RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 IWS1Q96ST2 819 aa10.68□□□□□ -0.7
SHROOM3-207ENST00000485780 RMDN3Q96TC7 470 aa10.68□□□□□ -0.7
SHROOM3-207ENST00000485780 PXMP2Q9NR77 195 aa10.68□□□□□ -0.7
SHROOM3-207ENST00000485780 PCDHA4Q9UN74 947 aa10.68□□□□□ -0.7
SHROOM3-207ENST00000485780 COLQQ9Y215 455 aaPredicted RBP10.68□□□□□ -0.7
SHROOM3-207ENST00000485780 KIF3AQ9Y496 699 aa10.68□□□□□ -0.7
SHROOM3-207ENST00000485780 SEPT4O43236 478 aa10.67□□□□□ -0.7
SHROOM3-207ENST00000485780 MYCNP04198 464 aaPredicted RBP10.67□□□□□ -0.7
SHROOM3-207ENST00000485780 GJB2P29033 226 aa10.67□□□□□ -0.7
SHROOM3-207ENST00000485780 SREBF1P36956 1147 aa10.67□□□□□ -0.7
SHROOM3-207ENST00000485780 PGM5Q15124 567 aa10.67□□□□□ -0.7
SHROOM3-207ENST00000485780 ANO1Q5XXA6 986 aa10.67□□□□□ -0.7
SHROOM3-207ENST00000485780 KRT40Q6A162 431 aa10.67□□□□□ -0.7
SHROOM3-207ENST00000485780 BLIDQ8IZY5 108 aa10.67□□□□□ -0.7
SHROOM3-207ENST00000485780 TRPV1Q8NER1 839 aa10.67□□□□□ -0.7
SHROOM3-207ENST00000485780 FBXO18Q8NFZ0 1043 aa10.67□□□□□ -0.7
SHROOM3-207ENST00000485780 ANO3Q9BYT9 981 aa10.67□□□□□ -0.7
SHROOM3-207ENST00000485780 GJB4Q9NTQ9 266 aa10.67□□□□□ -0.7
SHROOM3-207ENST00000485780 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.67□□□□□ -0.7
SHROOM3-207ENST00000485780 MYH15Q9Y2K3 1946 aa10.66□□□□□ -0.7
SHROOM3-207ENST00000485780 RBM47A0AV96 593 aaKnown RBP10.66□□□□□ -0.7
SHROOM3-207ENST00000485780 SPDYE3A6NKU9 549 aa10.66□□□□□ -0.7
SHROOM3-207ENST00000485780 B4DLN1 442 aa10.66□□□□□ -0.7
SHROOM3-207ENST00000485780 KBTBD13C9JR72 458 aa10.66□□□□□ -0.7
SHROOM3-207ENST00000485780 STAM2O75886 525 aa10.66□□□□□ -0.7
SHROOM3-207ENST00000485780 NR3C2P08235 984 aa10.66□□□□□ -0.7
SHROOM3-207ENST00000485780 ZNF865P0CJ78 1059 aaPredicted RBP10.66□□□□□ -0.7
SHROOM3-207ENST00000485780 MNX1P50219 401 aaPredicted RBP10.66□□□□□ -0.7
SHROOM3-207ENST00000485780 NLRP5P59047 1200 aa10.66□□□□□ -0.7
SHROOM3-207ENST00000485780 PRAMEF19Q5SWL8 479 aa10.66□□□□□ -0.7
SHROOM3-207ENST00000485780 PCNX4Q63HM2 1172 aa10.66□□□□□ -0.7
SHROOM3-207ENST00000485780 XRRA1Q6P2D8 792 aa10.66□□□□□ -0.7
SHROOM3-207ENST00000485780 VSIG10LQ86VR7 867 aa10.66□□□□□ -0.7
SHROOM3-207ENST00000485780 ARRDC4Q8NCT1 418 aa10.66□□□□□ -0.7
SHROOM3-207ENST00000485780 IL31RAQ8NI17 732 aa10.66□□□□□ -0.7
SHROOM3-207ENST00000485780 C8orf76Q96K31 380 aa10.66□□□□□ -0.7
SHROOM3-207ENST00000485780 ABHD16BQ9H3Z7 469 aa10.66□□□□□ -0.7
SHROOM3-207ENST00000485780 VTA1Q9NP79 307 aa10.66□□□□□ -0.7
SHROOM3-207ENST00000485780 PCDHA6Q9UN73 950 aa10.66□□□□□ -0.7
SHROOM3-207ENST00000485780 KCNJ14Q9UNX9 436 aa10.66□□□□□ -0.7
SHROOM3-207ENST00000485780 SMC3Q9UQE7 1217 aa10.66□□□□□ -0.7
SHROOM3-207ENST00000485780 CNPY2Q9Y2B0 182 aa10.66□□□□□ -0.7
SHROOM3-207ENST00000485780 PCDHA8Q9Y5H6 950 aa10.66□□□□□ -0.7
SHROOM3-207ENST00000485780 DNAH12Q6ZR08 3092 aa10.65□□□□□ -0.7
SHROOM3-207ENST00000485780 DNM1LO00429 736 aa10.65□□□□□ -0.7
SHROOM3-207ENST00000485780 EDIL3O43854 480 aa10.65□□□□□ -0.7
SHROOM3-207ENST00000485780 RGS20O76081 388 aa10.65□□□□□ -0.7
SHROOM3-207ENST00000485780 CYP3A4P08684 503 aa10.65□□□□□ -0.7
SHROOM3-207ENST00000485780 RARBP10826 455 aa10.65□□□□□ -0.7
SHROOM3-207ENST00000485780 COL6A1P12109 1028 aa10.65□□□□□ -0.7
SHROOM3-207ENST00000485780 EIF2AK2P19525 551 aaKnown RBP10.65□□□□□ -0.7
SHROOM3-207ENST00000485780 MRPS9P82933 396 aaKnown RBP10.65□□□□□ -0.7
SHROOM3-207ENST00000485780 GJC2Q5T442 439 aaPredicted RBP10.65□□□□□ -0.7
SHROOM3-207ENST00000485780 ARHGEF16Q5VV41 709 aa10.65□□□□□ -0.7
SHROOM3-207ENST00000485780 TAPT1Q6NXT6 567 aa10.65□□□□□ -0.7
SHROOM3-207ENST00000485780 FCHSD1Q86WN1 690 aa10.65□□□□□ -0.7
SHROOM3-207ENST00000485780 FAM184AQ8NB25 1140 aa10.65□□□□□ -0.7
SHROOM3-207ENST00000485780 INPP4AQ96PE3 977 aaPredicted RBP10.65□□□□□ -0.7
SHROOM3-207ENST00000485780 MPHOSPH6Q99547 160 aaKnown RBP10.65□□□□□ -0.7
SHROOM3-207ENST00000485780 SENP6Q9GZR1 1112 aaPredicted RBP10.65□□□□□ -0.7
SHROOM3-207ENST00000485780 EHMT1Q9H9B1 1298 aa10.65□□□□□ -0.7
SHROOM3-207ENST00000485780 TMEM260Q9NX78 707 aa10.65□□□□□ -0.7
SHROOM3-207ENST00000485780 ZMYND8Q9ULU4 1186 aaPredicted RBP10.65□□□□□ -0.7
SHROOM3-207ENST00000485780 DDX49Q9Y6V7 483 aaKnown RBP10.65□□□□□ -0.7
SHROOM3-207ENST00000485780 DOCK5Q9H7D0 1870 aa10.65□□□□□ -0.7
SHROOM3-207ENST00000485780 EIF3JO75822 258 aaKnown RBP10.64□□□□□ -0.71
SHROOM3-207ENST00000485780 CCND2P30279 289 aa10.64□□□□□ -0.71
SHROOM3-207ENST00000485780 CIITAP33076 1130 aa10.64□□□□□ -0.71
SHROOM3-207ENST00000485780 KRT2P35908 639 aa10.64□□□□□ -0.71
SHROOM3-207ENST00000485780 PDE4DQ08499 809 aa10.64□□□□□ -0.71
SHROOM3-207ENST00000485780 ACVR2BQ13705 512 aa10.64□□□□□ -0.71
SHROOM3-207ENST00000485780 TRIM29Q14134 588 aa10.64□□□□□ -0.71
SHROOM3-207ENST00000485780 STXBP2Q15833 593 aa10.64□□□□□ -0.71
SHROOM3-207ENST00000485780 JAKMIP3Q5VZ66 844 aa10.64□□□□□ -0.71
SHROOM3-207ENST00000485780 KRT25Q7Z3Z0 450 aa10.64□□□□□ -0.71
SHROOM3-207ENST00000485780 DIS3L2Q8IYB7 885 aaKnown RBP10.64□□□□□ -0.71
SHROOM3-207ENST00000485780 RASGRP4Q8TDF6 673 aa10.64□□□□□ -0.71
SHROOM3-207ENST00000485780 OXER1Q8TDS5 423 aa10.64□□□□□ -0.71
SHROOM3-207ENST00000485780 FOXP1Q9H334 677 aaPredicted RBP10.64□□□□□ -0.71
SHROOM3-207ENST00000485780 BRMS1Q9HCU9 246 aa10.64□□□□□ -0.71
SHROOM3-207ENST00000485780 ZHX1Q9UKY1 873 aaPredicted RBP10.64□□□□□ -0.71
SHROOM3-207ENST00000485780 UBIAD1Q9Y5Z9 338 aa10.64□□□□□ -0.71
SHROOM3-207ENST00000485780 WDR81Q562E7 1941 aa10.63□□□□□ -0.71
SHROOM3-207ENST00000485780 BTBD18B2RXH4 712 aa10.63□□□□□ -0.71
SHROOM3-207ENST00000485780 AKR1A1P14550 325 aa10.63□□□□□ -0.71
SHROOM3-207ENST00000485780 SYN1P17600 705 aa10.63□□□□□ -0.71
SHROOM3-207ENST00000485780 PDCP20941 246 aa10.63□□□□□ -0.71
SHROOM3-207ENST00000485780 U2AF2P26368 475 aaKnown RBP eCLIP10.63□□□□□ -0.71
SHROOM3-207ENST00000485780 ICAM3P32942 547 aa10.63□□□□□ -0.71
SHROOM3-207ENST00000485780 ATN1P54259 1190 aaPredicted RBP10.63□□□□□ -0.71
SHROOM3-207ENST00000485780 NKX3-2P78367 333 aa10.63□□□□□ -0.71
SHROOM3-207ENST00000485780 ARHGAP4P98171 946 aa10.63□□□□□ -0.71
SHROOM3-207ENST00000485780 NR5A1Q13285 461 aa10.63□□□□□ -0.71
SHROOM3-207ENST00000485780 LRRC26Q2I0M4 334 aa10.63□□□□□ -0.71
SHROOM3-207ENST00000485780 EARS2Q5JPH6 523 aaKnown RBP10.63□□□□□ -0.71
SHROOM3-207ENST00000485780 CCDC62Q6P9F0 684 aa10.63□□□□□ -0.71
SHROOM3-207ENST00000485780 MOXD1Q6UVY6 613 aa10.63□□□□□ -0.71
SHROOM3-207ENST00000485780 NIPA1Q7RTP0 329 aa10.63□□□□□ -0.71
SHROOM3-207ENST00000485780 RNF180Q86T96 592 aa10.63□□□□□ -0.71
SHROOM3-207ENST00000485780 FBXO16Q8IX29 292 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms