RNA–Protein interactions for RNA: ENST00000490471.1

CDCP1-203, Transcript of CUB domain containing protein 1, humanhuman

TSL 4

Gene CDCP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-203ENST00000490471 TAAR1Q96RJ0 339 aa13.16□□□□□ -0.3
CDCP1-203ENST00000490471 MTA3Q9BTC8 594 aa13.16□□□□□ -0.3
CDCP1-203ENST00000490471 FTOQ9C0B1 505 aaKnown RBP eCLIP13.16□□□□□ -0.3
CDCP1-203ENST00000490471 TRPV6Q9H1D0 765 aa13.16□□□□□ -0.3
CDCP1-203ENST00000490471 JMJD4Q9H9V9 463 aa13.16□□□□□ -0.3
CDCP1-203ENST00000490471 PCDHA1Q9Y5I3 950 aa13.16□□□□□ -0.3
CDCP1-203ENST00000490471 MRVI1Q9Y6F6 885 aa13.16□□□□□ -0.3
CDCP1-203ENST00000490471 MYH6P13533 1939 aa13.15□□□□□ -0.3
CDCP1-203ENST00000490471 STAM2O75886 525 aa13.15□□□□□ -0.3
CDCP1-203ENST00000490471 NR3C2P08235 984 aa13.15□□□□□ -0.3
CDCP1-203ENST00000490471 CCND2P30279 289 aa13.15□□□□□ -0.3
CDCP1-203ENST00000490471 CHMP4BP1P59074 171 aa13.15□□□□□ -0.3
CDCP1-203ENST00000490471 GNPTABQ3T906 1256 aa13.15□□□□□ -0.3
CDCP1-203ENST00000490471 RASIP1Q5U651 963 aa13.15□□□□□ -0.3
CDCP1-203ENST00000490471 OTOP2Q7RTS6 562 aa13.15□□□□□ -0.3
CDCP1-203ENST00000490471 IL27Q8NEV9 243 aa13.15□□□□□ -0.3
CDCP1-203ENST00000490471 CTCFLQ8NI51 663 aaPredicted RBP13.15□□□□□ -0.3
CDCP1-203ENST00000490471 PHOSPHO2Q8TCD6 241 aa13.15□□□□□ -0.3
CDCP1-203ENST00000490471 LZTS2Q9BRK4 669 aa13.15□□□□□ -0.3
CDCP1-203ENST00000490471 TTYH1Q9H313 450 aaPredicted RBP13.15□□□□□ -0.3
CDCP1-203ENST00000490471 TRPC6Q9Y210 931 aa13.15□□□□□ -0.3
CDCP1-203ENST00000490471 LRRC37A2A6NM11 1700 aa13.14□□□□□ -0.31
CDCP1-203ENST00000490471 PNMA6FA0A0J9YX94 578 aa13.14□□□□□ -0.31
CDCP1-203ENST00000490471 CALM1P0DP23 149 aa13.14□□□□□ -0.31
CDCP1-203ENST00000490471 CALM2P0DP24 149 aa13.14□□□□□ -0.31
CDCP1-203ENST00000490471 CALM3P0DP25 149 aa13.14□□□□□ -0.31
CDCP1-203ENST00000490471 MYCLP12524 364 aaPredicted RBP13.14□□□□□ -0.31
CDCP1-203ENST00000490471 CHMLP26374 656 aa13.14□□□□□ -0.31
CDCP1-203ENST00000490471 PTGISQ16647 500 aa13.14□□□□□ -0.31
CDCP1-203ENST00000490471 TMEM67Q5HYA8 995 aa13.14□□□□□ -0.31
CDCP1-203ENST00000490471 SYNE3Q6ZMZ3 975 aa13.14□□□□□ -0.31
CDCP1-203ENST00000490471 AFAP1L1Q8TED9 768 aa13.14□□□□□ -0.31
CDCP1-203ENST00000490471 SLC9A7Q96T83 725 aa13.14□□□□□ -0.31
CDCP1-203ENST00000490471 MAP3K14Q99558 947 aa13.14□□□□□ -0.31
CDCP1-203ENST00000490471 PBX4Q9BYU1 374 aa13.14□□□□□ -0.31
CDCP1-203ENST00000490471 PXMP2Q9NR77 195 aa13.14□□□□□ -0.31
CDCP1-203ENST00000490471 SEC63Q9UGP8 760 aaKnown RBP13.14□□□□□ -0.31
CDCP1-203ENST00000490471 PCDHB13Q9Y5F0 798 aa13.14□□□□□ -0.31
CDCP1-203ENST00000490471 PCDHA11Q9Y5I1 949 aa13.14□□□□□ -0.31
CDCP1-203ENST00000490471 GRIN2DO15399 1336 aa13.13□□□□□ -0.31
CDCP1-203ENST00000490471 PALM3A6NDB9 673 aaPredicted RBP13.13□□□□□ -0.31
CDCP1-203ENST00000490471 EFCAB14O75071 495 aa13.13□□□□□ -0.31
CDCP1-203ENST00000490471 PPFIA4O75335 1185 aa13.13□□□□□ -0.31
CDCP1-203ENST00000490471 BAIAP3O94812 1187 aa13.13□□□□□ -0.31
CDCP1-203ENST00000490471 MMP3P08254 477 aa13.13□□□□□ -0.31
CDCP1-203ENST00000490471 ATP2A2P16615 1042 aaKnown RBP13.13□□□□□ -0.31
CDCP1-203ENST00000490471 EIF2AK2P19525 551 aaKnown RBP13.13□□□□□ -0.31
CDCP1-203ENST00000490471 SMARCA1P28370 1054 aa13.13□□□□□ -0.31
CDCP1-203ENST00000490471 KCNJ6P48051 423 aa13.13□□□□□ -0.31
CDCP1-203ENST00000490471 HSD17B4P51659 736 aa13.13□□□□□ -0.31
CDCP1-203ENST00000490471 GRM4Q14833 912 aa13.13□□□□□ -0.31
CDCP1-203ENST00000490471 SEC23AQ15436 765 aa13.13□□□□□ -0.31
CDCP1-203ENST00000490471 RNF20Q5VTR2 975 aa13.13□□□□□ -0.31
CDCP1-203ENST00000490471 CCDC62Q6P9F0 684 aa13.13□□□□□ -0.31
CDCP1-203ENST00000490471 NFXL1Q6ZNB6 911 aa13.13□□□□□ -0.31
CDCP1-203ENST00000490471 C16orf59Q7L2K0 433 aa13.13□□□□□ -0.31
CDCP1-203ENST00000490471 CHST3Q7LGC8 479 aa13.13□□□□□ -0.31
CDCP1-203ENST00000490471 SESTD1Q86VW0 696 aa13.13□□□□□ -0.31
CDCP1-203ENST00000490471 HOMER1Q86YM7 354 aa13.13□□□□□ -0.31
CDCP1-203ENST00000490471 AFG1LQ8WV93 481 aa13.13□□□□□ -0.31
CDCP1-203ENST00000490471 EMID1Q96A84 441 aaPredicted RBP13.13□□□□□ -0.31
CDCP1-203ENST00000490471 RRP36Q96EU6 259 aaKnown RBP13.13□□□□□ -0.31
CDCP1-203ENST00000490471 MLXIPQ9HAP2 919 aa13.13□□□□□ -0.31
CDCP1-203ENST00000490471 TRMT13Q9NUP7 481 aaKnown RBP13.13□□□□□ -0.31
CDCP1-203ENST00000490471 CCDC69A6NI79 296 aa13.12□□□□□ -0.31
CDCP1-203ENST00000490471 E7EWF7 191 aa13.12□□□□□ -0.31
CDCP1-203ENST00000490471 GTPBP6O43824 516 aaPredicted RBP13.12□□□□□ -0.31
CDCP1-203ENST00000490471 CYP21A2P08686 494 aa13.12□□□□□ -0.31
CDCP1-203ENST00000490471 IQCF3P0C7M6 154 aa13.12□□□□□ -0.31
CDCP1-203ENST00000490471 GNAT1P11488 350 aa13.12□□□□□ -0.31
CDCP1-203ENST00000490471 CYP2C9P11712 490 aa13.12□□□□□ -0.31
CDCP1-203ENST00000490471 GHRHRQ02643 423 aa13.12□□□□□ -0.31
CDCP1-203ENST00000490471 GRIN2CQ14957 1233 aa13.12□□□□□ -0.31
CDCP1-203ENST00000490471 LY6KQ17RY6 165 aa13.12□□□□□ -0.31
CDCP1-203ENST00000490471 PPP2R2DQ66LE6 453 aa13.12□□□□□ -0.31
CDCP1-203ENST00000490471 STOX1Q6ZVD7 989 aa13.12□□□□□ -0.31
CDCP1-203ENST00000490471 DEFB128Q7Z7B8 93 aa13.12□□□□□ -0.31
CDCP1-203ENST00000490471 GIMAP8Q8ND71 665 aaPredicted RBP13.12□□□□□ -0.31
CDCP1-203ENST00000490471 PPTC7Q8NI37 304 aa13.12□□□□□ -0.31
CDCP1-203ENST00000490471 SMARCC2Q8TAQ2 1214 aa13.12□□□□□ -0.31
CDCP1-203ENST00000490471 TMEM87BQ96K49 555 aa13.12□□□□□ -0.31
CDCP1-203ENST00000490471 CPVLQ9H3G5 476 aa13.12□□□□□ -0.31
CDCP1-203ENST00000490471 RIOX1Q9H6W3 641 aa13.12□□□□□ -0.31
CDCP1-203ENST00000490471 MAD2L2Q9UI95 211 aa13.12□□□□□ -0.31
CDCP1-203ENST00000490471 DDX41Q9UJV9 622 aaKnown RBP13.12□□□□□ -0.31
CDCP1-203ENST00000490471 NOP56O00567 594 aaKnown RBP13.11□□□□□ -0.31
CDCP1-203ENST00000490471 SGSM2O43147 1006 aa13.11□□□□□ -0.31
CDCP1-203ENST00000490471 DDAH1O94760 285 aa13.11□□□□□ -0.31
CDCP1-203ENST00000490471 IGFBP4P22692 258 aa13.11□□□□□ -0.31
CDCP1-203ENST00000490471 MCM5P33992 734 aa13.11□□□□□ -0.31
CDCP1-203ENST00000490471 NEDD9Q14511 834 aa13.11□□□□□ -0.31
CDCP1-203ENST00000490471 XRRA1Q6P2D8 792 aa13.11□□□□□ -0.31
CDCP1-203ENST00000490471 NLRX1Q86UT6 975 aa13.11□□□□□ -0.31
CDCP1-203ENST00000490471 STAG2Q8N3U4 1231 aa13.11□□□□□ -0.31
CDCP1-203ENST00000490471 TBC1D5Q92609 795 aa13.11□□□□□ -0.31
CDCP1-203ENST00000490471 COPS5Q92905 334 aa13.11□□□□□ -0.31
CDCP1-203ENST00000490471 MAP4K1Q92918 833 aa13.11□□□□□ -0.31
CDCP1-203ENST00000490471 MTMR8Q96EF0 704 aa13.11□□□□□ -0.31
CDCP1-203ENST00000490471 SCLYQ96I15 445 aa13.11□□□□□ -0.31
CDCP1-203ENST00000490471 PDCD2LQ9BRP1 358 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms