RNA–Protein interactions for RNA: ENST00000487201.1

RHBDF1-210, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 1,708 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-210ENST00000487201 REXO1Q8N1G1 1221 aaKnown RBP25.71■■□□□ 1.71
RHBDF1-210ENST00000487201 ANO3Q9BYT9 981 aa25.71■■□□□ 1.71
RHBDF1-210ENST00000487201 SMPD1P17405 629 aa25.7■■□□□ 1.7
RHBDF1-210ENST00000487201 AP3B2Q13367 1082 aa25.7■■□□□ 1.7
RHBDF1-210ENST00000487201 PCNX4Q63HM2 1172 aa25.7■■□□□ 1.7
RHBDF1-210ENST00000487201 WASF1Q92558 559 aa25.7■■□□□ 1.7
RHBDF1-210ENST00000487201 PCDHA4Q9UN74 947 aa25.7■■□□□ 1.7
RHBDF1-210ENST00000487201 GNEQ9Y223 722 aaKnown RBP25.7■■□□□ 1.7
RHBDF1-210ENST00000487201 ARIH2O95376 493 aa25.69■■□□□ 1.7
RHBDF1-210ENST00000487201 FOSP01100 380 aaPredicted RBP25.69■■□□□ 1.7
RHBDF1-210ENST00000487201 CCND2P30279 289 aa25.69■■□□□ 1.7
RHBDF1-210ENST00000487201 MNX1P50219 401 aaPredicted RBP25.69■■□□□ 1.7
RHBDF1-210ENST00000487201 DAGLBQ8NCG7 672 aa25.69■■□□□ 1.7
RHBDF1-210ENST00000487201 RARBP10826 455 aa25.68■■□□□ 1.7
RHBDF1-210ENST00000487201 TNFAIP2Q03169 654 aa25.68■■□□□ 1.7
RHBDF1-210ENST00000487201 GJC2Q5T442 439 aaPredicted RBP25.68■■□□□ 1.7
RHBDF1-210ENST00000487201 IQSEC1Q6DN90 963 aa25.68■■□□□ 1.7
RHBDF1-210ENST00000487201 SEPT14Q6ZU15 432 aa25.68■■□□□ 1.7
RHBDF1-210ENST00000487201 BICD2Q8TD16 824 aa25.68■■□□□ 1.7
RHBDF1-210ENST00000487201 CRYGNQ8WXF5 182 aa25.68■■□□□ 1.7
RHBDF1-210ENST00000487201 WDR11Q9BZH6 1224 aa25.68■■□□□ 1.7
RHBDF1-210ENST00000487201 TNRC18O15417 2968 aaPredicted RBP25.68■■□□□ 1.7
RHBDF1-210ENST00000487201 CAPN15O75808 1086 aa25.68■■□□□ 1.7
RHBDF1-210ENST00000487201 TFRCP02786 760 aaKnown RBP25.68■■□□□ 1.7
RHBDF1-210ENST00000487201 CCDC62Q6P9F0 684 aa25.68■■□□□ 1.7
RHBDF1-210ENST00000487201 SCFD2Q8WU76 684 aa25.68■■□□□ 1.7
RHBDF1-210ENST00000487201 DUSP11O75319 330 aaKnown RBP25.67■■□□□ 1.7
RHBDF1-210ENST00000487201 SREBF1P36956 1147 aa25.67■■□□□ 1.7
RHBDF1-210ENST00000487201 IRX5P78411 483 aaPredicted RBP25.67■■□□□ 1.7
RHBDF1-210ENST00000487201 HMGN5P82970 282 aaKnown RBP25.67■■□□□ 1.7
RHBDF1-210ENST00000487201 GALNT17Q6IS24 598 aa25.67■■□□□ 1.7
RHBDF1-210ENST00000487201 BLIDQ8IZY5 108 aa25.67■■□□□ 1.7
RHBDF1-210ENST00000487201 INPP4AQ96PE3 977 aaPredicted RBP25.67■■□□□ 1.7
RHBDF1-210ENST00000487201 PGK1P00558 417 aa25.66■■□□□ 1.7
RHBDF1-210ENST00000487201 CUL4AQ13619 759 aa25.66■■□□□ 1.7
RHBDF1-210ENST00000487201 DUSP28Q4G0W2 176 aa25.66■■□□□ 1.7
RHBDF1-210ENST00000487201 OXER1Q8TDS5 423 aa25.66■■□□□ 1.7
RHBDF1-210ENST00000487201 SNX21Q969T3 373 aa25.66■■□□□ 1.7
RHBDF1-210ENST00000487201 XPNPEP3Q9NQH7 507 aa25.66■■□□□ 1.7
RHBDF1-210ENST00000487201 RTEL1Q9NZ71 1219 aa25.66■■□□□ 1.7
RHBDF1-210ENST00000487201 SYNRGQ9UMZ2 1314 aa25.66■■□□□ 1.7
RHBDF1-210ENST00000487201 ADAMTS4O75173 837 aa25.66■■□□□ 1.7
RHBDF1-210ENST00000487201 XBP1P17861 261 aa25.66■■□□□ 1.7
RHBDF1-210ENST00000487201 FOSBP53539 338 aa25.66■■□□□ 1.7
RHBDF1-210ENST00000487201 XRRA1Q6P2D8 792 aa25.66■■□□□ 1.7
RHBDF1-210ENST00000487201 UBE2Q1Q7Z7E8 422 aa25.66■■□□□ 1.7
RHBDF1-210ENST00000487201 DOCK5Q9H7D0 1870 aa25.65■■□□□ 1.7
RHBDF1-210ENST00000487201 CTAGE5O15320 804 aa25.65■■□□□ 1.7
RHBDF1-210ENST00000487201 EDIL3O43854 480 aa25.65■■□□□ 1.7
RHBDF1-210ENST00000487201 STAM2O75886 525 aa25.65■■□□□ 1.7
RHBDF1-210ENST00000487201 ITGB5P18084 799 aa25.65■■□□□ 1.7
RHBDF1-210ENST00000487201 SEMA3FQ13275 785 aa25.65■■□□□ 1.7
RHBDF1-210ENST00000487201 MYADML2A6NDP7 307 aa25.64■■□□□ 1.7
RHBDF1-210ENST00000487201 ARHGAP4P98171 946 aa25.64■■□□□ 1.7
RHBDF1-210ENST00000487201 LY6KQ17RY6 165 aa25.64■■□□□ 1.7
RHBDF1-210ENST00000487201 KRT40Q6A162 431 aa25.64■■□□□ 1.7
RHBDF1-210ENST00000487201 COPS5Q92905 334 aa25.64■■□□□ 1.7
RHBDF1-210ENST00000487201 UPF3AQ9H1J1 476 aaKnown RBP25.64■■□□□ 1.7
RHBDF1-210ENST00000487201 DDX41Q9UJV9 622 aaKnown RBP25.64■■□□□ 1.7
RHBDF1-210ENST00000487201 MMP1P03956 469 aa25.63■■□□□ 1.69
RHBDF1-210ENST00000487201 TXNP10599 105 aaKnown RBP25.63■■□□□ 1.69
RHBDF1-210ENST00000487201 SP2Q02086 613 aa25.63■■□□□ 1.69
RHBDF1-210ENST00000487201 TTLL4Q14679 1199 aa25.63■■□□□ 1.69
RHBDF1-210ENST00000487201 LRRC41Q15345 812 aa25.63■■□□□ 1.69
RHBDF1-210ENST00000487201 MCTP2Q6DN12 878 aa25.63■■□□□ 1.69
RHBDF1-210ENST00000487201 TLK2Q86UE8 772 aa25.63■■□□□ 1.69
RHBDF1-210ENST00000487201 CYP2W1Q8TAV3 490 aa25.63■■□□□ 1.69
RHBDF1-210ENST00000487201 DIS3LQ8TF46 1054 aaKnown RBP25.63■■□□□ 1.69
RHBDF1-210ENST00000487201 EHMT1Q9H9B1 1298 aa25.63■■□□□ 1.69
RHBDF1-210ENST00000487201 UBIAD1Q9Y5Z9 338 aa25.63■■□□□ 1.69
RHBDF1-210ENST00000487201 K7ELQ4 463 aaPredicted RBP25.63■■□□□ 1.69
RHBDF1-210ENST00000487201 GJA9P57773 515 aa25.63■■□□□ 1.69
RHBDF1-210ENST00000487201 NKX3-2P78367 333 aa25.63■■□□□ 1.69
RHBDF1-210ENST00000487201 TNFRSF25Q93038 417 aa25.63■■□□□ 1.69
RHBDF1-210ENST00000487201 ICAM3P32942 547 aa25.62■■□□□ 1.69
RHBDF1-210ENST00000487201 ANKLE1Q8NAG6 615 aa25.62■■□□□ 1.69
RHBDF1-210ENST00000487201 KLHDC9Q8NEP7 349 aa25.62■■□□□ 1.69
RHBDF1-210ENST00000487201 Q9Y3F1 56 aa25.62■■□□□ 1.69
RHBDF1-210ENST00000487201 MRVI1Q9Y6F6 885 aa25.62■■□□□ 1.69
RHBDF1-210ENST00000487201 SPATA31C2B4DYI2 1134 aa25.61■■□□□ 1.69
RHBDF1-210ENST00000487201 CYP3A4P08684 503 aa25.61■■□□□ 1.69
RHBDF1-210ENST00000487201 CAPN2P17655 700 aa25.61■■□□□ 1.69
RHBDF1-210ENST00000487201 GUCY1B3Q02153 619 aa25.61■■□□□ 1.69
RHBDF1-210ENST00000487201 NR5A1Q13285 461 aa25.61■■□□□ 1.69
RHBDF1-210ENST00000487201 EARS2Q5JPH6 523 aaKnown RBP25.61■■□□□ 1.69
RHBDF1-210ENST00000487201 CCSAPQ6IQ19 270 aaPredicted RBP25.61■■□□□ 1.69
RHBDF1-210ENST00000487201 FBXO18Q8NFZ0 1043 aa25.61■■□□□ 1.69
RHBDF1-210ENST00000487201 C8orf76Q96K31 380 aa25.61■■□□□ 1.69
RHBDF1-210ENST00000487201 FAM86B1E9PN63 330 aa25.6■■□□□ 1.69
RHBDF1-210ENST00000487201 DYNC1LI2O43237 492 aaPredicted RBP25.6■■□□□ 1.69
RHBDF1-210ENST00000487201 FAM86B2P0C5J1 330 aa25.6■■□□□ 1.69
RHBDF1-210ENST00000487201 GJB2P29033 226 aa25.6■■□□□ 1.69
RHBDF1-210ENST00000487201 FAM184AQ8NB25 1140 aa25.6■■□□□ 1.69
RHBDF1-210ENST00000487201 BCAS3Q9H6U6 928 aa25.6■■□□□ 1.69
RHBDF1-210ENST00000487201 TSHZ2Q9NRE2 1034 aa25.6■■□□□ 1.69
RHBDF1-210ENST00000487201 DNM1LO00429 736 aa25.6■■□□□ 1.69
RHBDF1-210ENST00000487201 NKRFO15226 690 aaKnown RBP eCLIP25.6■■□□□ 1.69
RHBDF1-210ENST00000487201 FARP2O94887 1054 aaPredicted RBP25.6■■□□□ 1.69
RHBDF1-210ENST00000487201 TGFB3P10600 412 aa25.6■■□□□ 1.69
RHBDF1-210ENST00000487201 UBA1P22314 1058 aaKnown RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms