RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 MAN1B1Q9UKM7 699 aa9.56□□□□□ -0.88
VTI1A-207ENST00000489357 SLC27A5Q9Y2P5 690 aa9.56□□□□□ -0.88
VTI1A-207ENST00000489357 PAXBP1Q9Y5B6 917 aa9.56□□□□□ -0.88
VTI1A-207ENST00000489357 TCP10L2B9ZVM9 353 aa9.55□□□□□ -0.88
VTI1A-207ENST00000489357 BIN1O00499 593 aa9.55□□□□□ -0.88
VTI1A-207ENST00000489357 SLC26A4O43511 780 aa9.55□□□□□ -0.88
VTI1A-207ENST00000489357 USP2O75604 605 aaPredicted RBP9.55□□□□□ -0.88
VTI1A-207ENST00000489357 TTLL1O95922 423 aa9.55□□□□□ -0.88
VTI1A-207ENST00000489357 SFPQP23246 707 aaKnown RBP eCLIP9.55□□□□□ -0.88
VTI1A-207ENST00000489357 CACNB3P54284 484 aa9.55□□□□□ -0.88
VTI1A-207ENST00000489357 FANCCQ00597 558 aa9.55□□□□□ -0.88
VTI1A-207ENST00000489357 DPYDQ12882 1025 aa9.55□□□□□ -0.88
VTI1A-207ENST00000489357 TUSC1Q2TAM9 212 aa9.55□□□□□ -0.88
VTI1A-207ENST00000489357 SUPT20HL1Q3ZLR7 823 aa9.55□□□□□ -0.88
VTI1A-207ENST00000489357 TJAP1Q5JTD0 557 aa9.55□□□□□ -0.88
VTI1A-207ENST00000489357 PIK3AP1Q6ZUJ8 805 aa9.55□□□□□ -0.88
VTI1A-207ENST00000489357 FOXP4Q8IVH2 680 aaPredicted RBP9.55□□□□□ -0.88
VTI1A-207ENST00000489357 MYRIPQ8NFW9 859 aa9.55□□□□□ -0.88
VTI1A-207ENST00000489357 CACTINQ8WUQ7 758 aaKnown RBP9.55□□□□□ -0.88
VTI1A-207ENST00000489357 SYMPKQ92797 1274 aaKnown RBP9.55□□□□□ -0.88
VTI1A-207ENST00000489357 MAP7D2Q96T17 732 aa9.55□□□□□ -0.88
VTI1A-207ENST00000489357 XPO4Q9C0E2 1151 aaKnown RBP9.55□□□□□ -0.88
VTI1A-207ENST00000489357 TMEM39BQ9GZU3 492 aa9.55□□□□□ -0.88
VTI1A-207ENST00000489357 IL21Q9HBE4 155 aa9.55□□□□□ -0.88
VTI1A-207ENST00000489357 VEZTQ9HBM0 779 aa9.55□□□□□ -0.88
VTI1A-207ENST00000489357 IFNKQ9P0W0 207 aa9.55□□□□□ -0.88
VTI1A-207ENST00000489357 PCDHGC3Q9UN70 934 aa9.55□□□□□ -0.88
VTI1A-207ENST00000489357 OTOFQ9HC10 1997 aa9.55□□□□□ -0.88
VTI1A-207ENST00000489357 THSD7BQ9C0I4 1608 aa9.54□□□□□ -0.88
VTI1A-207ENST00000489357 CYTH3O43739 400 aa9.54□□□□□ -0.88
VTI1A-207ENST00000489357 SERPINC1P01008 464 aa9.54□□□□□ -0.88
VTI1A-207ENST00000489357 HSPA1AP0DMV8 641 aaKnown RBP9.54□□□□□ -0.88
VTI1A-207ENST00000489357 HSPA1BP0DMV9 641 aaKnown RBP9.54□□□□□ -0.88
VTI1A-207ENST00000489357 SKILP12757 684 aa9.54□□□□□ -0.88
VTI1A-207ENST00000489357 ZNF18P17022 549 aa9.54□□□□□ -0.88
VTI1A-207ENST00000489357 TNNI2P48788 182 aa9.54□□□□□ -0.88
VTI1A-207ENST00000489357 UBASH3AP57075 661 aa9.54□□□□□ -0.88
VTI1A-207ENST00000489357 SPAG1Q07617 926 aa9.54□□□□□ -0.88
VTI1A-207ENST00000489357 KCNB1Q14721 858 aa9.54□□□□□ -0.88
VTI1A-207ENST00000489357 NONOQ15233 471 aaKnown RBP eCLIP9.54□□□□□ -0.88
VTI1A-207ENST00000489357 Q3C1V9 767 aa9.54□□□□□ -0.88
VTI1A-207ENST00000489357 SPATA1Q5VX52 437 aa9.54□□□□□ -0.88
VTI1A-207ENST00000489357 WWC2Q6AWC2 1192 aa9.54□□□□□ -0.88
VTI1A-207ENST00000489357 CYP4F22Q6NT55 531 aa9.54□□□□□ -0.88
VTI1A-207ENST00000489357 DTHD1Q6ZMT9 781 aa9.54□□□□□ -0.88
VTI1A-207ENST00000489357 HEATR3Q7Z4Q2 680 aa9.54□□□□□ -0.88
VTI1A-207ENST00000489357 STAG2Q8N3U4 1231 aa9.54□□□□□ -0.88
VTI1A-207ENST00000489357 C4orf32Q8N8J7 132 aa9.54□□□□□ -0.88
VTI1A-207ENST00000489357 C2orf69Q8N8R5 385 aa9.54□□□□□ -0.88
VTI1A-207ENST00000489357 PROCA1Q8NCQ7 364 aaPredicted RBP9.54□□□□□ -0.88
VTI1A-207ENST00000489357 CEP95Q96GE4 821 aa9.54□□□□□ -0.88
VTI1A-207ENST00000489357 PAGE5Q96GU1 130 aa9.54□□□□□ -0.88
VTI1A-207ENST00000489357 ZNF830Q96NB3 372 aaPredicted RBP9.54□□□□□ -0.88
VTI1A-207ENST00000489357 HSD3B7Q9H2F3 369 aa9.54□□□□□ -0.88
VTI1A-207ENST00000489357 SAP30BPQ9UHR5 308 aaKnown RBP9.54□□□□□ -0.88
VTI1A-207ENST00000489357 ZNF112Q9UJU3 913 aa9.54□□□□□ -0.88
VTI1A-207ENST00000489357 PYCARDQ9ULZ3 195 aa9.54□□□□□ -0.88
VTI1A-207ENST00000489357 PCDHA6Q9UN73 950 aa9.54□□□□□ -0.88
VTI1A-207ENST00000489357 R3HCC1Q9Y3T6 440 aaKnown RBP9.54□□□□□ -0.88
VTI1A-207ENST00000489357 PCDHA8Q9Y5H6 950 aa9.54□□□□□ -0.88
VTI1A-207ENST00000489357 VWA3AA6NCI4 1184 aa9.53□□□□□ -0.88
VTI1A-207ENST00000489357 DDTLA6NHG4 134 aaPredicted RBP9.53□□□□□ -0.88
VTI1A-207ENST00000489357 FAM155AB1AL88 458 aaPredicted RBP9.53□□□□□ -0.88
VTI1A-207ENST00000489357 PDHBP11177 359 aa9.53□□□□□ -0.88
VTI1A-207ENST00000489357 BMP6P22004 513 aa9.53□□□□□ -0.88
VTI1A-207ENST00000489357 NAPAP54920 295 aa9.53□□□□□ -0.88
VTI1A-207ENST00000489357 CCZ1BP86790 482 aa9.53□□□□□ -0.88
VTI1A-207ENST00000489357 CCZ1P86791 482 aaPredicted RBP9.53□□□□□ -0.88
VTI1A-207ENST00000489357 GRIN1Q05586 938 aa9.53□□□□□ -0.88
VTI1A-207ENST00000489357 TRAF1Q13077 416 aa9.53□□□□□ -0.88
VTI1A-207ENST00000489357 GRM1Q13255 1194 aa9.53□□□□□ -0.88
VTI1A-207ENST00000489357 SYCP1Q15431 976 aa9.53□□□□□ -0.88
VTI1A-207ENST00000489357 ZNF174Q15697 407 aa9.53□□□□□ -0.88
VTI1A-207ENST00000489357 CCDC144BQ3MJ40 725 aa9.53□□□□□ -0.88
VTI1A-207ENST00000489357 EARS2Q5JPH6 523 aaKnown RBP9.53□□□□□ -0.88
VTI1A-207ENST00000489357 PDXDC2PQ6P474 469 aa9.53□□□□□ -0.88
VTI1A-207ENST00000489357 MOB2Q70IA6 237 aa9.53□□□□□ -0.88
VTI1A-207ENST00000489357 NEK8Q86SG6 692 aa9.53□□□□□ -0.88
VTI1A-207ENST00000489357 VSTM4Q8IW00 320 aa9.53□□□□□ -0.88
VTI1A-207ENST00000489357 SLC44A5Q8NCS7 719 aa9.53□□□□□ -0.88
VTI1A-207ENST00000489357 ERCC4Q92889 916 aaPredicted RBP9.53□□□□□ -0.88
VTI1A-207ENST00000489357 MKL1Q969V6 931 aa9.53□□□□□ -0.88
VTI1A-207ENST00000489357 DHX58Q96C10 678 aa9.53□□□□□ -0.88
VTI1A-207ENST00000489357 CAPNS2Q96L46 248 aa9.53□□□□□ -0.88
VTI1A-207ENST00000489357 RAB34Q9BZG1 259 aa9.53□□□□□ -0.88
VTI1A-207ENST00000489357 DISC1Q9NRI5 854 aa9.53□□□□□ -0.88
VTI1A-207ENST00000489357 TMOD2Q9NZR1 351 aa9.53□□□□□ -0.88
VTI1A-207ENST00000489357 NRBP1Q9UHY1 535 aa9.53□□□□□ -0.88
VTI1A-207ENST00000489357 PHIPQ8WWQ0 1821 aa9.52□□□□□ -0.89
VTI1A-207ENST00000489357 PNMA6FA0A0J9YX94 578 aa9.52□□□□□ -0.89
VTI1A-207ENST00000489357 hCG_1642624A0A1W2PR95 340 aa9.52□□□□□ -0.89
VTI1A-207ENST00000489357 GOLGA6L9A6NEM1 432 aa9.52□□□□□ -0.89
VTI1A-207ENST00000489357 PHF20L1A8MW92 1017 aa9.52□□□□□ -0.89
VTI1A-207ENST00000489357 GCFC2P16383 781 aaKnown RBP9.52□□□□□ -0.89
VTI1A-207ENST00000489357 ATP2B1P20020 1258 aa9.52□□□□□ -0.89
VTI1A-207ENST00000489357 MCM7P33993 719 aa9.52□□□□□ -0.89
VTI1A-207ENST00000489357 CUL4BQ13620 913 aa9.52□□□□□ -0.89
VTI1A-207ENST00000489357 COBLL1Q53SF7 1204 aa9.52□□□□□ -0.89
VTI1A-207ENST00000489357 ZNF658Q5TYW1 1059 aaPredicted RBP9.52□□□□□ -0.89
VTI1A-207ENST00000489357 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms