RNA–Protein interactions for RNA: ENST00000485249.1

KDM4A-205, Transcript of lysine demethylase 4A, humanhuman

TSL 3

Gene KDM4A, Length 852 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-205ENST00000485249 NUCKS1Q9H1E3 243 aaKnown RBP7.06□□□□□ -1.28
KDM4A-205ENST00000485249 RNF41Q9H4P4 317 aaPredicted RBP7.06□□□□□ -1.28
KDM4A-205ENST00000485249 BRD7Q9NPI1 651 aa7.06□□□□□ -1.28
KDM4A-205ENST00000485249 TOMM22Q9NS69 142 aa7.06□□□□□ -1.28
KDM4A-205ENST00000485249 A0A1W2PRG0 241 aa7.05□□□□□ -1.28
KDM4A-205ENST00000485249 IQCA1LA6NCM1 817 aa7.05□□□□□ -1.28
KDM4A-205ENST00000485249 EFSO43281 561 aa7.05□□□□□ -1.28
KDM4A-205ENST00000485249 USP2O75604 605 aaPredicted RBP7.05□□□□□ -1.28
KDM4A-205ENST00000485249 HLA-DOAP06340 250 aa7.05□□□□□ -1.28
KDM4A-205ENST00000485249 P4HBP07237 508 aaKnown RBP7.05□□□□□ -1.28
KDM4A-205ENST00000485249 SNRPBP14678 240 aaKnown RBP7.05□□□□□ -1.28
KDM4A-205ENST00000485249 VEGFAP15692 232 aaPredicted RBP7.05□□□□□ -1.28
KDM4A-205ENST00000485249 GRNP28799 593 aaKnown RBP7.05□□□□□ -1.28
KDM4A-205ENST00000485249 TNNI2P48788 182 aa7.05□□□□□ -1.28
KDM4A-205ENST00000485249 PDE4BQ07343 736 aa7.05□□□□□ -1.28
KDM4A-205ENST00000485249 SEPT2Q15019 361 aa7.05□□□□□ -1.28
KDM4A-205ENST00000485249 TRIP4Q15650 581 aaPredicted RBP7.05□□□□□ -1.28
KDM4A-205ENST00000485249 SLC35G1Q2M3R5 365 aa7.05□□□□□ -1.28
KDM4A-205ENST00000485249 RALYLQ86SE5 291 aaKnown RBP7.05□□□□□ -1.28
KDM4A-205ENST00000485249 ANKS1AQ92625 1134 aa7.05□□□□□ -1.28
KDM4A-205ENST00000485249 ESR2Q92731 530 aa7.05□□□□□ -1.28
KDM4A-205ENST00000485249 CEP95Q96GE4 821 aa7.05□□□□□ -1.28
KDM4A-205ENST00000485249 GMCL1Q96IK5 515 aa7.05□□□□□ -1.28
KDM4A-205ENST00000485249 ZCCHC2Q9C0B9 1178 aaKnown RBP7.05□□□□□ -1.28
KDM4A-205ENST00000485249 CNNM2Q9H8M5 875 aa7.05□□□□□ -1.28
KDM4A-205ENST00000485249 C11orf16Q9NQ32 467 aa7.05□□□□□ -1.28
KDM4A-205ENST00000485249 TCP11L1Q9NUJ3 509 aa7.05□□□□□ -1.28
KDM4A-205ENST00000485249 SWAP70Q9UH65 585 aa7.05□□□□□ -1.28
KDM4A-205ENST00000485249 ZNF112Q9UJU3 913 aa7.05□□□□□ -1.28
KDM4A-205ENST00000485249 KCNMB2Q9Y691 235 aa7.05□□□□□ -1.28
KDM4A-205ENST00000485249 LOC285556D6RIA3 1793 aa7.05□□□□□ -1.28
KDM4A-205ENST00000485249 KLF18A0A0U1RQI7 1052 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 TSPY2A6NKD2 308 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 K7ELQ4 463 aaPredicted RBP7.04□□□□□ -1.28
KDM4A-205ENST00000485249 IFIT3O14879 490 aaKnown RBP7.04□□□□□ -1.28
KDM4A-205ENST00000485249 ATXN7O15265 892 aaPredicted RBP7.04□□□□□ -1.28
KDM4A-205ENST00000485249 CTDNEP1O95476 244 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 GH2P01242 217 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 SLC3A2P08195 630 aaKnown RBP7.04□□□□□ -1.28
KDM4A-205ENST00000485249 HMGB1P09429 215 aaKnown RBP7.04□□□□□ -1.28
KDM4A-205ENST00000485249 PCP11498 1178 aaKnown RBP7.04□□□□□ -1.28
KDM4A-205ENST00000485249 ZNF16P17020 682 aaPredicted RBP7.04□□□□□ -1.28
KDM4A-205ENST00000485249 RXRAP19793 462 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 PDIA3P30101 505 aaKnown RBP7.04□□□□□ -1.28
KDM4A-205ENST00000485249 CDC27P30260 824 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 LIFRP42702 1097 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 SCRN1Q12765 414 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 TROAPQ12815 778 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 TRDNQ13061 729 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 CUL4AQ13619 759 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 TNFAIP1Q13829 316 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 PRKG1Q13976 671 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 CERKLQ49MI3 558 aaPredicted RBP7.04□□□□□ -1.28
KDM4A-205ENST00000485249 TMEM67Q5HYA8 995 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 KIAA1755Q5JYT7 1200 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 APOA5Q6Q788 366 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.04□□□□□ -1.28
KDM4A-205ENST00000485249 KRT26Q7Z3Y9 468 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 SGMS1Q86VZ5 419 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 CRACR2BQ8N4Y2 399 aaPredicted RBP7.04□□□□□ -1.28
KDM4A-205ENST00000485249 TTC16Q8NEE8 873 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.04□□□□□ -1.28
KDM4A-205ENST00000485249 ACER1Q8TDN7 264 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 GIPC2Q8TF65 315 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 DCPSQ96C86 337 aaKnown RBP7.04□□□□□ -1.28
KDM4A-205ENST00000485249 ZNF837Q96EG3 531 aaPredicted RBP7.04□□□□□ -1.28
KDM4A-205ENST00000485249 TMEM87BQ96K49 555 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 TMEM47Q9BQJ4 181 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 MTA3Q9BTC8 594 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.04□□□□□ -1.28
KDM4A-205ENST00000485249 MKNK2Q9HBH9 465 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 NCOA5Q9HCD5 579 aaKnown RBP7.04□□□□□ -1.28
KDM4A-205ENST00000485249 CUEDC1Q9NWM3 386 aaPredicted RBP7.04□□□□□ -1.28
KDM4A-205ENST00000485249 MTMR4Q9NYA4 1195 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 HERC5Q9UII4 1024 aaKnown RBP7.04□□□□□ -1.28
KDM4A-205ENST00000485249 ZBTB21Q9ULJ3 1066 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 ANGEL1Q9UNK9 670 aaKnown RBP7.04□□□□□ -1.28
KDM4A-205ENST00000485249 FNDC3AQ9Y2H6 1198 aaKnown RBP7.04□□□□□ -1.28
KDM4A-205ENST00000485249 USP20Q9Y2K6 914 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 PCDHGC4Q9Y5F7 938 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 PPP2R3BQ9Y5P8 575 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 SMCHD1A6NHR9 2005 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 NID2Q14112 1375 aa7.04□□□□□ -1.28
KDM4A-205ENST00000485249 COL11A1P12107 1806 aaPredicted RBP7.04□□□□□ -1.28
KDM4A-205ENST00000485249 UBE2Q2LH0YL09 131 aa7.03□□□□□ -1.28
KDM4A-205ENST00000485249 PFKFB2O60825 505 aa7.03□□□□□ -1.28
KDM4A-205ENST00000485249 PPFIA3O75145 1194 aa7.03□□□□□ -1.28
KDM4A-205ENST00000485249 TSPY3P0CV98 308 aa7.03□□□□□ -1.28
KDM4A-205ENST00000485249 TSPY8P0CW00 308 aa7.03□□□□□ -1.28
KDM4A-205ENST00000485249 EEF2P13639 858 aaKnown RBP7.03□□□□□ -1.28
KDM4A-205ENST00000485249 DDIT3P35638 169 aa7.03□□□□□ -1.28
KDM4A-205ENST00000485249 CAP2P40123 477 aa7.03□□□□□ -1.28
KDM4A-205ENST00000485249 ECE1P42892 770 aa7.03□□□□□ -1.28
KDM4A-205ENST00000485249 CCT2P78371 535 aaKnown RBP7.03□□□□□ -1.28
KDM4A-205ENST00000485249 STK3Q13188 491 aa7.03□□□□□ -1.28
KDM4A-205ENST00000485249 LAMC2Q13753 1193 aa7.03□□□□□ -1.28
KDM4A-205ENST00000485249 WTAPQ15007 396 aa7.03□□□□□ -1.28
KDM4A-205ENST00000485249 NTRK3Q16288 839 aa7.03□□□□□ -1.28
KDM4A-205ENST00000485249 ABCB5Q2M3G0 1257 aa7.03□□□□□ -1.28
KDM4A-205ENST00000485249 PDE12Q6L8Q7 609 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms