54□□□□□ -0.88
LSM2-213ENST00000491421 SMARCA1P28370 1054 aa9.54□□□□□ -0.88
LSM2-213ENST00000491421 LIFRP42702 1097 aa9.54□□□□□ -0.88
LSM2-213ENST00000491421 BFSP2Q13515 415 aa9.54□□□□□ -0.88
LSM2-213ENST00000491421 COL9A3Q14050 684 aaPredicted RBP9.54□□□□□ -0.88
LSM2-213ENST00000491421 PTGISQ16647 500 aa9.54□□□□□ -0.88
LSM2-213ENST00000491421 GNPTABQ3T906 1256 aa9.54□□□□□ -0.88
LSM2-213ENST00000491421 C7orf31Q8N865 590 aa9.54□□□□□ -0.88
LSM2-213ENST00000491421 RETREG2Q8NC44 543 aa9.54□□□□□ -0.88
LSM2-213ENST00000491421 MYLIPQ8WY64 445 aa9.54□□□□□ -0.88
LSM2-213ENST00000491421 KAT2BQ92831 832 aa9.54□□□□□ -0.88
LSM2-213ENST00000491421 CUL5Q93034 780 aa9.54□□□□□ -0.88
LSM2-213ENST00000491421 SPATA33Q96N06 139 aa9.54□□□□□ -0.88
LSM2-213ENST00000491421 KATNAL1Q9BW62 490 aa9.54□□□□□ -0.88
LSM2-213ENST00000491421 LRRC2Q9BYS8 371 aa9.54□□□□□ -0.88
LSM2-213ENST00000491421 PBX4Q9BYU1 374 aa9.54□□□□□ -0.88
LSM2-213ENST00000491421 CXXC1Q9P0U4 656 aaPredicted RBP9.54□□□□□ -0.88
LSM2-213ENST00000491421 SLC12A7Q9Y666 1083 aa9.54□□□□□ -0.88
LSM2-213ENST00000491421 CDH23Q9H251 3354 aa9.54□□□□□ -0.88
LSM2-213ENST00000491421 ZBBXA8MT70 800 aa9.53□□□□□ -0.88
LSM2-213ENST00000491421 F2P00734 622 aa9.53□□□□□ -0.88
LSM2-213ENST00000491421 ZNF286BP0CG31 522 aa9.53□□□□□ -0.88
LSM2-213ENST00000491421 TGFB3P10600 412 aa9.53□□□□□ -0.88
LSM2-213ENST00000491421 UBA1P22314 1058 aaKnown RBP9.53□□□□□ -0.88
LSM2-213ENST00000491421 HOXD11P31277 338 aaPredicted RBP9.53□□□□□ -0.88
LSM2-213ENST00000491421 RFC2P35250 354 aa9.53□□□□□ -0.88
LSM2-213ENST00000491421 PBX2P40425 430 aa9.53□□□□□ -0.88
LSM2-213ENST00000491421 PSEN2P49810 448 aa9.53□□□□□ -0.88
LSM2-213ENST00000491421 MFSD10Q14728 455 aa9.53□□□□□ -0.88
LSM2-213ENST00000491421 RAB30Q15771 203 aa9.53□□□□□ -0.88
LSM2-213ENST00000491421 CELF3Q5SZQ8 465 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms