RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-215	ENST00000490140	EMID1	Q96A84	441 aa	Predicted RBP	13.74	□□□□□ -0.21
FDPS-215	ENST00000490140	KRT23	Q9C075	422 aa		13.74	□□□□□ -0.21
FDPS-215	ENST00000490140	MAP3K20	Q9NYL2	800 aa	Known RBP	13.74	□□□□□ -0.21
FDPS-215	ENST00000490140	MTCH2	Q9Y6C9	303 aa		13.74	□□□□□ -0.21
FDPS-215	ENST00000490140	MRVI1	Q9Y6F6	885 aa		13.74	□□□□□ -0.21
FDPS-215	ENST00000490140	EMSY	Q7Z589	1322 aa		13.73	□□□□□ -0.21
FDPS-215	ENST00000490140	KDM4A	O75164	1064 aa		13.73	□□□□□ -0.21
FDPS-215	ENST00000490140	EIF3J	O75822	258 aa	Known RBP	13.73	□□□□□ -0.21
FDPS-215	ENST00000490140	GOLGA8H	P0CJ92	632 aa		13.73	□□□□□ -0.21
FDPS-215	ENST00000490140	LAMC2	Q13753	1193 aa		13.73	□□□□□ -0.21
FDPS-215	ENST00000490140	CCDC62	Q6P9F0	684 aa		13.73	□□□□□ -0.21
FDPS-215	ENST00000490140	ADGRF4	Q8IZF3	695 aa		13.73	□□□□□ -0.21
FDPS-215	ENST00000490140	SAMD3	Q8N6K7	520 aa		13.73	□□□□□ -0.21
FDPS-215	ENST00000490140	PPTC7	Q8NI37	304 aa		13.73	□□□□□ -0.21
FDPS-215	ENST00000490140	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.73	□□□□□ -0.21
FDPS-215	ENST00000490140	VWCE	Q96DN2	955 aa		13.73	□□□□□ -0.21
FDPS-215	ENST00000490140	CRBN	Q96SW2	442 aa		13.73	□□□□□ -0.21
FDPS-215	ENST00000490140	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.73	□□□□□ -0.21
FDPS-215	ENST00000490140	ZKSCAN3	Q9BRR0	538 aa		13.73	□□□□□ -0.21
FDPS-215	ENST00000490140	LNPK	Q9C0E8	428 aa		13.73	□□□□□ -0.21
FDPS-215	ENST00000490140	RWDD1	Q9H446	243 aa	Predicted RBP	13.73	□□□□□ -0.21
FDPS-215	ENST00000490140	LMCD1	Q9NZU5	365 aa		13.73	□□□□□ -0.21
FDPS-215	ENST00000490140	GTF2IRD1	Q9UHL9	959 aa		13.73	□□□□□ -0.21
FDPS-215	ENST00000490140	REV3L	O60673	3130 aa		13.72	□□□□□ -0.21
FDPS-215	ENST00000490140	ABHD14A-ACY1	A0A1B0GW23	586 aa		13.72	□□□□□ -0.21
FDPS-215	ENST00000490140	ARIH2	O95376	493 aa		13.72	□□□□□ -0.21
FDPS-215	ENST00000490140	SDS	P20132	328 aa		13.72	□□□□□ -0.21
FDPS-215	ENST00000490140	WDR5	P61964	334 aa	Known RBP	13.72	□□□□□ -0.21
FDPS-215	ENST00000490140	TAP1	Q03518	808 aa		13.72	□□□□□ -0.21
FDPS-215	ENST00000490140	ARHGAP1	Q07960	439 aa		13.72	□□□□□ -0.21
FDPS-215	ENST00000490140	QRICH1	Q2TAL8	776 aa		13.72	□□□□□ -0.21
FDPS-215	ENST00000490140	CHST3	Q7LGC8	479 aa		13.72	□□□□□ -0.21
FDPS-215	ENST00000490140	ANKS1A	Q92625	1134 aa		13.72	□□□□□ -0.21
FDPS-215	ENST00000490140	HLA-C	Q95604	372 aa		13.72	□□□□□ -0.21
FDPS-215	ENST00000490140	DSCC1	Q9BVC3	393 aa		13.72	□□□□□ -0.21
FDPS-215	ENST00000490140	AMN	Q9BXJ7	453 aa		13.72	□□□□□ -0.21
FDPS-215	ENST00000490140	UBA5	Q9GZZ9	404 aa		13.72	□□□□□ -0.21
FDPS-215	ENST00000490140	TRIP12	Q14669	1992 aa	Predicted RBP	13.72	□□□□□ -0.21
FDPS-215	ENST00000490140	F2	P00734	622 aa		13.71	□□□□□ -0.21
FDPS-215	ENST00000490140	BMP1	P13497	986 aa		13.71	□□□□□ -0.21
FDPS-215	ENST00000490140	PTK7	Q13308	1070 aa		13.71	□□□□□ -0.21
FDPS-215	ENST00000490140	IKBKE	Q14164	716 aa		13.71	□□□□□ -0.21
FDPS-215	ENST00000490140	LY6K	Q17RY6	165 aa		13.71	□□□□□ -0.21
FDPS-215	ENST00000490140	IFIT1B	Q5T764	474 aa	Known RBP	13.71	□□□□□ -0.21
FDPS-215	ENST00000490140	DHX37	Q8IY37	1157 aa	Known RBP	13.71	□□□□□ -0.21
FDPS-215	ENST00000490140	ENAH	Q8N8S7	591 aa	Predicted RBP	13.71	□□□□□ -0.21
FDPS-215	ENST00000490140	CERS4	Q9HA82	394 aa		13.71	□□□□□ -0.21
FDPS-215	ENST00000490140	PXMP2	Q9NR77	195 aa		13.71	□□□□□ -0.21
FDPS-215	ENST00000490140	TET1	Q8NFU7	2136 aa		13.7	□□□□□ -0.22
FDPS-215	ENST00000490140	CFB	P00751	764 aa		13.7	□□□□□ -0.22
FDPS-215	ENST00000490140	CXCL10	P02778	98 aa		13.7	□□□□□ -0.22
FDPS-215	ENST00000490140	EIF2AK2	P19525	551 aa	Known RBP	13.7	□□□□□ -0.22
FDPS-215	ENST00000490140	PSEN2	P49810	448 aa		13.7	□□□□□ -0.22
FDPS-215	ENST00000490140	TFF2	Q03403	129 aa		13.7	□□□□□ -0.22
FDPS-215	ENST00000490140	TRDN	Q13061	729 aa		13.7	□□□□□ -0.22
FDPS-215	ENST00000490140	MFSD10	Q14728	455 aa		13.7	□□□□□ -0.22
FDPS-215	ENST00000490140	GDF6	Q6KF10	455 aa	Predicted RBP	13.7	□□□□□ -0.22
FDPS-215	ENST00000490140	CWC27	Q6UX04	472 aa	Known RBP	13.7	□□□□□ -0.22
FDPS-215	ENST00000490140	CHD1L	Q86WJ1	897 aa		13.7	□□□□□ -0.22
FDPS-215	ENST00000490140	TAAR1	Q96RJ0	339 aa		13.7	□□□□□ -0.22
FDPS-215	ENST00000490140	RAD9A	Q99638	391 aa		13.7	□□□□□ -0.22
FDPS-215	ENST00000490140	OSBPL3	Q9H4L5	887 aa		13.7	□□□□□ -0.22
FDPS-215	ENST00000490140	DDX41	Q9UJV9	622 aa	Known RBP	13.7	□□□□□ -0.22
FDPS-215	ENST00000490140	COL4A4	P53420	1690 aa	Predicted RBP	13.69	□□□□□ -0.22
FDPS-215	ENST00000490140		B4E1Z4	1266 aa		13.69	□□□□□ -0.22
FDPS-215	ENST00000490140	PPFIA4	O75335	1185 aa		13.69	□□□□□ -0.22
FDPS-215	ENST00000490140	GJB5	O95377	273 aa		13.69	□□□□□ -0.22
FDPS-215	ENST00000490140	NR3C2	P08235	984 aa		13.69	□□□□□ -0.22
FDPS-215	ENST00000490140	TGFB3	P10600	412 aa		13.69	□□□□□ -0.22
FDPS-215	ENST00000490140	CKB	P12277	381 aa		13.69	□□□□□ -0.22
FDPS-215	ENST00000490140	HSD17B4	P51659	736 aa		13.69	□□□□□ -0.22
FDPS-215	ENST00000490140	GHRHR	Q02643	423 aa		13.69	□□□□□ -0.22
FDPS-215	ENST00000490140	GRB10	Q13322	594 aa		13.69	□□□□□ -0.22
FDPS-215	ENST00000490140	KIAA0753	Q2KHM9	967 aa		13.69	□□□□□ -0.22
FDPS-215	ENST00000490140	SMC5	Q8IY18	1101 aa		13.69	□□□□□ -0.22
FDPS-215	ENST00000490140	KAT2B	Q92831	832 aa		13.69	□□□□□ -0.22
FDPS-215	ENST00000490140	TGS1	Q96RS0	853 aa	Known RBP	13.69	□□□□□ -0.22
FDPS-215	ENST00000490140	CPVL	Q9H3G5	476 aa		13.69	□□□□□ -0.22
FDPS-215	ENST00000490140	HCN4	Q9Y3Q4	1203 aa		13.69	□□□□□ -0.22
FDPS-215	ENST00000490140	TCF20	Q9UGU0	1960 aa	Known RBP	13.69	□□□□□ -0.22
FDPS-215	ENST00000490140	ERICH2	A1L162	156 aa		13.68	□□□□□ -0.22
FDPS-215	ENST00000490140	ZBTB5	O15062	677 aa		13.68	□□□□□ -0.22
FDPS-215	ENST00000490140	AMH	P03971	560 aa		13.68	□□□□□ -0.22
FDPS-215	ENST00000490140	CCND2	P30279	289 aa		13.68	□□□□□ -0.22
FDPS-215	ENST00000490140	KCNQ1	P51787	676 aa		13.68	□□□□□ -0.22
FDPS-215	ENST00000490140	SART3	Q15020	963 aa	Known RBP	13.68	□□□□□ -0.22
FDPS-215	ENST00000490140	GNPTAB	Q3T906	1256 aa		13.68	□□□□□ -0.22
FDPS-215	ENST00000490140	SPATA33	Q96N06	139 aa		13.68	□□□□□ -0.22
FDPS-215	ENST00000490140	ALG1	Q9BT22	464 aa		13.68	□□□□□ -0.22
FDPS-215	ENST00000490140	JMJD4	Q9H9V9	463 aa		13.68	□□□□□ -0.22
FDPS-215	ENST00000490140	VAT1L	Q9HCJ6	419 aa		13.68	□□□□□ -0.22
FDPS-215	ENST00000490140	COL20A1	Q9P218	1284 aa		13.68	□□□□□ -0.22
FDPS-215	ENST00000490140	HDAC6	Q9UBN7	1215 aa		13.68	□□□□□ -0.22
FDPS-215	ENST00000490140	BRWD1	Q9NSI6	2320 aa		13.68	□□□□□ -0.22
FDPS-215	ENST00000490140	KLRF2	D3W0D1	207 aa		13.67	□□□□□ -0.22
FDPS-215	ENST00000490140	RFXAP	O00287	272 aa		13.67	□□□□□ -0.22
FDPS-215	ENST00000490140	NOP56	O00567	594 aa	Known RBP	13.67	□□□□□ -0.22
FDPS-215	ENST00000490140	CAND2	O75155	1236 aa		13.67	□□□□□ -0.22
FDPS-215	ENST00000490140	STAM2	O75886	525 aa		13.67	□□□□□ -0.22
FDPS-215	ENST00000490140	ZNF286B	P0CG31	522 aa		13.67	□□□□□ -0.22

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