RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 KCNMB3Q9NPA1 279 aa23.15■■□□□ 1.3
VCPKMT-203ENST00000484763 IGLV3-22A0A075B6J6 115 aa23.15■■□□□ 1.3
VCPKMT-203ENST00000484763 A0A1B0GVL5 298 aa23.15■■□□□ 1.3
VCPKMT-203ENST00000484763 SETQ01105 290 aaPredicted RBP23.15■■□□□ 1.3
VCPKMT-203ENST00000484763 FAM160A1Q05DH4 1040 aa23.15■■□□□ 1.3
VCPKMT-203ENST00000484763 KCTD2Q14681 263 aa23.15■■□□□ 1.3
VCPKMT-203ENST00000484763 CAVIN1Q6NZI2 390 aaKnown RBP23.15■■□□□ 1.3
VCPKMT-203ENST00000484763 DNERQ8NFT8 737 aa23.15■■□□□ 1.3
VCPKMT-203ENST00000484763 CAPNS2Q96L46 248 aa23.15■■□□□ 1.3
VCPKMT-203ENST00000484763 ZIC5Q96T25 663 aa23.15■■□□□ 1.3
VCPKMT-203ENST00000484763 MMP19Q99542 508 aa23.15■■□□□ 1.3
VCPKMT-203ENST00000484763 R3HDMLQ9H3Y0 253 aa23.15■■□□□ 1.3
VCPKMT-203ENST00000484763 EFCC1Q9HA90 598 aa23.15■■□□□ 1.3
VCPKMT-203ENST00000484763 TBX3O15119 743 aa23.14■■□□□ 1.29
VCPKMT-203ENST00000484763 MARCH6O60337 910 aa23.14■■□□□ 1.29
VCPKMT-203ENST00000484763 FCER1AP12319 257 aa23.14■■□□□ 1.29
VCPKMT-203ENST00000484763 PFKFB1P16118 471 aa23.14■■□□□ 1.29
VCPKMT-203ENST00000484763 SPECC1Q5M775 1068 aa23.14■■□□□ 1.29
VCPKMT-203ENST00000484763 XRRA1Q6P2D8 792 aa23.14■■□□□ 1.29
VCPKMT-203ENST00000484763 SLFN12Q8IYM2 578 aa23.14■■□□□ 1.29
VCPKMT-203ENST00000484763 FAM13BQ9NYF5 915 aa23.14■■□□□ 1.29
VCPKMT-203ENST00000484763 FAM237AA0A1B0GTK4 181 aa23.13■■□□□ 1.29
VCPKMT-203ENST00000484763 POTEB2H3BUK9 544 aa23.13■■□□□ 1.29
VCPKMT-203ENST00000484763 CCND2P30279 289 aa23.13■■□□□ 1.29
VCPKMT-203ENST00000484763 TXKP42681 527 aa23.13■■□□□ 1.29
VCPKMT-203ENST00000484763 TMEM266Q2M3C6 531 aa23.13■■□□□ 1.29
VCPKMT-203ENST00000484763 CYP2W1Q8TAV3 490 aa23.13■■□□□ 1.29
VCPKMT-203ENST00000484763 ETNPPLQ8TBG4 499 aa23.13■■□□□ 1.29
VCPKMT-203ENST00000484763 HAS1Q92839 578 aa23.13■■□□□ 1.29
VCPKMT-203ENST00000484763 SYAP1Q96A49 352 aaPredicted RBP23.13■■□□□ 1.29
VCPKMT-203ENST00000484763 ZFYVE28Q9HCC9 887 aa23.13■■□□□ 1.29
VCPKMT-203ENST00000484763 DACT1Q9NYF0 836 aa23.13■■□□□ 1.29
VCPKMT-203ENST00000484763 ZNFX1Q9P2E3 1918 aaKnown RBP23.13■■□□□ 1.29
VCPKMT-203ENST00000484763 NR1I2O75469 434 aa23.12■■□□□ 1.29
VCPKMT-203ENST00000484763 BCRP11274 1271 aa23.12■■□□□ 1.29
VCPKMT-203ENST00000484763 FXR2P51116 673 aaKnown RBP eCLIP23.12■■□□□ 1.29
VCPKMT-203ENST00000484763 NDUFA8P51970 172 aa23.12■■□□□ 1.29
VCPKMT-203ENST00000484763 PLA2G4DQ86XP0 818 aa23.12■■□□□ 1.29
VCPKMT-203ENST00000484763 ENGASEQ8NFI3 743 aa23.12■■□□□ 1.29
VCPKMT-203ENST00000484763 MXRA8Q9BRK3 442 aa23.12■■□□□ 1.29
VCPKMT-203ENST00000484763 ADD3Q9UEY8 706 aaKnown RBP23.12■■□□□ 1.29
VCPKMT-203ENST00000484763 CPA4Q9UI42 421 aa23.12■■□□□ 1.29
VCPKMT-203ENST00000484763 HPSEQ9Y251 543 aa23.12■■□□□ 1.29
VCPKMT-203ENST00000484763 TLR2O60603 784 aa23.12■■□□□ 1.29
VCPKMT-203ENST00000484763 NR3C2P08235 984 aa23.12■■□□□ 1.29
VCPKMT-203ENST00000484763 MYCLP12524 364 aaPredicted RBP23.12■■□□□ 1.29
VCPKMT-203ENST00000484763 MRPS9P82933 396 aaKnown RBP23.12■■□□□ 1.29
VCPKMT-203ENST00000484763 CNTN2Q02246 1040 aa23.12■■□□□ 1.29
VCPKMT-203ENST00000484763 NIPA1Q7RTP0 329 aa23.12■■□□□ 1.29
VCPKMT-203ENST00000484763 REM2Q8IYK8 340 aaPredicted RBP23.12■■□□□ 1.29
VCPKMT-203ENST00000484763 FAM133AQ8N9E0 248 aa23.12■■□□□ 1.29
VCPKMT-203ENST00000484763 SYMPKQ92797 1274 aaKnown RBP23.12■■□□□ 1.29
VCPKMT-203ENST00000484763 AK8Q96MA6 479 aa23.12■■□□□ 1.29
VCPKMT-203ENST00000484763 DDX19AQ9NUU7 478 aaKnown RBP23.12■■□□□ 1.29
VCPKMT-203ENST00000484763 MEIS1O00470 390 aa23.11■■□□□ 1.29
VCPKMT-203ENST00000484763 TECP42680 631 aa23.11■■□□□ 1.29
VCPKMT-203ENST00000484763 SNW1Q13573 536 aaKnown RBP23.11■■□□□ 1.29
VCPKMT-203ENST00000484763 FMR1NBQ8N0W7 255 aaPredicted RBP23.11■■□□□ 1.29
VCPKMT-203ENST00000484763 FAM20AQ96MK3 541 aa23.11■■□□□ 1.29
VCPKMT-203ENST00000484763 IWS1Q96ST2 819 aa23.11■■□□□ 1.29
VCPKMT-203ENST00000484763 RAB34Q9BZG1 259 aa23.11■■□□□ 1.29
VCPKMT-203ENST00000484763 TTC12Q9H892 705 aaPredicted RBP23.11■■□□□ 1.29
VCPKMT-203ENST00000484763 TMEM63CQ9P1W3 806 aa23.11■■□□□ 1.29
VCPKMT-203ENST00000484763 UBIAD1Q9Y5Z9 338 aa23.11■■□□□ 1.29
VCPKMT-203ENST00000484763 MSH4O15457 936 aa23.1■■□□□ 1.29
VCPKMT-203ENST00000484763 AOC2O75106 756 aa23.1■■□□□ 1.29
VCPKMT-203ENST00000484763 ALDH1A1P00352 501 aa23.1■■□□□ 1.29
VCPKMT-203ENST00000484763 MAPK4P31152 587 aa23.1■■□□□ 1.29
VCPKMT-203ENST00000484763 ALDH5A1P51649 535 aaPredicted RBP23.1■■□□□ 1.29
VCPKMT-203ENST00000484763 VSIG10LQ86VR7 867 aa23.1■■□□□ 1.29
VCPKMT-203ENST00000484763 IGSF22Q8N9C0 903 aa23.1■■□□□ 1.29
VCPKMT-203ENST00000484763 EPSTI1Q96J88 318 aa23.1■■□□□ 1.29
VCPKMT-203ENST00000484763 KCNH3Q9ULD8 1083 aa23.1■■□□□ 1.29
VCPKMT-203ENST00000484763 IVNS1ABPQ9Y6Y0 642 aa23.1■■□□□ 1.29
VCPKMT-203ENST00000484763 DNAJC25-GNG10A0A024R161 153 aa23.1■■□□□ 1.29
VCPKMT-203ENST00000484763 ITGB5P18084 799 aa23.1■■□□□ 1.29
VCPKMT-203ENST00000484763 SYKP43405 635 aa23.1■■□□□ 1.29
VCPKMT-203ENST00000484763 ABRAQ8N0Z2 381 aa23.1■■□□□ 1.29
VCPKMT-203ENST00000484763 ZFP91Q96JP5 570 aaPredicted RBP23.1■■□□□ 1.29
VCPKMT-203ENST00000484763 PCDHA12Q9UN75 941 aa23.1■■□□□ 1.29
VCPKMT-203ENST00000484763 LRRC37A2A6NM11 1700 aa23.09■■□□□ 1.29
VCPKMT-203ENST00000484763 ASTN1O14525 1302 aa23.09■■□□□ 1.29
VCPKMT-203ENST00000484763 STRNO43815 780 aa23.09■■□□□ 1.29
VCPKMT-203ENST00000484763 KINO60870 393 aaKnown RBP23.09■■□□□ 1.29
VCPKMT-203ENST00000484763 STAM2O75886 525 aa23.09■■□□□ 1.29
VCPKMT-203ENST00000484763 TXLNAP40222 546 aa23.09■■□□□ 1.29
VCPKMT-203ENST00000484763 CRHR2Q13324 411 aa23.09■■□□□ 1.29
VCPKMT-203ENST00000484763 CCDC183Q5T5S1 534 aa23.09■■□□□ 1.29
VCPKMT-203ENST00000484763 C17orf99Q6UX52 265 aa23.09■■□□□ 1.29
VCPKMT-203ENST00000484763 USP49Q70CQ1 688 aa23.09■■□□□ 1.29
VCPKMT-203ENST00000484763 JADE2Q9NQC1 790 aa23.09■■□□□ 1.29
VCPKMT-203ENST00000484763 ZNF236Q9UL36 1845 aa23.09■■□□□ 1.29
VCPKMT-203ENST00000484763 PLXNA1Q9UIW2 1896 aa23.08■■□□□ 1.29
VCPKMT-203ENST00000484763 SOWAHBA6NEL2 793 aa23.08■■□□□ 1.29
VCPKMT-203ENST00000484763 CA12O43570 354 aa23.08■■□□□ 1.29
VCPKMT-203ENST00000484763 PGK2P07205 417 aa23.08■■□□□ 1.29
VCPKMT-203ENST00000484763 PDIA5Q14554 519 aa23.08■■□□□ 1.29
VCPKMT-203ENST00000484763 GPR142Q7Z601 462 aa23.08■■□□□ 1.29
VCPKMT-203ENST00000484763 GJA10Q969M2 543 aa23.08■■□□□ 1.29
VCPKMT-203ENST00000484763 MPHOSPH6Q99547 160 aaKnown RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms