RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 LARGE1O95461 756 aa6.68□□□□□ -1.34
CUX1-208ENST00000485792 ZKSCAN1P17029 563 aaPredicted RBP6.68□□□□□ -1.34
CUX1-208ENST00000485792 CDC27P30260 824 aa6.68□□□□□ -1.34
CUX1-208ENST00000485792 MLLT1Q03111 559 aaPredicted RBP6.68□□□□□ -1.34
CUX1-208ENST00000485792 TOB2Q14106 344 aaPredicted RBP6.68□□□□□ -1.34
CUX1-208ENST00000485792 GRM4Q14833 912 aa6.68□□□□□ -1.34
CUX1-208ENST00000485792 QRICH1Q2TAL8 776 aa6.68□□□□□ -1.34
CUX1-208ENST00000485792 ASPRV1Q53RT3 343 aa6.68□□□□□ -1.34
CUX1-208ENST00000485792 TJAP1Q5JTD0 557 aa6.68□□□□□ -1.34
CUX1-208ENST00000485792 SYDE2Q5VT97 1194 aa6.68□□□□□ -1.34
CUX1-208ENST00000485792 BLOC1S3Q6QNY0 202 aa6.68□□□□□ -1.34
CUX1-208ENST00000485792 NCAPG2Q86XI2 1143 aa6.68□□□□□ -1.34
CUX1-208ENST00000485792 CPXCR1Q8N123 301 aa6.68□□□□□ -1.34
CUX1-208ENST00000485792 TMTC2Q8N394 836 aa6.68□□□□□ -1.34
CUX1-208ENST00000485792 TMEM87BQ96K49 555 aa6.68□□□□□ -1.34
CUX1-208ENST00000485792 KIF2CQ99661 725 aa6.68□□□□□ -1.34
CUX1-208ENST00000485792 TINF2Q9BSI4 451 aa6.68□□□□□ -1.34
CUX1-208ENST00000485792 USP26Q9BXU7 913 aa6.68□□□□□ -1.34
CUX1-208ENST00000485792 PRO3102Q9H379 93 aa6.68□□□□□ -1.34
CUX1-208ENST00000485792 HMX1Q9NP08 348 aaPredicted RBP6.68□□□□□ -1.34
CUX1-208ENST00000485792 ANO2Q9NQ90 1003 aa6.68□□□□□ -1.34
CUX1-208ENST00000485792 HOMER2Q9NSB8 354 aa6.68□□□□□ -1.34
CUX1-208ENST00000485792 RNF146Q9NTX7 359 aa6.68□□□□□ -1.34
CUX1-208ENST00000485792 CYP39A1Q9NYL5 469 aa6.68□□□□□ -1.34
CUX1-208ENST00000485792 PCDHGC3Q9UN70 934 aa6.68□□□□□ -1.34
CUX1-208ENST00000485792 IVNS1ABPQ9Y6Y0 642 aa6.68□□□□□ -1.34
CUX1-208ENST00000485792 REV3LO60673 3130 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 hCG_1642624A0A1W2PR95 340 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 RBM47A0AV96 593 aaKnown RBP6.67□□□□□ -1.34
CUX1-208ENST00000485792 PRC1O43663 620 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 ADAMTS4O75173 837 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 RGS20O76081 388 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 ARIH2O95376 493 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 NEFLP07196 543 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 EDNRBP24530 442 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 MCM5P33992 734 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 RCAN1P53805 252 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 COPS2P61201 443 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 TRDNQ13061 729 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 PLS1Q14651 629 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 KCTD2Q14681 263 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 CDC37Q16543 378 aaPredicted RBP6.67□□□□□ -1.34
CUX1-208ENST00000485792 CCDC96Q2M329 555 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 IFIT1BQ5T764 474 aaKnown RBP6.67□□□□□ -1.34
CUX1-208ENST00000485792 CCSAPQ6IQ19 270 aaPredicted RBP6.67□□□□□ -1.34
CUX1-208ENST00000485792 KIAA1211Q6ZU35 1233 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 ADGRF4Q8IZF3 695 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 SRBD1Q8N5C6 995 aaKnown RBP6.67□□□□□ -1.34
CUX1-208ENST00000485792 SAMD3Q8N6K7 520 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 GPKOWQ92917 476 aaPredicted RBP eCLIP6.67□□□□□ -1.347e-6■□□□□ 8.1
CUX1-208ENST00000485792 VWCEQ96DN2 955 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 DEFB118Q96PH6 123 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 TRERF1Q96PN7 1200 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 MMP19Q99542 508 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 BCAS3Q9H6U6 928 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 ACAD9Q9H845 621 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 KAT14Q9H8E8 782 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 PDGFCQ9NRA1 345 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 TOMM22Q9NS69 142 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 SLC5A4Q9NY91 659 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 SLC27A5Q9Y2P5 690 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 ATG2AQ2TAZ0 1938 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 FRMPD4Q14CM0 1322 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 COL4A6Q14031 1691 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 COL6A3P12111 3177 aa6.67□□□□□ -1.34
CUX1-208ENST00000485792 KLRF2D3W0D1 207 aa6.66□□□□□ -1.34
CUX1-208ENST00000485792 IFIT3O14879 490 aaKnown RBP6.66□□□□□ -1.34
CUX1-208ENST00000485792 MSCO60682 206 aa6.66□□□□□ -1.34
CUX1-208ENST00000485792 NR1I2O75469 434 aa6.66□□□□□ -1.34
CUX1-208ENST00000485792 DDAH1O94760 285 aa6.66□□□□□ -1.34
CUX1-208ENST00000485792 PARP1P09874 1014 aaKnown RBP6.66□□□□□ -1.34
CUX1-208ENST00000485792 HSD17B4P51659 736 aa6.66□□□□□ -1.34
CUX1-208ENST00000485792 SEMA3FQ13275 785 aa6.66□□□□□ -1.34
CUX1-208ENST00000485792 WTAPQ15007 396 aa6.66□□□□□ -1.34
CUX1-208ENST00000485792 C1orf53Q5VUE5 145 aa6.66□□□□□ -1.34
CUX1-208ENST00000485792 MFSD14CQ5VZR4 134 aa6.66□□□□□ -1.34
CUX1-208ENST00000485792 TAPT1Q6NXT6 567 aa6.66□□□□□ -1.34
CUX1-208ENST00000485792 DHX32Q7L7V1 743 aaKnown RBP6.66□□□□□ -1.34
CUX1-208ENST00000485792 DPP9Q86TI2 863 aa6.66□□□□□ -1.34
CUX1-208ENST00000485792 FBXO16Q8IX29 292 aaPredicted RBP6.66□□□□□ -1.34
CUX1-208ENST00000485792 CCDC144CPQ8IYA2 1237 aa6.66□□□□□ -1.34
CUX1-208ENST00000485792 ZNF654Q8IZM8 581 aa6.66□□□□□ -1.34
CUX1-208ENST00000485792 KLHDC9Q8NEP7 349 aa6.66□□□□□ -1.34
CUX1-208ENST00000485792 PPP1R13LQ8WUF5 828 aa6.66□□□□□ -1.34
CUX1-208ENST00000485792 NEK1Q96PY6 1258 aa6.66□□□□□ -1.34
CUX1-208ENST00000485792 UBAC1Q9BSL1 405 aa6.66□□□□□ -1.34
CUX1-208ENST00000485792 SPZ1Q9BXG8 430 aa6.66□□□□□ -1.34
CUX1-208ENST00000485792 TM6SF1Q9BZW5 370 aa6.66□□□□□ -1.34
CUX1-208ENST00000485792 UPF3AQ9H1J1 476 aaKnown RBP6.66□□□□□ -1.34
CUX1-208ENST00000485792 ALDH8A1Q9H2A2 487 aaPredicted RBP6.66□□□□□ -1.34
CUX1-208ENST00000485792 MAP3K20Q9NYL2 800 aaKnown RBP6.66□□□□□ -1.34
CUX1-208ENST00000485792 DDX20Q9UHI6 824 aaKnown RBP6.66□□□□□ -1.34
CUX1-208ENST00000485792 SYNRGQ9UMZ2 1314 aa6.66□□□□□ -1.34
CUX1-208ENST00000485792 CHD9Q3L8U1 2897 aa6.66□□□□□ -1.34
CUX1-208ENST00000485792 TRANK1O15050 2925 aa6.66□□□□□ -1.34
CUX1-208ENST00000485792 CHD7Q9P2D1 2997 aa6.65□□□□□ -1.34
CUX1-208ENST00000485792 ZBTB5O15062 677 aa6.65□□□□□ -1.34
CUX1-208ENST00000485792 PPFIA3O75145 1194 aa6.65□□□□□ -1.34
CUX1-208ENST00000485792 REC8O95072 547 aa6.65□□□□□ -1.34
CUX1-208ENST00000485792 CD2BP2O95400 341 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms