RNA–Protein interactions for RNA: ENST00000483326.1

LTN1-205, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 1,753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-205ENST00000483326 KRT72Q14CN4 511 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 LRRC14Q15048 493 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 SAFBQ15424 915 aaKnown RBP eCLIP4.91□□□□□ -1.62
LTN1-205ENST00000483326 SCARA3Q6AZY7 606 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 LLGL2Q6P1M3 1020 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 PKN3Q6P5Z2 889 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 ARHGAP27Q6ZUM4 889 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 TOGARAM2Q6ZUX3 1019 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 ZNF354CQ86Y25 554 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.91□□□□□ -1.62
LTN1-205ENST00000483326 IFNL2Q8IZJ0 200 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 GRIN3AQ8TCU5 1115 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 TTC17Q96AE7 1141 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 NEUROD6Q96NK8 337 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 SELENOOQ9BVL4 669 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 TRIM8Q9BZR9 551 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 TCF7L1Q9HCS4 588 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 PLCB1Q9NQ66 1216 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 IP6K2Q9UHH9 426 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 RCAN3Q9UKA8 241 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 PNMA8BQ9ULN7 279 aaPredicted RBP4.91□□□□□ -1.62
LTN1-205ENST00000483326 CYP8B1Q9UNU6 501 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 LUC7L2Q9Y383 392 aaKnown RBP4.91□□□□□ -1.62
LTN1-205ENST00000483326 SYNJ2O15056 1496 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 DHX57Q6P158 1386 aaKnown RBP4.91□□□□□ -1.62
LTN1-205ENST00000483326 SYNJ1O43426 1573 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 TRBV23-1A0A0A0MS06 115 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 TRAV20A0A0B4J274 112 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 KLRG2A4D1S0 409 aaPredicted RBP4.91□□□□□ -1.62
LTN1-205ENST00000483326 FAM83GA6ND36 823 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 PRRT4C9JH25 899 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 EPB41L2O43491 1005 aaKnown RBP4.91□□□□□ -1.62
LTN1-205ENST00000483326 CCDC172P0C7W6 258 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 ITGB5P18084 799 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 HALP42357 657 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 SARSP49591 514 aaKnown RBP4.91□□□□□ -1.62
LTN1-205ENST00000483326 GTF2A1P52655 376 aaPredicted RBP4.91□□□□□ -1.62
LTN1-205ENST00000483326 TMPRSS15P98073 1019 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 MAP2K1Q02750 393 aaPredicted RBP4.91□□□□□ -1.62
LTN1-205ENST00000483326 RPL6Q02878 288 aaKnown RBP4.91□□□□□ -1.62
LTN1-205ENST00000483326 ZNF252P-AS1Q0IIN9 211 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 GBX1Q14549 363 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 SKOR2Q2VWA4 1001 aaPredicted RBP4.91□□□□□ -1.62
LTN1-205ENST00000483326 COBLL1Q53SF7 1204 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 FAM209AQ5JX71 171 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 MPRIPQ6WCQ1 1025 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 SCUBE1Q8IWY4 988 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 PDCL2Q8N4E4 241 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 TMEM40Q8WWA1 233 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 GJA10Q969M2 543 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 VAV3Q9UKW4 847 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 TPX2Q9ULW0 747 aaKnown RBP4.91□□□□□ -1.62
LTN1-205ENST00000483326 SNAPC4Q5SXM2 1469 aa4.91□□□□□ -1.62
LTN1-205ENST00000483326 SMG6Q86US8 1419 aaKnown RBP4.9□□□□□ -1.62
LTN1-205ENST00000483326 RNF123Q5XPI4 1314 aa4.9□□□□□ -1.62
LTN1-205ENST00000483326 CHD1O14646 1710 aa4.9□□□□□ -1.62
LTN1-205ENST00000483326 BTBD11A6QL63 1104 aa4.9□□□□□ -1.63
LTN1-205ENST00000483326 GOLGA6L6A8MZA4 724 aa4.9□□□□□ -1.63
LTN1-205ENST00000483326 BIN1O00499 593 aa4.9□□□□□ -1.63
LTN1-205ENST00000483326 ERC2O15083 957 aa4.9□□□□□ -1.63
LTN1-205ENST00000483326 ZEB2O60315 1214 aa4.9□□□□□ -1.63
LTN1-205ENST00000483326 DNAJC8O75937 253 aaPredicted RBP4.9□□□□□ -1.63
LTN1-205ENST00000483326 BMP6P22004 513 aa4.9□□□□□ -1.63
LTN1-205ENST00000483326 NEK4P51957 841 aa4.9□□□□□ -1.63
LTN1-205ENST00000483326 CBX1P83916 185 aa4.9□□□□□ -1.63
LTN1-205ENST00000483326 PLCL1Q15111 1095 aa4.9□□□□□ -1.63
LTN1-205ENST00000483326 TPH2Q8IWU9 490 aa4.9□□□□□ -1.63
LTN1-205ENST00000483326 GPBAR1Q8TDU6 330 aa4.9□□□□□ -1.63
LTN1-205ENST00000483326 SNRNP27Q8WVK2 155 aaKnown RBP4.9□□□□□ -1.63
LTN1-205ENST00000483326 USP7Q93009 1102 aa4.9□□□□□ -1.63
LTN1-205ENST00000483326 ISL2Q96A47 359 aa4.9□□□□□ -1.63
LTN1-205ENST00000483326 TRMT2BQ96GJ1 504 aaKnown RBP4.9□□□□□ -1.63
LTN1-205ENST00000483326 MENTQ9BUN1 341 aa4.9□□□□□ -1.63
LTN1-205ENST00000483326 IFT22Q9H7X7 185 aa4.9□□□□□ -1.63
LTN1-205ENST00000483326 PICK1Q9NRD5 415 aa4.9□□□□□ -1.63
LTN1-205ENST00000483326 CACNA2D2Q9NY47 1150 aa4.9□□□□□ -1.63
LTN1-205ENST00000483326 FBXO2Q9UK22 296 aaPredicted RBP4.9□□□□□ -1.63
LTN1-205ENST00000483326 TMEM265A0A087WTH1 108 aa4.89□□□□□ -1.63
LTN1-205ENST00000483326 GOLGA6L22H0YM25 854 aa4.89□□□□□ -1.63
LTN1-205ENST00000483326 SRGNP10124 158 aa4.89□□□□□ -1.63
LTN1-205ENST00000483326 TYRP1P17643 537 aa4.89□□□□□ -1.63
LTN1-205ENST00000483326 GJA9P57773 515 aa4.89□□□□□ -1.63
LTN1-205ENST00000483326 SUMO1P63165 101 aaKnown RBP4.89□□□□□ -1.63
LTN1-205ENST00000483326 PRKCQQ04759 706 aa4.89□□□□□ -1.63
LTN1-205ENST00000483326 MLECQ14165 292 aa4.89□□□□□ -1.63
LTN1-205ENST00000483326 ZKSCAN8Q15776 578 aaPredicted RBP4.89□□□□□ -1.63
LTN1-205ENST00000483326 IFI16Q16666 785 aaKnown RBP4.89□□□□□ -1.63
LTN1-205ENST00000483326 PTPN21Q16825 1174 aa4.89□□□□□ -1.63
LTN1-205ENST00000483326 TRIM61Q5EBN2 209 aa4.89□□□□□ -1.63
LTN1-205ENST00000483326 INTS3Q68E01 1043 aaKnown RBP4.89□□□□□ -1.63
LTN1-205ENST00000483326 KIAA1211LQ6NV74 962 aa4.89□□□□□ -1.63
LTN1-205ENST00000483326 PLD6Q8N2A8 252 aaKnown RBP4.89□□□□□ -1.63
LTN1-205ENST00000483326 CCDC89Q8N998 374 aa4.89□□□□□ -1.63
LTN1-205ENST00000483326 PPHLN1Q8NEY8 458 aaKnown RBP4.89□□□□□ -1.63
LTN1-205ENST00000483326 VPS37AQ8NEZ2 397 aa4.89□□□□□ -1.63
LTN1-205ENST00000483326 NCAPGQ9BPX3 1015 aa4.89□□□□□ -1.63
LTN1-205ENST00000483326 PAIP2Q9BPZ3 127 aaKnown RBP4.89□□□□□ -1.63
LTN1-205ENST00000483326 DUSP23Q9BVJ7 150 aa4.89□□□□□ -1.63
LTN1-205ENST00000483326 MAN1C1Q9NR34 630 aa4.89□□□□□ -1.63
LTN1-205ENST00000483326 ARHGEF4Q9NR80 690 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms