RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 MRPS9P82933 396 aaKnown RBP20.35■□□□□ 0.85
CPNE1-224ENST00000483359 ARHGAP4P98171 946 aa20.35■□□□□ 0.85
CPNE1-224ENST00000483359 SEPT14Q6ZU15 432 aa20.35■□□□□ 0.85
CPNE1-224ENST00000483359 TEX2Q8IWB9 1127 aa20.35■□□□□ 0.85
CPNE1-224ENST00000483359 TBCKQ8TEA7 893 aa20.35■□□□□ 0.85
CPNE1-224ENST00000483359 KATNBL1Q9H079 304 aa20.35■□□□□ 0.85
CPNE1-224ENST00000483359 PDGFCQ9NRA1 345 aa20.35■□□□□ 0.85
CPNE1-224ENST00000483359 RBM19Q9Y4C8 960 aaKnown RBP20.35■□□□□ 0.85
CPNE1-224ENST00000483359 MYH7BA7E2Y1 1941 aa20.35■□□□□ 0.85
CPNE1-224ENST00000483359 SYT1P21579 422 aa20.35■□□□□ 0.85
CPNE1-224ENST00000483359 NONOQ15233 471 aaKnown RBP eCLIP20.35■□□□□ 0.85
CPNE1-224ENST00000483359 INF2Q27J81 1249 aa20.35■□□□□ 0.85
CPNE1-224ENST00000483359 MAP3K21Q5TCX8 1036 aa20.35■□□□□ 0.85
CPNE1-224ENST00000483359 ANO1Q5XXA6 986 aa20.35■□□□□ 0.85
CPNE1-224ENST00000483359 PCNX4Q63HM2 1172 aa20.35■□□□□ 0.85
CPNE1-224ENST00000483359 KRT25Q7Z3Z0 450 aa20.35■□□□□ 0.85
CPNE1-224ENST00000483359 VSIG10LQ86VR7 867 aa20.35■□□□□ 0.85
CPNE1-224ENST00000483359 LOC102724159A0A0B4J2E5 919 aa20.34■□□□□ 0.85
CPNE1-224ENST00000483359 ZNF865P0CJ78 1059 aaPredicted RBP20.34■□□□□ 0.85
CPNE1-224ENST00000483359 PWP2Q15269 919 aaKnown RBP20.34■□□□□ 0.85
CPNE1-224ENST00000483359 MCTP2Q6DN12 878 aa20.34■□□□□ 0.85
CPNE1-224ENST00000483359 TNFRSF25Q93038 417 aa20.34■□□□□ 0.85
CPNE1-224ENST00000483359 LENG1Q96BZ8 264 aaPredicted RBP20.34■□□□□ 0.85
CPNE1-224ENST00000483359 ZNF333Q96JL9 665 aa20.34■□□□□ 0.85
CPNE1-224ENST00000483359 UNC93B1Q9H1C4 597 aa20.34■□□□□ 0.85
CPNE1-224ENST00000483359 PDCP20941 246 aa20.34■□□□□ 0.85
CPNE1-224ENST00000483359 ADCYAP1R1P41586 468 aa20.34■□□□□ 0.85
CPNE1-224ENST00000483359 HMX1Q9NP08 348 aaPredicted RBP20.34■□□□□ 0.85
CPNE1-224ENST00000483359 VTA1Q9NP79 307 aa20.34■□□□□ 0.85
CPNE1-224ENST00000483359 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.33■□□□□ 0.84
CPNE1-224ENST00000483359 EIF3JO75822 258 aaKnown RBP20.33■□□□□ 0.84
CPNE1-224ENST00000483359 RGS20O76081 388 aa20.33■□□□□ 0.84
CPNE1-224ENST00000483359 PTGS1P23219 599 aa20.33■□□□□ 0.84
CPNE1-224ENST00000483359 ZNF76P36508 570 aa20.33■□□□□ 0.84
CPNE1-224ENST00000483359 CCDC144BQ3MJ40 725 aa20.33■□□□□ 0.84
CPNE1-224ENST00000483359 TMEM63BQ5T3F8 832 aa20.33■□□□□ 0.84
CPNE1-224ENST00000483359 ARMC5Q96C12 935 aa20.33■□□□□ 0.84
CPNE1-224ENST00000483359 TAPT1Q6NXT6 567 aa20.32■□□□□ 0.84
CPNE1-224ENST00000483359 CYP2W1Q8TAV3 490 aa20.32■□□□□ 0.84
CPNE1-224ENST00000483359 RNF208Q9H0X6 261 aa20.32■□□□□ 0.84
CPNE1-224ENST00000483359 FOXP1Q9H334 677 aaPredicted RBP20.32■□□□□ 0.84
CPNE1-224ENST00000483359 KIAA1217Q5T5P2 1943 aa20.32■□□□□ 0.84
CPNE1-224ENST00000483359 ADCY6O43306 1168 aa20.32■□□□□ 0.84
CPNE1-224ENST00000483359 CCL5P13501 91 aa20.32■□□□□ 0.84
CPNE1-224ENST00000483359 FERMT3Q86UX7 667 aa20.32■□□□□ 0.84
CPNE1-224ENST00000483359 CRYGNQ8WXF5 182 aa20.32■□□□□ 0.84
CPNE1-224ENST00000483359 WDR11Q9BZH6 1224 aa20.32■□□□□ 0.84
CPNE1-224ENST00000483359 FAM86B1E9PN63 330 aa20.31■□□□□ 0.84
CPNE1-224ENST00000483359 FAM86B2P0C5J1 330 aa20.31■□□□□ 0.84
CPNE1-224ENST00000483359 ITGB5P18084 799 aa20.31■□□□□ 0.84
CPNE1-224ENST00000483359 LETM2Q2VYF4 491 aa20.31■□□□□ 0.84
CPNE1-224ENST00000483359 GJC2Q5T442 439 aaPredicted RBP20.31■□□□□ 0.84
CPNE1-224ENST00000483359 NOSTRINQ8IVI9 506 aa20.31■□□□□ 0.84
CPNE1-224ENST00000483359 UIMC1Q96RL1 719 aa20.31■□□□□ 0.84
CPNE1-224ENST00000483359 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.31■□□□□ 0.846e-9■□□□□ 10.4
CPNE1-224ENST00000483359 PKD2L1Q9P0L9 805 aa20.31■□□□□ 0.84
CPNE1-224ENST00000483359 MRVI1Q9Y6F6 885 aa20.31■□□□□ 0.84
CPNE1-224ENST00000483359 STX6O43752 255 aa20.3■□□□□ 0.84
CPNE1-224ENST00000483359 SORBS3O60504 671 aa20.3■□□□□ 0.84
CPNE1-224ENST00000483359 ARIH2O95376 493 aa20.3■□□□□ 0.84
CPNE1-224ENST00000483359 ATP2B1P20020 1258 aa20.3■□□□□ 0.84
CPNE1-224ENST00000483359 FOXD4L5Q5VV16 416 aaPredicted RBP20.3■□□□□ 0.84
CPNE1-224ENST00000483359 FOXD4L4Q8WXT5 416 aaPredicted RBP20.3■□□□□ 0.84
CPNE1-224ENST00000483359 INPP4AQ96PE3 977 aaPredicted RBP20.3■□□□□ 0.84
CPNE1-224ENST00000483359 NRBP1Q9UHY1 535 aa20.3■□□□□ 0.84
CPNE1-224ENST00000483359 SEPT4O43236 478 aa20.3■□□□□ 0.84
CPNE1-224ENST00000483359 EDIL3O43854 480 aa20.3■□□□□ 0.84
CPNE1-224ENST00000483359 TDP2O95551 362 aa20.3■□□□□ 0.84
CPNE1-224ENST00000483359 AKR1A1P14550 325 aa20.3■□□□□ 0.84
CPNE1-224ENST00000483359 GNPTABQ3T906 1256 aa20.3■□□□□ 0.84
CPNE1-224ENST00000483359 XRRA1Q6P2D8 792 aa20.3■□□□□ 0.84
CPNE1-224ENST00000483359 NEK8Q86SG6 692 aa20.3■□□□□ 0.84
CPNE1-224ENST00000483359 DAXXQ9UER7 740 aaPredicted RBP20.3■□□□□ 0.84
CPNE1-224ENST00000483359 U2AF2P26368 475 aaKnown RBP eCLIP20.29■□□□□ 0.849e-27■■■■□ 22.3
CPNE1-224ENST00000483359 MTMR1Q13613 665 aa20.29■□□□□ 0.84
CPNE1-224ENST00000483359 PKP1Q13835 747 aa20.29■□□□□ 0.84
CPNE1-224ENST00000483359 LY6KQ17RY6 165 aa20.29■□□□□ 0.84
CPNE1-224ENST00000483359 CEP55Q53EZ4 464 aa20.29■□□□□ 0.84
CPNE1-224ENST00000483359 SCFD2Q8WU76 684 aa20.29■□□□□ 0.84
CPNE1-224ENST00000483359 MXRA8Q9BRK3 442 aa20.29■□□□□ 0.84
CPNE1-224ENST00000483359 FAM184BQ9ULE4 1060 aa20.29■□□□□ 0.84
CPNE1-224ENST00000483359 MTMR6Q9Y217 621 aa20.29■□□□□ 0.84
CPNE1-224ENST00000483359 UBIAD1Q9Y5Z9 338 aa20.29■□□□□ 0.84
CPNE1-224ENST00000483359 WNT7AO00755 349 aa20.28■□□□□ 0.84
CPNE1-224ENST00000483359 CCNT1O60563 726 aaKnown RBP20.28■□□□□ 0.84
CPNE1-224ENST00000483359 STAM2O75886 525 aa20.28■□□□□ 0.84
CPNE1-224ENST00000483359 CYP3A4P08684 503 aa20.28■□□□□ 0.84
CPNE1-224ENST00000483359 TXNP10599 105 aaKnown RBP20.28■□□□□ 0.84
CPNE1-224ENST00000483359 SMPD1P17405 629 aa20.28■□□□□ 0.84
CPNE1-224ENST00000483359 TNFAIP2Q03169 654 aa20.28■□□□□ 0.84
CPNE1-224ENST00000483359 PRR16Q569H4 304 aa20.28■□□□□ 0.84
CPNE1-224ENST00000483359 NLRX1Q86UT6 975 aa20.28■□□□□ 0.84
CPNE1-224ENST00000483359 COPS5Q92905 334 aa20.28■□□□□ 0.84
CPNE1-224ENST00000483359 DEFB118Q96PH6 123 aa20.28■□□□□ 0.84
CPNE1-224ENST00000483359 DDX20Q9UHI6 824 aaKnown RBP20.28■□□□□ 0.84
CPNE1-224ENST00000483359 SEMA3FQ13275 785 aa20.28■□□□□ 0.84
CPNE1-224ENST00000483359 TTLL4Q14679 1199 aa20.28■□□□□ 0.84
CPNE1-224ENST00000483359 TNS4Q8IZW8 715 aa20.28■□□□□ 0.84
CPNE1-224ENST00000483359 JADE2Q9NQC1 790 aa20.28■□□□□ 0.84
CPNE1-224ENST00000483359 FIBPO43427 364 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms