RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 HOXA13P31271 388 aaPredicted RBP26.73■■□□□ 1.87
CUL4A-209ENST00000488558 PGM5Q15124 567 aa26.73■■□□□ 1.87
CUL4A-209ENST00000488558 LY6KQ17RY6 165 aa26.73■■□□□ 1.87
CUL4A-209ENST00000488558 NBPF20Q3BBV1 942 aa26.73■■□□□ 1.87
CUL4A-209ENST00000488558 NFXL1Q6ZNB6 911 aa26.73■■□□□ 1.87
CUL4A-209ENST00000488558 VSIG10LQ86VR7 867 aa26.73■■□□□ 1.87
CUL4A-209ENST00000488558 AFG1LQ8WV93 481 aa26.73■■□□□ 1.87
CUL4A-209ENST00000488558 MYL10Q9BUA6 226 aa26.73■■□□□ 1.87
CUL4A-209ENST00000488558 MRVI1Q9Y6F6 885 aa26.73■■□□□ 1.87
CUL4A-209ENST00000488558 TANC1Q9C0D5 1861 aa26.72■■□□□ 1.87
CUL4A-209ENST00000488558 FRMPD4Q14CM0 1322 aa26.72■■□□□ 1.87
CUL4A-209ENST00000488558 UMODL1Q5DID0 1318 aa26.72■■□□□ 1.87
CUL4A-209ENST00000488558 CDC45O75419 566 aa26.72■■□□□ 1.87
CUL4A-209ENST00000488558 RRP36Q96EU6 259 aaKnown RBP26.72■■□□□ 1.87
CUL4A-209ENST00000488558 GUCD1Q96NT3 240 aa26.72■■□□□ 1.87
CUL4A-209ENST00000488558 TRMT13Q9NUP7 481 aaKnown RBP26.72■■□□□ 1.87
CUL4A-209ENST00000488558 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.71■■□□□ 1.87
CUL4A-209ENST00000488558 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.71■■□□□ 1.87
CUL4A-209ENST00000488558 COL9A3Q14050 684 aaPredicted RBP26.71■■□□□ 1.87
CUL4A-209ENST00000488558 SGMS1Q86VZ5 419 aa26.71■■□□□ 1.87
CUL4A-209ENST00000488558 WNT8AQ9H1J5 351 aa26.71■■□□□ 1.87
CUL4A-209ENST00000488558 RGS20O76081 388 aa26.7■■□□□ 1.86
CUL4A-209ENST00000488558 CCND2P30279 289 aa26.7■■□□□ 1.86
CUL4A-209ENST00000488558 LAMC2Q13753 1193 aa26.7■■□□□ 1.86
CUL4A-209ENST00000488558 SEC63Q9UGP8 760 aaKnown RBP26.7■■□□□ 1.86
CUL4A-209ENST00000488558 TGFB3P10600 412 aa26.69■■□□□ 1.86
CUL4A-209ENST00000488558 MYCLP12524 364 aaPredicted RBP26.69■■□□□ 1.86
CUL4A-209ENST00000488558 CASTP20810 708 aaKnown RBP26.69■■□□□ 1.86
CUL4A-209ENST00000488558 DGKDQ16760 1214 aa26.69■■□□□ 1.86
CUL4A-209ENST00000488558 TSGA10IPQ3SY00 556 aa26.69■■□□□ 1.86
CUL4A-209ENST00000488558 FAM47CQ5HY64 1035 aa26.69■■□□□ 1.86
CUL4A-209ENST00000488558 ZNF365Q70YC5 407 aa26.69■■□□□ 1.86
CUL4A-209ENST00000488558 SESTD1Q86VW0 696 aa26.69■■□□□ 1.86
CUL4A-209ENST00000488558 IL31RAQ8NI17 732 aa26.69■■□□□ 1.86
CUL4A-209ENST00000488558 PPTC7Q8NI37 304 aa26.69■■□□□ 1.86
CUL4A-209ENST00000488558 HERVK_113Q902F9 699 aa26.69■■□□□ 1.86
CUL4A-209ENST00000488558 MTIF3Q9H2K0 278 aaKnown RBP26.69■■□□□ 1.86
CUL4A-209ENST00000488558 SLC12A7Q9Y666 1083 aa26.69■■□□□ 1.86
CUL4A-209ENST00000488558 COL6A3P12111 3177 aa26.69■■□□□ 1.86
CUL4A-209ENST00000488558 MYH7BA7E2Y1 1941 aa26.69■■□□□ 1.86
CUL4A-209ENST00000488558 STAM2O75886 525 aa26.68■■□□□ 1.86
CUL4A-209ENST00000488558 ACRP10323 421 aa26.68■■□□□ 1.86
CUL4A-209ENST00000488558 FCHSD1Q86WN1 690 aa26.68■■□□□ 1.86
CUL4A-209ENST00000488558 SEMA6BQ9H3T3 888 aa26.68■■□□□ 1.86
CUL4A-209ENST00000488558 PIK3CDO00329 1044 aa26.67■■□□□ 1.86
CUL4A-209ENST00000488558 PITPNM1O00562 1244 aa26.67■■□□□ 1.86
CUL4A-209ENST00000488558 PLEKHA8P1O95397 391 aa26.67■■□□□ 1.86
CUL4A-209ENST00000488558 PFKMP08237 780 aa26.67■■□□□ 1.86
CUL4A-209ENST00000488558 CYP2C9P11712 490 aa26.67■■□□□ 1.86
CUL4A-209ENST00000488558 HOXD8P13378 290 aaPredicted RBP26.67■■□□□ 1.86
CUL4A-209ENST00000488558 CCL23P55773 120 aa26.67■■□□□ 1.86
CUL4A-209ENST00000488558 DHX37Q8IY37 1157 aaKnown RBP26.67■■□□□ 1.86
CUL4A-209ENST00000488558 RPUSD2Q8IZ73 545 aaKnown RBP26.67■■□□□ 1.86
CUL4A-209ENST00000488558 SRBD1Q8N5C6 995 aaKnown RBP26.67■■□□□ 1.86
CUL4A-209ENST00000488558 KAT2BQ92831 832 aa26.67■■□□□ 1.86
CUL4A-209ENST00000488558 CCDC136Q96JN2 1154 aa26.67■■□□□ 1.86
CUL4A-209ENST00000488558 FAM161BQ96MY7 647 aa26.67■■□□□ 1.86
CUL4A-209ENST00000488558 NEK1Q96PY6 1258 aa26.67■■□□□ 1.86
CUL4A-209ENST00000488558 KATNAL1Q9BW62 490 aa26.67■■□□□ 1.86
CUL4A-209ENST00000488558 TTYH1Q9H313 450 aaPredicted RBP26.67■■□□□ 1.86
CUL4A-209ENST00000488558 FGBP02675 491 aa26.66■■□□□ 1.86
CUL4A-209ENST00000488558 MYSM1Q5VVJ2 828 aa26.66■■□□□ 1.86
CUL4A-209ENST00000488558 PIBF1Q8WXW3 757 aa26.66■■□□□ 1.86
CUL4A-209ENST00000488558 F2P00734 622 aa26.65■■□□□ 1.86
CUL4A-209ENST00000488558 DNAJB2P25686 324 aa26.65■■□□□ 1.86
CUL4A-209ENST00000488558 KRT32Q14532 448 aa26.65■■□□□ 1.86
CUL4A-209ENST00000488558 GNPTABQ3T906 1256 aa26.65■■□□□ 1.86
CUL4A-209ENST00000488558 CELF3Q5SZQ8 465 aaKnown RBP26.65■■□□□ 1.86
CUL4A-209ENST00000488558 TMTC3Q6ZXV5 915 aa26.65■■□□□ 1.86
CUL4A-209ENST00000488558 FANCBQ8NB91 859 aa26.65■■□□□ 1.86
CUL4A-209ENST00000488558 CUL5Q93034 780 aa26.65■■□□□ 1.86
CUL4A-209ENST00000488558 LRRC2Q9BYS8 371 aa26.65■■□□□ 1.86
CUL4A-209ENST00000488558 RXRAP19793 462 aa26.64■■□□□ 1.86
CUL4A-209ENST00000488558 UBA1P22314 1058 aaKnown RBP26.64■■□□□ 1.86
CUL4A-209ENST00000488558 RFC2P35250 354 aa26.64■■□□□ 1.86
CUL4A-209ENST00000488558 EXOSC10Q01780 885 aaKnown RBP26.64■■□□□ 1.86
CUL4A-209ENST00000488558 XRRA1Q6P2D8 792 aa26.64■■□□□ 1.86
CUL4A-209ENST00000488558 SMARCC2Q8TAQ2 1214 aa26.64■■□□□ 1.86
CUL4A-209ENST00000488558 INPP4AQ96PE3 977 aaPredicted RBP26.64■■□□□ 1.86
CUL4A-209ENST00000488558 PPFIA4O75335 1185 aa26.63■■□□□ 1.85
CUL4A-209ENST00000488558 GGPS1O95749 300 aa26.63■■□□□ 1.85
CUL4A-209ENST00000488558 ICAM3P32942 547 aa26.63■■□□□ 1.85
CUL4A-209ENST00000488558 BFSP2Q13515 415 aa26.63■■□□□ 1.85
CUL4A-209ENST00000488558 APOA5Q6Q788 366 aa26.63■■□□□ 1.85
CUL4A-209ENST00000488558 SYNE3Q6ZMZ3 975 aa26.63■■□□□ 1.85
CUL4A-209ENST00000488558 DHX32Q7L7V1 743 aaKnown RBP26.63■■□□□ 1.85
CUL4A-209ENST00000488558 MICU3Q86XE3 530 aa26.63■■□□□ 1.85
CUL4A-209ENST00000488558 VWCEQ96DN2 955 aa26.63■■□□□ 1.85
CUL4A-209ENST00000488558 SCLYQ96I15 445 aa26.63■■□□□ 1.85
CUL4A-209ENST00000488558 CDX2Q99626 313 aaPredicted RBP26.63■■□□□ 1.85
CUL4A-209ENST00000488558 NOD1Q9Y239 953 aa26.63■■□□□ 1.85
CUL4A-209ENST00000488558 SCN5AQ14524 2016 aa26.62■■□□□ 1.85
CUL4A-209ENST00000488558 HAS3O00219 553 aa26.62■■□□□ 1.85
CUL4A-209ENST00000488558 MEIS2O14770 477 aa26.62■■□□□ 1.85
CUL4A-209ENST00000488558 MRPS9P82933 396 aaKnown RBP26.62■■□□□ 1.85
CUL4A-209ENST00000488558 RASEFQ8IZ41 740 aa26.62■■□□□ 1.85
CUL4A-209ENST00000488558 CMTR1Q8N1G2 835 aaKnown RBP26.62■■□□□ 1.85
CUL4A-209ENST00000488558 CCDC155Q8N6L0 562 aa26.62■■□□□ 1.85
CUL4A-209ENST00000488558 CAGE1Q8TC20 777 aa26.62■■□□□ 1.85
CUL4A-209ENST00000488558 RBM28Q9NW13 759 aaKnown RBP26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms