RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 MAP4K1Q92918 833 aa9.63□□□□□ -0.87
APP-216ENST00000491395 ZFP91Q96JP5 570 aaPredicted RBP9.63□□□□□ -0.87
APP-216ENST00000491395 MTIF3Q9H2K0 278 aaKnown RBP9.63□□□□□ -0.87
APP-216ENST00000491395 NKX2-4Q9H2Z4 354 aa9.63□□□□□ -0.87
APP-216ENST00000491395 PRDM12Q9H4Q4 367 aa9.63□□□□□ -0.87
APP-216ENST00000491395 RIOX1Q9H6W3 641 aa9.63□□□□□ -0.87
APP-216ENST00000491395 MRVI1Q9Y6F6 885 aa9.63□□□□□ -0.87
APP-216ENST00000491395 SLC4A7Q9Y6M7 1214 aa9.63□□□□□ -0.87
APP-216ENST00000491395 TTC28Q96AY4 2481 aa9.63□□□□□ -0.87
APP-216ENST00000491395 LRRC37A2A6NM11 1700 aa9.62□□□□□ -0.87
APP-216ENST00000491395 PNMA6FA0A0J9YX94 578 aa9.62□□□□□ -0.87
APP-216ENST00000491395 ERICH2A1L162 156 aa9.62□□□□□ -0.87
APP-216ENST00000491395 CYTH3O43739 400 aa9.62□□□□□ -0.87
APP-216ENST00000491395 SORBS3O60504 671 aa9.62□□□□□ -0.87
APP-216ENST00000491395 RGS20O76081 388 aa9.62□□□□□ -0.87
APP-216ENST00000491395 IQCF3P0C7M6 154 aa9.62□□□□□ -0.87
APP-216ENST00000491395 MYOGP15173 224 aa9.62□□□□□ -0.87
APP-216ENST00000491395 CASTP20810 708 aaKnown RBP9.62□□□□□ -0.87
APP-216ENST00000491395 LAMC2Q13753 1193 aa9.62□□□□□ -0.87
APP-216ENST00000491395 RAB30Q15771 203 aa9.62□□□□□ -0.87
APP-216ENST00000491395 PTGISQ16647 500 aa9.62□□□□□ -0.87
APP-216ENST00000491395 TMEM67Q5HYA8 995 aa9.62□□□□□ -0.87
APP-216ENST00000491395 VSIG10LQ86VR7 867 aa9.62□□□□□ -0.87
APP-216ENST00000491395 FCHSD1Q86WN1 690 aa9.62□□□□□ -0.87
APP-216ENST00000491395 MB21D2Q8IYB1 491 aaPredicted RBP9.62□□□□□ -0.87
APP-216ENST00000491395 RETREG2Q8NC44 543 aa9.62□□□□□ -0.87
APP-216ENST00000491395 IL31RAQ8NI17 732 aa9.62□□□□□ -0.87
APP-216ENST00000491395 IGDCC4Q8TDY8 1250 aa9.62□□□□□ -0.87
APP-216ENST00000491395 PDCD2LQ9BRP1 358 aa9.62□□□□□ -0.87
APP-216ENST00000491395 NOD1Q9Y239 953 aa9.62□□□□□ -0.87
APP-216ENST00000491395 RBM8AQ9Y5S9 174 aaKnown RBP9.62□□□□□ -0.87
APP-216ENST00000491395 GCOM1H8Y6P7 765 aaPredicted RBP9.61□□□□□ -0.87
APP-216ENST00000491395 RBAK-RBAKDNI3L0D1 243 aa9.61□□□□□ -0.87
APP-216ENST00000491395 PITPNM1O00562 1244 aa9.61□□□□□ -0.87
APP-216ENST00000491395 POLR2MP0CAP2 368 aa9.61□□□□□ -0.87
APP-216ENST00000491395 ATP2A2P16615 1042 aaKnown RBP9.61□□□□□ -0.87
APP-216ENST00000491395 PSEN2P49810 448 aa9.61□□□□□ -0.87
APP-216ENST00000491395 COL9A3Q14050 684 aaPredicted RBP9.61□□□□□ -0.87
APP-216ENST00000491395 ADGRE1Q14246 886 aa9.61□□□□□ -0.87
APP-216ENST00000491395 SART3Q15020 963 aaKnown RBP9.61□□□□□ -0.87
APP-216ENST00000491395 PGM5Q15124 567 aa9.61□□□□□ -0.87
APP-216ENST00000491395 DGKDQ16760 1214 aa9.61□□□□□ -0.87
APP-216ENST00000491395 GDF6Q6KF10 455 aaPredicted RBP9.61□□□□□ -0.87
APP-216ENST00000491395 CATIPQ7Z7H3 387 aa9.61□□□□□ -0.87
APP-216ENST00000491395 DHX37Q8IY37 1157 aaKnown RBP9.61□□□□□ -0.87
APP-216ENST00000491395 PPM1EQ8WY54 764 aa9.61□□□□□ -0.87
APP-216ENST00000491395 GPKOWQ92917 476 aaPredicted RBP eCLIP9.61□□□□□ -0.87
APP-216ENST00000491395 EMID1Q96A84 441 aaPredicted RBP9.61□□□□□ -0.87
APP-216ENST00000491395 CTAGE1Q96RT6 745 aa9.61□□□□□ -0.87
APP-216ENST00000491395 FTOQ9C0B1 505 aaKnown RBP eCLIP9.61□□□□□ -0.875e-6■□□□□ 9.9
APP-216ENST00000491395 SLC28A3Q9HAS3 691 aa9.61□□□□□ -0.87
APP-216ENST00000491395 PRDM6Q9NQX0 595 aa9.61□□□□□ -0.87
APP-216ENST00000491395 MAP3K20Q9NYL2 800 aaKnown RBP9.61□□□□□ -0.87
APP-216ENST00000491395 GGPS1O95749 300 aa9.6□□□□□ -0.87
APP-216ENST00000491395 PFKMP08237 780 aa9.6□□□□□ -0.87
APP-216ENST00000491395 ZNF286BP0CG31 522 aa9.6□□□□□ -0.87
APP-216ENST00000491395 RFC2P35250 354 aa9.6□□□□□ -0.87
APP-216ENST00000491395 ZNF200P98182 395 aaPredicted RBP9.6□□□□□ -0.87
APP-216ENST00000491395 SP2Q02086 613 aa9.6□□□□□ -0.87
APP-216ENST00000491395 TRAF1Q13077 416 aa9.6□□□□□ -0.87
APP-216ENST00000491395 BFSP2Q13515 415 aa9.6□□□□□ -0.87
APP-216ENST00000491395 GPNMBQ14956 572 aa9.6□□□□□ -0.87
APP-216ENST00000491395 CELF3Q5SZQ8 465 aaKnown RBP9.6□□□□□ -0.87
APP-216ENST00000491395 MYSM1Q5VVJ2 828 aa9.6□□□□□ -0.87
APP-216ENST00000491395 SESTD1Q86VW0 696 aa9.6□□□□□ -0.87
APP-216ENST00000491395 SAMD3Q8N6K7 520 aa9.6□□□□□ -0.87
APP-216ENST00000491395 C7orf31Q8N865 590 aa9.6□□□□□ -0.87
APP-216ENST00000491395 PPTC7Q8NI37 304 aa9.6□□□□□ -0.87
APP-216ENST00000491395 DHX38Q92620 1227 aaKnown RBP9.6□□□□□ -0.87
APP-216ENST00000491395 GAS2L1Q99501 681 aaPredicted RBP9.6□□□□□ -0.87
APP-216ENST00000491395 ALG1Q9BT22 464 aa9.6□□□□□ -0.87
APP-216ENST00000491395 MYL10Q9BUA6 226 aa9.6□□□□□ -0.87
APP-216ENST00000491395 LSG1Q9H089 658 aaKnown RBP9.6□□□□□ -0.87
APP-216ENST00000491395 BCAS3Q9H6U6 928 aa9.6□□□□□ -0.87
APP-216ENST00000491395 LY9Q9HBG7 655 aa9.6□□□□□ -0.87
APP-216ENST00000491395 HDAC6Q9UBN7 1215 aa9.6□□□□□ -0.87
APP-216ENST00000491395 PCDHA11Q9Y5I1 949 aa9.6□□□□□ -0.87
APP-216ENST00000491395 HAS3O00219 553 aa9.59□□□□□ -0.87
APP-216ENST00000491395 PRC1O43663 620 aa9.59□□□□□ -0.87
APP-216ENST00000491395 PPFIA4O75335 1185 aa9.59□□□□□ -0.87
APP-216ENST00000491395 ACTN1P12814 892 aa9.59□□□□□ -0.87
APP-216ENST00000491395 SELPP16109 830 aa9.59□□□□□ -0.87
APP-216ENST00000491395 UBA1P22314 1058 aaKnown RBP9.59□□□□□ -0.87
APP-216ENST00000491395 IGFBP4P22692 258 aa9.59□□□□□ -0.87
APP-216ENST00000491395 CCND2P30279 289 aa9.59□□□□□ -0.87
APP-216ENST00000491395 HIC1Q14526 733 aa9.59□□□□□ -0.87
APP-216ENST00000491395 MFSD10Q14728 455 aa9.59□□□□□ -0.87
APP-216ENST00000491395 CCDC85BQ15834 202 aaPredicted RBP9.59□□□□□ -0.87
APP-216ENST00000491395 KIAA0753Q2KHM9 967 aa9.59□□□□□ -0.87
APP-216ENST00000491395 HSDL1Q3SXM5 330 aa9.59□□□□□ -0.87
APP-216ENST00000491395 SKAP1Q86WV1 359 aa9.59□□□□□ -0.87
APP-216ENST00000491395 ZNF654Q8IZM8 581 aa9.59□□□□□ -0.87
APP-216ENST00000491395 SPATA33Q96N06 139 aa9.59□□□□□ -0.87
APP-216ENST00000491395 GTF2IRD1Q9UHL9 959 aa9.59□□□□□ -0.87
APP-216ENST00000491395 CHD9Q3L8U1 2897 aa9.58□□□□□ -0.88
APP-216ENST00000491395 SH2B2O14492 632 aaPredicted RBP9.58□□□□□ -0.88
APP-216ENST00000491395 SLC27A2O14975 620 aa9.58□□□□□ -0.88
APP-216ENST00000491395 PLEKHA8P1O95397 391 aa9.58□□□□□ -0.88
APP-216ENST00000491395 F2P00734 622 aa9.58□□□□□ -0.88
APP-216ENST00000491395 CA3P07451 260 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 170.3 ms