RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 TNFRSF25Q93038 417 aa25.69■■□□□ 1.7
USF3-203ENST00000491165 TUBE1Q9UJT0 475 aa25.69■■□□□ 1.7
USF3-203ENST00000491165 PCDHA4Q9UN74 947 aa25.69■■□□□ 1.7
USF3-203ENST00000491165 ESYT2A0FGR8 921 aa25.68■■□□□ 1.7
USF3-203ENST00000491165 ATP2A1O14983 1001 aa25.68■■□□□ 1.7
USF3-203ENST00000491165 PTPAQ15257 358 aa25.68■■□□□ 1.7
USF3-203ENST00000491165 USP17L6PQ6QN14 398 aa25.68■■□□□ 1.7
USF3-203ENST00000491165 KIF18AQ8NI77 898 aa25.68■■□□□ 1.7
USF3-203ENST00000491165 CLEC4DQ8WXI8 215 aa25.68■■□□□ 1.7
USF3-203ENST00000491165 SFPQP23246 707 aaKnown RBP eCLIP25.67■■□□□ 1.7
USF3-203ENST00000491165 PPP1R18Q6NYC8 613 aa25.67■■□□□ 1.7
USF3-203ENST00000491165 ARMCX5Q6P1M9 558 aa25.67■■□□□ 1.7
USF3-203ENST00000491165 SHC4Q6S5L8 630 aa25.67■■□□□ 1.7
USF3-203ENST00000491165 BLIDQ8IZY5 108 aa25.67■■□□□ 1.7
USF3-203ENST00000491165 SMCR8Q8TEV9 937 aaPredicted RBP25.67■■□□□ 1.7
USF3-203ENST00000491165 PNMA3Q9UL41 463 aa25.67■■□□□ 1.7
USF3-203ENST00000491165 CTDP1Q9Y5B0 961 aaPredicted RBP25.67■■□□□ 1.7
USF3-203ENST00000491165 RBBP6Q7Z6E9 1792 aaKnown RBP25.67■■□□□ 1.7
USF3-203ENST00000491165 FAM237AA0A1B0GTK4 181 aa25.67■■□□□ 1.7
USF3-203ENST00000491165 MEIS2O14770 477 aa25.67■■□□□ 1.7
USF3-203ENST00000491165 NRDCO43847 1150 aa25.67■■□□□ 1.7
USF3-203ENST00000491165 KRT2P35908 639 aa25.67■■□□□ 1.7
USF3-203ENST00000491165 CCDC12Q8WUD4 166 aaPredicted RBP25.67■■□□□ 1.7
USF3-203ENST00000491165 TEX13BQ9BXU2 312 aa25.67■■□□□ 1.7
USF3-203ENST00000491165 PSTPIP2Q9H939 334 aa25.67■■□□□ 1.7
USF3-203ENST00000491165 RIC8AQ9NPQ8 531 aa25.67■■□□□ 1.7
USF3-203ENST00000491165 TMEM260Q9NX78 707 aa25.67■■□□□ 1.7
USF3-203ENST00000491165 SPDYE4A6NLX3 237 aa25.66■■□□□ 1.7
USF3-203ENST00000491165 STAT3P40763 770 aa25.66■■□□□ 1.7
USF3-203ENST00000491165 KCNJ6P48051 423 aa25.66■■□□□ 1.7
USF3-203ENST00000491165 TM4SF4P48230 202 aa25.66■■□□□ 1.7
USF3-203ENST00000491165 OAZ1P54368 228 aa25.66■■□□□ 1.7
USF3-203ENST00000491165 NOGQ13253 232 aa25.66■■□□□ 1.7
USF3-203ENST00000491165 SPATC1LQ9H0A9 340 aa25.66■■□□□ 1.7
USF3-203ENST00000491165 BIN2Q9UBW5 565 aaPredicted RBP25.66■■□□□ 1.7
USF3-203ENST00000491165 PCDHA6Q9UN73 950 aa25.66■■□□□ 1.7
USF3-203ENST00000491165 PCDHA8Q9Y5H6 950 aa25.66■■□□□ 1.7
USF3-203ENST00000491165 ADCY7P51828 1080 aa25.66■■□□□ 1.7
USF3-203ENST00000491165 FANCCQ00597 558 aa25.66■■□□□ 1.7
USF3-203ENST00000491165 NAA30Q147X3 362 aaPredicted RBP25.66■■□□□ 1.7
USF3-203ENST00000491165 RESP18Q5W5W9 173 aa25.66■■□□□ 1.7
USF3-203ENST00000491165 MB21D1Q8N884 522 aa25.66■■□□□ 1.7
USF3-203ENST00000491165 DAGLBQ8NCG7 672 aa25.66■■□□□ 1.7
USF3-203ENST00000491165 HOXA13P31271 388 aaPredicted RBP25.65■■□□□ 1.7
USF3-203ENST00000491165 CLK2P49760 499 aaKnown RBP25.65■■□□□ 1.7
USF3-203ENST00000491165 VEGFBP49765 207 aa25.65■■□□□ 1.7
USF3-203ENST00000491165 ANKRD13CQ8N6S4 541 aa25.65■■□□□ 1.7
USF3-203ENST00000491165 TRERF1Q96PN7 1200 aa25.65■■□□□ 1.7
USF3-203ENST00000491165 FOXP1Q9H334 677 aaPredicted RBP25.65■■□□□ 1.7
USF3-203ENST00000491165 C6orf50Q9HD87 102 aa25.65■■□□□ 1.7
USF3-203ENST00000491165 ABCB11O95342 1321 aa25.65■■□□□ 1.7
USF3-203ENST00000491165 ZSCAN20P17040 1043 aaPredicted RBP25.64■■□□□ 1.7
USF3-203ENST00000491165 CALML3P27482 149 aa25.64■■□□□ 1.7
USF3-203ENST00000491165 INHBEP58166 350 aa25.64■■□□□ 1.7
USF3-203ENST00000491165 E4F1Q66K89 784 aaPredicted RBP25.64■■□□□ 1.7
USF3-203ENST00000491165 ISM2Q6H9L7 571 aa25.64■■□□□ 1.7
USF3-203ENST00000491165 CUL5Q93034 780 aa25.64■■□□□ 1.7
USF3-203ENST00000491165 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.64■■□□□ 1.7
USF3-203ENST00000491165 CUTAO60888 179 aa25.64■■□□□ 1.69
USF3-203ENST00000491165 GNA11P29992 359 aa25.64■■□□□ 1.69
USF3-203ENST00000491165 SREBF2Q12772 1141 aa25.64■■□□□ 1.69
USF3-203ENST00000491165 SAFBQ15424 915 aaKnown RBP eCLIP25.64■■□□□ 1.69
USF3-203ENST00000491165 NOSTRINQ8IVI9 506 aa25.64■■□□□ 1.69
USF3-203ENST00000491165 PARK7Q99497 189 aaKnown RBP25.64■■□□□ 1.69
USF3-203ENST00000491165 MOV10L1Q9BXT6 1211 aaKnown RBP25.64■■□□□ 1.69
USF3-203ENST00000491165 RNF146Q9NTX7 359 aa25.64■■□□□ 1.69
USF3-203ENST00000491165 ZNF215Q9UL58 517 aaPredicted RBP25.64■■□□□ 1.69
USF3-203ENST00000491165 RABGAP1Q9Y3P9 1069 aa25.64■■□□□ 1.69
USF3-203ENST00000491165 ADGRA2Q96PE1 1338 aa25.63■■□□□ 1.69
USF3-203ENST00000491165 LCTP09848 1927 aa25.63■■□□□ 1.69
USF3-203ENST00000491165 CFBP00751 764 aa25.63■■□□□ 1.69
USF3-203ENST00000491165 ERVK-9P63128 1117 aa25.63■■□□□ 1.69
USF3-203ENST00000491165 ERVK-24P63145 666 aa25.63■■□□□ 1.69
USF3-203ENST00000491165 JAKMIP3Q5VZ66 844 aa25.63■■□□□ 1.69
USF3-203ENST00000491165 PRDM4Q9UKN5 801 aa25.63■■□□□ 1.69
USF3-203ENST00000491165 MRPL11Q9Y3B7 192 aaKnown RBP25.63■■□□□ 1.69
USF3-203ENST00000491165 WNT7AO00755 349 aa25.63■■□□□ 1.69
USF3-203ENST00000491165 MYL5Q02045 173 aa25.63■■□□□ 1.69
USF3-203ENST00000491165 DMTNQ08495 405 aa25.63■■□□□ 1.69
USF3-203ENST00000491165 TAF1CQ15572 869 aaPredicted RBP25.63■■□□□ 1.69
USF3-203ENST00000491165 FAM177A1Q8N128 213 aaPredicted RBP25.63■■□□□ 1.69
USF3-203ENST00000491165 REXO1Q8N1G1 1221 aaKnown RBP25.63■■□□□ 1.69
USF3-203ENST00000491165 ERO1AQ96HE7 468 aa25.63■■□□□ 1.69
USF3-203ENST00000491165 PPP1R13BQ96KQ4 1090 aa25.63■■□□□ 1.69
USF3-203ENST00000491165 MYH7BA7E2Y1 1941 aa25.62■■□□□ 1.69
USF3-203ENST00000491165 PNOCQ13519 176 aa25.62■■□□□ 1.69
USF3-203ENST00000491165 UTP14CQ5TAP6 766 aaKnown RBP25.62■■□□□ 1.69
USF3-203ENST00000491165 GALNT17Q6IS24 598 aa25.62■■□□□ 1.69
USF3-203ENST00000491165 PIK3AP1Q6ZUJ8 805 aa25.62■■□□□ 1.69
USF3-203ENST00000491165 RIOX2Q8IUF8 465 aa25.62■■□□□ 1.69
USF3-203ENST00000491165 PORCNQ9H237 461 aa25.62■■□□□ 1.69
USF3-203ENST00000491165 HSD3B7Q9H2F3 369 aa25.62■■□□□ 1.69
USF3-203ENST00000491165 OGFRQ9NZT2 677 aa25.62■■□□□ 1.69
USF3-203ENST00000491165 HTTP42858 3142 aa25.62■■□□□ 1.69
USF3-203ENST00000491165 CBFA2T2O43439 604 aa25.61■■□□□ 1.69
USF3-203ENST00000491165 CLIC6Q96NY7 704 aa25.61■■□□□ 1.69
USF3-203ENST00000491165 COL20A1Q9P218 1284 aa25.61■■□□□ 1.69
USF3-203ENST00000491165 ATP1A3P13637 1013 aa25.61■■□□□ 1.69
USF3-203ENST00000491165 PURBQ96QR8 312 aaKnown RBP25.61■■□□□ 1.69
USF3-203ENST00000491165 BRMS1Q9HCU9 246 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms