RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 PLCB4Q15147 1175 aa21.42■■□□□ 1.02
SNAPC3-206ENST00000490969 CCDC40Q4G0X9 1142 aa21.42■■□□□ 1.02
SNAPC3-206ENST00000490969 FAM114A1Q8IWE2 563 aa21.42■■□□□ 1.02
SNAPC3-206ENST00000490969 ZSCAN29Q8IWY8 852 aaPredicted RBP21.42■■□□□ 1.02
SNAPC3-206ENST00000490969 CD302Q8IX05 232 aa21.42■■□□□ 1.02
SNAPC3-206ENST00000490969 BSDC1Q9NW68 430 aaPredicted RBP21.42■■□□□ 1.02
SNAPC3-206ENST00000490969 ADAMTS3O15072 1205 aa21.41■■□□□ 1.02
SNAPC3-206ENST00000490969 CLSTN1O94985 981 aa21.41■■□□□ 1.02
SNAPC3-206ENST00000490969 RXRBP28702 533 aa21.41■■□□□ 1.02
SNAPC3-206ENST00000490969 HDLBPQ00341 1268 aaKnown RBP21.41■■□□□ 1.02
SNAPC3-206ENST00000490969 PAK2Q13177 524 aa21.41■■□□□ 1.02
SNAPC3-206ENST00000490969 GIMAP7Q8NHV1 300 aa21.41■■□□□ 1.02
SNAPC3-206ENST00000490969 PIK3R5Q8WYR1 880 aa21.41■■□□□ 1.02
SNAPC3-206ENST00000490969 TLR10Q9BXR5 811 aa21.41■■□□□ 1.02
SNAPC3-206ENST00000490969 GGA2Q9UJY4 613 aa21.41■■□□□ 1.02
SNAPC3-206ENST00000490969 LCA5LO95447 670 aa21.4■■□□□ 1.02
SNAPC3-206ENST00000490969 MYL1P05976 194 aa21.4■■□□□ 1.02
SNAPC3-206ENST00000490969 CALM1P0DP23 149 aa21.4■■□□□ 1.02
SNAPC3-206ENST00000490969 CALM2P0DP24 149 aa21.4■■□□□ 1.02
SNAPC3-206ENST00000490969 CALM3P0DP25 149 aa21.4■■□□□ 1.02
SNAPC3-206ENST00000490969 EIF4A3P38919 411 aaKnown RBP21.4■■□□□ 1.02
SNAPC3-206ENST00000490969 MDH1P40925 334 aaKnown RBP21.4■■□□□ 1.02
SNAPC3-206ENST00000490969 CCDC13Q8IYE1 715 aa21.4■■□□□ 1.02
SNAPC3-206ENST00000490969 MREGQ8N565 214 aa21.4■■□□□ 1.02
SNAPC3-206ENST00000490969 P2RX5Q93086 422 aa21.4■■□□□ 1.02
SNAPC3-206ENST00000490969 ANAPC4Q9UJX5 808 aa21.4■■□□□ 1.02
SNAPC3-206ENST00000490969 ARAP2Q8WZ64 1704 aa21.4■■□□□ 1.02
SNAPC3-206ENST00000490969 BAZ2BQ9UIF8 2168 aaKnown RBP21.4■■□□□ 1.02
SNAPC3-206ENST00000490969 A0A1B0GUL6 1792 aa21.4■■□□□ 1.02
SNAPC3-206ENST00000490969 C21orf2O43822 256 aa21.4■■□□□ 1.02
SNAPC3-206ENST00000490969 CCNE1P24864 410 aa21.4■■□□□ 1.02
SNAPC3-206ENST00000490969 RPS8P62241 208 aaKnown RBP21.4■■□□□ 1.02
SNAPC3-206ENST00000490969 NEDD9Q14511 834 aa21.4■■□□□ 1.02
SNAPC3-206ENST00000490969 ANKRD40Q6AI12 368 aa21.4■■□□□ 1.02
SNAPC3-206ENST00000490969 PRR5LQ6MZQ0 368 aa21.4■■□□□ 1.02
SNAPC3-206ENST00000490969 CCDC155Q8N6L0 562 aa21.4■■□□□ 1.02
SNAPC3-206ENST00000490969 SDR42E1Q8WUS8 393 aa21.4■■□□□ 1.02
SNAPC3-206ENST00000490969 IFT81Q8WYA0 676 aa21.4■■□□□ 1.02
SNAPC3-206ENST00000490969 ATP6V1G3Q96LB4 118 aa21.4■■□□□ 1.02
SNAPC3-206ENST00000490969 ESYT3A0FGR9 886 aa21.39■■□□□ 1.02
SNAPC3-206ENST00000490969 BICDL2A1A5D9 508 aa21.39■■□□□ 1.02
SNAPC3-206ENST00000490969 PP2D1A8MPX8 630 aa21.39■■□□□ 1.02
SNAPC3-206ENST00000490969 RASSF9O75901 435 aa21.39■■□□□ 1.02
SNAPC3-206ENST00000490969 FAM107AO95990 144 aa21.39■■□□□ 1.02
SNAPC3-206ENST00000490969 IFT88Q13099 833 aa21.39■■□□□ 1.02
SNAPC3-206ENST00000490969 SEMA3FQ13275 785 aa21.39■■□□□ 1.02
SNAPC3-206ENST00000490969 SRBD1Q8N5C6 995 aaKnown RBP21.39■■□□□ 1.02
SNAPC3-206ENST00000490969 IQCDQ96DY2 449 aa21.39■■□□□ 1.02
SNAPC3-206ENST00000490969 EPB41L5Q9HCM4 733 aa21.39■■□□□ 1.02
SNAPC3-206ENST00000490969 KBTBD4Q9NVX7 518 aa21.39■■□□□ 1.02
SNAPC3-206ENST00000490969 SALL4Q9UJQ4 1053 aa21.39■■□□□ 1.02
SNAPC3-206ENST00000490969 ZSCAN5CA6NGD5 496 aaPredicted RBP21.39■■□□□ 1.01
SNAPC3-206ENST00000490969 AKR1B10O60218 316 aa21.39■■□□□ 1.01
SNAPC3-206ENST00000490969 HEXIM1O94992 359 aaKnown RBP21.39■■□□□ 1.01
SNAPC3-206ENST00000490969 SCG2P13521 617 aa21.39■■□□□ 1.01
SNAPC3-206ENST00000490969 GUCY2DQ02846 1103 aa21.39■■□□□ 1.01
SNAPC3-206ENST00000490969 CFAP221Q4G0U5 840 aa21.39■■□□□ 1.01
SNAPC3-206ENST00000490969 PREPLQ4J6C6 727 aaPredicted RBP21.39■■□□□ 1.01
SNAPC3-206ENST00000490969 MS4A14Q96JA4 679 aa21.39■■□□□ 1.01
SNAPC3-206ENST00000490969 MCM8Q9UJA3 840 aa21.39■■□□□ 1.01
SNAPC3-206ENST00000490969 C1orf131Q8NDD1 294 aaKnown RBP21.38■■□□□ 1.01
SNAPC3-206ENST00000490969 PLIN2Q99541 437 aa21.38■■□□□ 1.01
SNAPC3-206ENST00000490969 NKRFO15226 690 aaKnown RBP eCLIP21.38■■□□□ 1.01
SNAPC3-206ENST00000490969 DDAH1O94760 285 aa21.38■■□□□ 1.01
SNAPC3-206ENST00000490969 ADRA2BP18089 450 aa21.38■■□□□ 1.01
SNAPC3-206ENST00000490969 GUCY2FP51841 1108 aa21.38■■□□□ 1.01
SNAPC3-206ENST00000490969 ANKRD13CQ8N6S4 541 aa21.38■■□□□ 1.01
SNAPC3-206ENST00000490969 CNBD1Q8NA66 436 aa21.38■■□□□ 1.01
SNAPC3-206ENST00000490969 SRRM3A6NNA2 597 aaPredicted RBP21.37■■□□□ 1.01
SNAPC3-206ENST00000490969 HMGB1P1B2RPK0 211 aaPredicted RBP21.37■■□□□ 1.01
SNAPC3-206ENST00000490969 E7EVH7 732 aa21.37■■□□□ 1.01
SNAPC3-206ENST00000490969 MAGEA1P43355 309 aa21.37■■□□□ 1.01
SNAPC3-206ENST00000490969 ITGB3BPQ13352 177 aaPredicted RBP21.37■■□□□ 1.01
SNAPC3-206ENST00000490969 DRP2Q13474 957 aa21.37■■□□□ 1.01
SNAPC3-206ENST00000490969 KLHDC7AQ5VTJ3 777 aa21.37■■□□□ 1.01
SNAPC3-206ENST00000490969 C6orf89Q6UWU4 347 aa21.37■■□□□ 1.01
SNAPC3-206ENST00000490969 DTHD1Q6ZMT9 781 aa21.37■■□□□ 1.01
SNAPC3-206ENST00000490969 IQCA1Q86XH1 822 aa21.37■■□□□ 1.01
SNAPC3-206ENST00000490969 SLC40A1Q9NP59 571 aa21.37■■□□□ 1.01
SNAPC3-206ENST00000490969 EPHB6O15197 1021 aa21.37■■□□□ 1.01
SNAPC3-206ENST00000490969 PJA2O43164 708 aa21.37■■□□□ 1.01
SNAPC3-206ENST00000490969 VEGFAP15692 232 aaPredicted RBP21.37■■□□□ 1.01
SNAPC3-206ENST00000490969 MTMR8Q96EF0 704 aa21.37■■□□□ 1.01
SNAPC3-206ENST00000490969 UBA7P41226 1012 aa21.36■■□□□ 1.01
SNAPC3-206ENST00000490969 NOX5Q96PH1 765 aa21.36■■□□□ 1.01
SNAPC3-206ENST00000490969 FAM207AQ9NSI2 230 aaPredicted RBP21.36■■□□□ 1.01
SNAPC3-206ENST00000490969 LRP2BPQ9P2M1 347 aa21.36■■□□□ 1.01
SNAPC3-206ENST00000490969 RNF14Q9UBS8 474 aa21.36■■□□□ 1.01
SNAPC3-206ENST00000490969 TSKSQ9UJT2 592 aa21.36■■□□□ 1.01
SNAPC3-206ENST00000490969 DUOX1Q9NRD9 1551 aa21.36■■□□□ 1.01
SNAPC3-206ENST00000490969 SERPINB2P05120 415 aa21.36■■□□□ 1.01
SNAPC3-206ENST00000490969 CEP85LQ5SZL2 805 aa21.36■■□□□ 1.01
SNAPC3-206ENST00000490969 TXNRD3Q86VQ6 643 aa21.36■■□□□ 1.01
SNAPC3-206ENST00000490969 BANK1Q8NDB2 785 aa21.36■■□□□ 1.01
SNAPC3-206ENST00000490969 TFCP2L1Q9NZI6 479 aa21.36■■□□□ 1.01
SNAPC3-206ENST00000490969 ELF1P32519 619 aa21.35■■□□□ 1.01
SNAPC3-206ENST00000490969 PFKFB3Q16875 520 aaPredicted RBP21.35■■□□□ 1.01
SNAPC3-206ENST00000490969 PPP4R3AQ6IN85 833 aa21.35■■□□□ 1.01
SNAPC3-206ENST00000490969 ADGRA1Q86SQ6 560 aa21.35■■□□□ 1.01
SNAPC3-206ENST00000490969 COL23A1Q86Y22 540 aaPredicted RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms