RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 LINC00482Q8N8I6 264 aa5.21□□□□□ -1.58
LAPTM4A-202ENST00000483117 AP5M1Q9H0R1 490 aa5.21□□□□□ -1.58
LAPTM4A-202ENST00000483117 CAPN10Q9HC96 672 aa5.21□□□□□ -1.58
LAPTM4A-202ENST00000483117 ACTR10Q9NZ32 417 aa5.21□□□□□ -1.58
LAPTM4A-202ENST00000483117 FBXL7Q9UJT9 491 aa5.21□□□□□ -1.58
LAPTM4A-202ENST00000483117 SMARCA5O60264 1052 aaPredicted RBP5.2□□□□□ -1.58
LAPTM4A-202ENST00000483117 SUSD5O60279 629 aa5.2□□□□□ -1.58
LAPTM4A-202ENST00000483117 SSBP05455 408 aaKnown RBP eCLIP5.2□□□□□ -1.58
LAPTM4A-202ENST00000483117 SNRPB2P08579 225 aaKnown RBP5.2□□□□□ -1.58
LAPTM4A-202ENST00000483117 ADRB1P08588 477 aa5.2□□□□□ -1.58
LAPTM4A-202ENST00000483117 BCL6P41182 706 aa5.2□□□□□ -1.58
LAPTM4A-202ENST00000483117 GJA9P57773 515 aa5.2□□□□□ -1.58
LAPTM4A-202ENST00000483117 RPL11P62913 178 aaKnown RBP5.2□□□□□ -1.58
LAPTM4A-202ENST00000483117 EFEMP1Q12805 493 aa5.2□□□□□ -1.58
LAPTM4A-202ENST00000483117 SF1Q15637 639 aaKnown RBP5.2□□□□□ -1.58
LAPTM4A-202ENST00000483117 SPATS1Q496A3 300 aa5.2□□□□□ -1.58
LAPTM4A-202ENST00000483117 CEP68Q76N32 757 aa5.2□□□□□ -1.58
LAPTM4A-202ENST00000483117 MILR1Q7Z6M3 343 aa5.2□□□□□ -1.58
LAPTM4A-202ENST00000483117 NLRP10Q86W26 655 aa5.2□□□□□ -1.58
LAPTM4A-202ENST00000483117 HOMEZQ8IX15 550 aa5.2□□□□□ -1.58
LAPTM4A-202ENST00000483117 MICAL1Q8TDZ2 1067 aa5.2□□□□□ -1.58
LAPTM4A-202ENST00000483117 SEC14L1Q92503 715 aa5.2□□□□□ -1.58
LAPTM4A-202ENST00000483117 DIO2Q92813 273 aa5.2□□□□□ -1.58
LAPTM4A-202ENST00000483117 C11orf84Q9BUA3 381 aaPredicted RBP5.2□□□□□ -1.58
LAPTM4A-202ENST00000483117 LNPKQ9C0E8 428 aa5.2□□□□□ -1.58
LAPTM4A-202ENST00000483117 TMPRSS5Q9H3S3 457 aa5.2□□□□□ -1.58
LAPTM4A-202ENST00000483117 LRP2BPQ9P2M1 347 aa5.2□□□□□ -1.58
LAPTM4A-202ENST00000483117 PALD1Q9ULE6 856 aa5.2□□□□□ -1.58
LAPTM4A-202ENST00000483117 TIMM13Q9Y5L4 95 aaPredicted RBP5.2□□□□□ -1.58
LAPTM4A-202ENST00000483117 DDAH1O94760 285 aa5.19□□□□□ -1.58
LAPTM4A-202ENST00000483117 ERCC5P28715 1186 aaPredicted RBP5.19□□□□□ -1.58
LAPTM4A-202ENST00000483117 HOXC12P31275 282 aa5.19□□□□□ -1.58
LAPTM4A-202ENST00000483117 THBS2P35442 1172 aa5.19□□□□□ -1.58
LAPTM4A-202ENST00000483117 ETFBP38117 255 aa5.19□□□□□ -1.58
LAPTM4A-202ENST00000483117 STAT5AP42229 794 aa5.19□□□□□ -1.58
LAPTM4A-202ENST00000483117 E4F1Q66K89 784 aaPredicted RBP5.19□□□□□ -1.58
LAPTM4A-202ENST00000483117 MRM1Q6IN84 353 aaKnown RBP5.19□□□□□ -1.58
LAPTM4A-202ENST00000483117 IQCEQ6IPM2 695 aa5.19□□□□□ -1.58
LAPTM4A-202ENST00000483117 MIB1Q86YT6 1006 aa5.19□□□□□ -1.58
LAPTM4A-202ENST00000483117 KREMEN2Q8NCW0 462 aa5.19□□□□□ -1.58
LAPTM4A-202ENST00000483117 ADAMTS17Q8TE56 1095 aa5.19□□□□□ -1.58
LAPTM4A-202ENST00000483117 TRMT2BQ96GJ1 504 aaKnown RBP5.19□□□□□ -1.58
LAPTM4A-202ENST00000483117 K7ESM1 405 aa5.18□□□□□ -1.58
LAPTM4A-202ENST00000483117 MEFVO15553 781 aaPredicted RBP5.18□□□□□ -1.58
LAPTM4A-202ENST00000483117 LCP1P13796 627 aa5.18□□□□□ -1.58
LAPTM4A-202ENST00000483117 KCNJ6P48051 423 aa5.18□□□□□ -1.58
LAPTM4A-202ENST00000483117 SLC6A11P48066 632 aa5.18□□□□□ -1.58
LAPTM4A-202ENST00000483117 TNNI3KQ59H18 835 aa5.18□□□□□ -1.58
LAPTM4A-202ENST00000483117 MROH9Q5TGP6 573 aa5.18□□□□□ -1.58
LAPTM4A-202ENST00000483117 HHIPL2Q6UWX4 724 aa5.18□□□□□ -1.58
LAPTM4A-202ENST00000483117 RIOX2Q8IUF8 465 aa5.18□□□□□ -1.58
LAPTM4A-202ENST00000483117 PPIL6Q8IXY8 311 aa5.18□□□□□ -1.58
LAPTM4A-202ENST00000483117 KYQ8NBH2 561 aa5.18□□□□□ -1.58
LAPTM4A-202ENST00000483117 RCBTB1Q8NDN9 531 aa5.18□□□□□ -1.58
LAPTM4A-202ENST00000483117 PRKAG3Q9UGI9 489 aa5.18□□□□□ -1.58
LAPTM4A-202ENST00000483117 X6R8D5 127 aa5.18□□□□□ -1.58
LAPTM4A-202ENST00000483117 SCG5P05408 212 aa5.17□□□□□ -1.58
LAPTM4A-202ENST00000483117 RPL13P26373 211 aaKnown RBP5.17□□□□□ -1.58
LAPTM4A-202ENST00000483117 ITGA1P56199 1179 aa5.17□□□□□ -1.58
LAPTM4A-202ENST00000483117 RBM10P98175 930 aaKnown RBP5.17□□□□□ -1.58
LAPTM4A-202ENST00000483117 KCNAB2Q13303 367 aa5.17□□□□□ -1.58
LAPTM4A-202ENST00000483117 RGL3Q3MIN7 710 aa5.17□□□□□ -1.58
LAPTM4A-202ENST00000483117 DENND5AQ6IQ26 1287 aa5.17□□□□□ -1.58
LAPTM4A-202ENST00000483117 ZC3H18Q86VM9 953 aaKnown RBP5.17□□□□□ -1.58
LAPTM4A-202ENST00000483117 VPS37DQ86XT2 251 aa5.17□□□□□ -1.58
LAPTM4A-202ENST00000483117 FAM126BQ8IXS8 530 aa5.17□□□□□ -1.58
LAPTM4A-202ENST00000483117 Q8N1Y9 231 aa5.17□□□□□ -1.58
LAPTM4A-202ENST00000483117 TMEM145Q8NBT3 493 aa5.17□□□□□ -1.58
LAPTM4A-202ENST00000483117 TMEM169Q96HH4 297 aa5.17□□□□□ -1.58
LAPTM4A-202ENST00000483117 MYO1BO43795 1136 aa5.16□□□□□ -1.58
LAPTM4A-202ENST00000483117 GTF2A2P52657 109 aa5.16□□□□□ -1.58
LAPTM4A-202ENST00000483117 GFRA1P56159 465 aa5.16□□□□□ -1.58
LAPTM4A-202ENST00000483117 CR1LQ2VPA4 569 aa5.16□□□□□ -1.58
LAPTM4A-202ENST00000483117 ACBD5Q5T8D3 534 aaPredicted RBP5.16□□□□□ -1.58
LAPTM4A-202ENST00000483117 MCTP2Q6DN12 878 aa5.16□□□□□ -1.58
LAPTM4A-202ENST00000483117 CHAMP1Q96JM3 812 aa5.16□□□□□ -1.58
LAPTM4A-202ENST00000483117 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.16□□□□□ -1.589e-6■■■■■ 27.7
LAPTM4A-202ENST00000483117 WDR26Q9H7D7 661 aa5.16□□□□□ -1.58
LAPTM4A-202ENST00000483117 PCDH18Q9HCL0 1135 aa5.16□□□□□ -1.58
LAPTM4A-202ENST00000483117 COA3Q9Y2R0 106 aaPredicted RBP5.16□□□□□ -1.58
LAPTM4A-202ENST00000483117 PCDHA2Q9Y5H9 948 aa5.16□□□□□ -1.58
LAPTM4A-202ENST00000483117 DDX3XO00571 662 aaKnown RBP eCLIP5.15□□□□□ -1.59
LAPTM4A-202ENST00000483117 GJB6O95452 261 aa5.15□□□□□ -1.59
LAPTM4A-202ENST00000483117 CPP00450 1065 aa5.15□□□□□ -1.59
LAPTM4A-202ENST00000483117 LTBRP36941 435 aa5.15□□□□□ -1.59
LAPTM4A-202ENST00000483117 GRIA2P42262 883 aa5.15□□□□□ -1.59
LAPTM4A-202ENST00000483117 ADAM9Q13443 819 aa5.15□□□□□ -1.59
LAPTM4A-202ENST00000483117 LSAMPQ13449 338 aa5.15□□□□□ -1.59
LAPTM4A-202ENST00000483117 FXNQ16595 210 aa5.15□□□□□ -1.59
LAPTM4A-202ENST00000483117 PRR31Q5SQ13 230 aa5.15□□□□□ -1.59
LAPTM4A-202ENST00000483117 TTLL6Q8N841 843 aa5.15□□□□□ -1.59
LAPTM4A-202ENST00000483117 ARRDC4Q8NCT1 418 aa5.15□□□□□ -1.59
LAPTM4A-202ENST00000483117 C1orf159Q96HA4 380 aa5.15□□□□□ -1.59
LAPTM4A-202ENST00000483117 RBM15Q96T37 977 aaKnown RBP eCLIP5.15□□□□□ -1.59
LAPTM4A-202ENST00000483117 YIPF4Q9BSR8 244 aa5.15□□□□□ -1.59
LAPTM4A-202ENST00000483117 ZNF408Q9H9D4 720 aa5.15□□□□□ -1.59
LAPTM4A-202ENST00000483117 CLDND1Q9NY35 253 aa5.15□□□□□ -1.59
LAPTM4A-202ENST00000483117 H7BY64 318 aa5.14□□□□□ -1.59
LAPTM4A-202ENST00000483117 HGSO14964 777 aaPredicted RBP5.14□□□□□ -1.59
LAPTM4A-202ENST00000483117 ITGB3P05106 788 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms