RNA–Protein interactions for RNA: ENST00000483859.6

SENP6-208, Transcript of SUMO specific peptidase 6, humanhuman

TSL 3

Gene SENP6, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-208ENST00000483859 ZNF214Q9UL59 606 aaPredicted RBP5.05□□□□□ -1.6
SENP6-208ENST00000483859 MROH6A6NGR9 719 aa5.04□□□□□ -1.6
SENP6-208ENST00000483859 AXDND1Q5T1B0 1012 aaPredicted RBP5.04□□□□□ -1.6
SENP6-208ENST00000483859 DCAF15Q66K64 600 aa5.04□□□□□ -1.6
SENP6-208ENST00000483859 GIMAP6Q6P9H5 292 aa5.04□□□□□ -1.6
SENP6-208ENST00000483859 VHLLQ6RSH7 139 aa5.04□□□□□ -1.6
SENP6-208ENST00000483859 FAM178BQ8IXR5 827 aa5.04□□□□□ -1.6
SENP6-208ENST00000483859 WWC2-AS2Q96NR7 200 aa5.04□□□□□ -1.6
SENP6-208ENST00000483859 GORASP1Q9BQQ3 440 aa5.04□□□□□ -1.6
SENP6-208ENST00000483859 SLC12A9Q9BXP2 914 aa5.04□□□□□ -1.6
SENP6-208ENST00000483859 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.04□□□□□ -1.6
SENP6-208ENST00000483859 ZSWIM4Q9H7M6 989 aa5.04□□□□□ -1.6
SENP6-208ENST00000483859 SNTG2Q9NY99 539 aa5.04□□□□□ -1.6
SENP6-208ENST00000483859 SUCOQ9UBS9 1254 aaKnown RBP5.04□□□□□ -1.6
SENP6-208ENST00000483859 MSRB2Q9Y3D2 182 aa5.04□□□□□ -1.6
SENP6-208ENST00000483859 PCSK5Q92824 1860 aa5.04□□□□□ -1.6
SENP6-208ENST00000483859 CBFA2T2O43439 604 aa5.03□□□□□ -1.6
SENP6-208ENST00000483859 DDAH1O94760 285 aa5.03□□□□□ -1.6
SENP6-208ENST00000483859 PMS1P54277 932 aaKnown RBP5.03□□□□□ -1.6
SENP6-208ENST00000483859 TGFB2P61812 414 aa5.03□□□□□ -1.6
SENP6-208ENST00000483859 SMN1Q16637 294 aaKnown RBP5.03□□□□□ -1.6
SENP6-208ENST00000483859 HLA-DQA1Q5Y7H0 255 aa5.03□□□□□ -1.6
SENP6-208ENST00000483859 KIAA1211LQ6NV74 962 aa5.03□□□□□ -1.6
SENP6-208ENST00000483859 TRIM55Q9BYV6 548 aa5.03□□□□□ -1.6
SENP6-208ENST00000483859 DEF6Q9H4E7 631 aa5.03□□□□□ -1.6
SENP6-208ENST00000483859 KANSL2Q9H9L4 492 aa5.03□□□□□ -1.6
SENP6-208ENST00000483859 SMARCA5O60264 1052 aaPredicted RBP5.02□□□□□ -1.61
SENP6-208ENST00000483859 B4GALT3O60512 393 aa5.02□□□□□ -1.61
SENP6-208ENST00000483859 CLEC3AO75596 197 aa5.02□□□□□ -1.61
SENP6-208ENST00000483859 GLI4P10075 376 aa5.02□□□□□ -1.61
SENP6-208ENST00000483859 R3HDM1Q15032 1099 aaKnown RBP5.02□□□□□ -1.61
SENP6-208ENST00000483859 GNPTABQ3T906 1256 aa5.02□□□□□ -1.61
SENP6-208ENST00000483859 SPATC1Q76KD6 591 aa5.02□□□□□ -1.61
SENP6-208ENST00000483859 ZNF513Q8N8E2 541 aaPredicted RBP5.02□□□□□ -1.61
SENP6-208ENST00000483859 TXNDC5Q8NBS9 432 aaKnown RBP5.02□□□□□ -1.61
SENP6-208ENST00000483859 CHFRQ96EP1 664 aa5.02□□□□□ -1.61
SENP6-208ENST00000483859 DEPDC7Q96QD5 511 aa5.02□□□□□ -1.61
SENP6-208ENST00000483859 MKRN2Q9H000 416 aaKnown RBP5.02□□□□□ -1.61
SENP6-208ENST00000483859 APEX2Q9UBZ4 518 aa5.02□□□□□ -1.61
SENP6-208ENST00000483859 CDK11AQ9UQ88 783 aaPredicted RBP5.02□□□□□ -1.61
SENP6-208ENST00000483859 H0Y8X5 98 aa5.01□□□□□ -1.61
SENP6-208ENST00000483859 DDX3XO00571 662 aaKnown RBP eCLIP5.01□□□□□ -1.61
SENP6-208ENST00000483859 DIAPH1O60610 1272 aaKnown RBP5.01□□□□□ -1.61
SENP6-208ENST00000483859 EPHX1P07099 455 aa5.01□□□□□ -1.61
SENP6-208ENST00000483859 C8BP07358 591 aa5.01□□□□□ -1.61
SENP6-208ENST00000483859 CCNFP41002 786 aa5.01□□□□□ -1.61
SENP6-208ENST00000483859 SLC7A5Q01650 507 aa5.01□□□□□ -1.61
SENP6-208ENST00000483859 CACNB2Q08289 660 aaPredicted RBP5.01□□□□□ -1.61
SENP6-208ENST00000483859 KIAA2012Q0VF49 1180 aa5.01□□□□□ -1.61
SENP6-208ENST00000483859 FXNQ16595 210 aa5.01□□□□□ -1.61
SENP6-208ENST00000483859 NBPF6Q5VWK0 638 aa5.01□□□□□ -1.61
SENP6-208ENST00000483859 JAZF1Q86VZ6 243 aa5.01□□□□□ -1.61
SENP6-208ENST00000483859 FAM26EQ8N5C1 309 aa5.01□□□□□ -1.61
SENP6-208ENST00000483859 IGDCC4Q8TDY8 1250 aa5.01□□□□□ -1.61
SENP6-208ENST00000483859 NBPF4Q96M43 638 aa5.01□□□□□ -1.61
SENP6-208ENST00000483859 FGD4Q96M96 766 aa5.01□□□□□ -1.61
SENP6-208ENST00000483859 SRPK1Q96SB4 655 aaKnown RBP5.01□□□□□ -1.61
SENP6-208ENST00000483859 IKZF4Q9H2S9 585 aa5.01□□□□□ -1.61
SENP6-208ENST00000483859 PHAXQ9H814 394 aaKnown RBP5.01□□□□□ -1.61
SENP6-208ENST00000483859 SIRPGQ9P1W8 387 aa5.01□□□□□ -1.61
SENP6-208ENST00000483859 SIT1Q9Y3P8 196 aa5.01□□□□□ -1.61
SENP6-208ENST00000483859 R3HCC1Q9Y3T6 440 aaKnown RBP5.01□□□□□ -1.61
SENP6-208ENST00000483859 ZNF451Q9Y4E5 1061 aa5.01□□□□□ -1.61
SENP6-208ENST00000483859 LAMTOR5O43504 91 aa5□□□□□ -1.61
SENP6-208ENST00000483859 THBS2P35442 1172 aa5□□□□□ -1.61
SENP6-208ENST00000483859 SLC10A6Q3KNW5 377 aa5□□□□□ -1.61
SENP6-208ENST00000483859 CCDC144CPQ8IYA2 1237 aa5□□□□□ -1.61
SENP6-208ENST00000483859 LINC00482Q8N8I6 264 aa5□□□□□ -1.61
SENP6-208ENST00000483859 HAUS7Q99871 368 aa5□□□□□ -1.61
SENP6-208ENST00000483859 KLHL25Q9H0H3 589 aa5□□□□□ -1.61
SENP6-208ENST00000483859 PFDN2Q9UHV9 154 aa5□□□□□ -1.61
SENP6-208ENST00000483859 RWDD3Q9Y3V2 267 aa5□□□□□ -1.61
SENP6-208ENST00000483859 PCDHB12Q9Y5F1 795 aa5□□□□□ -1.61
SENP6-208ENST00000483859 NPEPPSL1A6NEC2 478 aa4.99□□□□□ -1.61
SENP6-208ENST00000483859 FGF10O15520 208 aaPredicted RBP4.99□□□□□ -1.61
SENP6-208ENST00000483859 TBX1O43435 398 aa4.99□□□□□ -1.61
SENP6-208ENST00000483859 SUSD5O60279 629 aa4.99□□□□□ -1.61
SENP6-208ENST00000483859 RPL13P26373 211 aaKnown RBP4.99□□□□□ -1.61
SENP6-208ENST00000483859 INHBEP58166 350 aa4.99□□□□□ -1.61
SENP6-208ENST00000483859 NANOS3P60323 173 aaKnown RBP4.99□□□□□ -1.61
SENP6-208ENST00000483859 AUHQ13825 339 aaKnown RBP4.99□□□□□ -1.61
SENP6-208ENST00000483859 BORAQ6PGQ7 559 aa4.99□□□□□ -1.61
SENP6-208ENST00000483859 LILRB2Q8N423 598 aa4.99□□□□□ -1.61
SENP6-208ENST00000483859 ADCY4Q8NFM4 1077 aa4.99□□□□□ -1.61
SENP6-208ENST00000483859 BRF1Q92994 677 aa4.99□□□□□ -1.61
SENP6-208ENST00000483859 CDK5RAP1Q96SZ6 601 aaKnown RBP4.99□□□□□ -1.61
SENP6-208ENST00000483859 DNAJC7Q99615 494 aa4.99□□□□□ -1.61
SENP6-208ENST00000483859 C11orf84Q9BUA3 381 aaPredicted RBP4.99□□□□□ -1.61
SENP6-208ENST00000483859 DSCC1Q9BVC3 393 aa4.99□□□□□ -1.61
SENP6-208ENST00000483859 SLC12A7Q9Y666 1083 aa4.99□□□□□ -1.61
SENP6-208ENST00000483859 U2SURPO15042 1029 aaKnown RBP4.98□□□□□ -1.61
SENP6-208ENST00000483859 PDPK1O15530 556 aa4.98□□□□□ -1.61
SENP6-208ENST00000483859 PPP1R11O60927 126 aaPredicted RBP4.98□□□□□ -1.61
SENP6-208ENST00000483859 ENDOUP21128 410 aaKnown RBP4.98□□□□□ -1.61
SENP6-208ENST00000483859 C7orf61Q8IZ16 206 aa4.98□□□□□ -1.61
SENP6-208ENST00000483859 DNERQ8NFT8 737 aa4.98□□□□□ -1.61
SENP6-208ENST00000483859 TSPAN17Q96FV3 270 aa4.98□□□□□ -1.61
SENP6-208ENST00000483859 NAF1Q96HR8 494 aaKnown RBP4.98□□□□□ -1.61
SENP6-208ENST00000483859 DHRS1Q96LJ7 313 aa4.98□□□□□ -1.61
SENP6-208ENST00000483859 CCDC113Q9H0I3 377 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms