RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 CXCL17Q6UXB2 119 aa9.02□□□□□ -0.96
CCNC-204ENST00000482541 RALYLQ86SE5 291 aaKnown RBP9.02□□□□□ -0.96
CCNC-204ENST00000482541 FAM126BQ8IXS8 530 aa9.02□□□□□ -0.96
CCNC-204ENST00000482541 ZNF710Q8N1W2 664 aa9.02□□□□□ -0.96
CCNC-204ENST00000482541 STAG2Q8N3U4 1231 aa9.02□□□□□ -0.96
CCNC-204ENST00000482541 NSUN6Q8TEA1 469 aaKnown RBP9.02□□□□□ -0.96
CCNC-204ENST00000482541 SCFD2Q8WU76 684 aa9.02□□□□□ -0.96
CCNC-204ENST00000482541 MTMR8Q96EF0 704 aa9.02□□□□□ -0.96
CCNC-204ENST00000482541 IWS1Q96ST2 819 aa9.02□□□□□ -0.96
CCNC-204ENST00000482541 AMNQ9BXJ7 453 aa9.02□□□□□ -0.96
CCNC-204ENST00000482541 VAT1LQ9HCJ6 419 aa9.02□□□□□ -0.96
CCNC-204ENST00000482541 TBX21Q9UL17 535 aa9.02□□□□□ -0.96
CCNC-204ENST00000482541 DDX49Q9Y6V7 483 aaKnown RBP9.02□□□□□ -0.96
CCNC-204ENST00000482541 IFIT3O14879 490 aaKnown RBP9.02□□□□□ -0.97
CCNC-204ENST00000482541 ZBTB5O15062 677 aa9.02□□□□□ -0.97
CCNC-204ENST00000482541 CD4P01730 458 aa9.02□□□□□ -0.97
CCNC-204ENST00000482541 CPT1AP50416 773 aa9.02□□□□□ -0.97
CCNC-204ENST00000482541 BRDTQ58F21 947 aaPredicted RBP9.02□□□□□ -0.97
CCNC-204ENST00000482541 C9orf50Q5SZB4 431 aa9.02□□□□□ -0.97
CCNC-204ENST00000482541 TBC1D5Q92609 795 aa9.02□□□□□ -0.97
CCNC-204ENST00000482541 MTA3Q9BTC8 594 aa9.02□□□□□ -0.97
CCNC-204ENST00000482541 ADAM33Q9BZ11 813 aa9.02□□□□□ -0.97
CCNC-204ENST00000482541 RIOX1Q9H6W3 641 aa9.02□□□□□ -0.97
CCNC-204ENST00000482541 POLR3EQ9NVU0 708 aa9.02□□□□□ -0.97
CCNC-204ENST00000482541 MAD2L2Q9UI95 211 aa9.02□□□□□ -0.97
CCNC-204ENST00000482541 LRRC37A2A6NM11 1700 aa9.01□□□□□ -0.97
CCNC-204ENST00000482541 KPNA6O60684 536 aa9.01□□□□□ -0.97
CCNC-204ENST00000482541 TXNP10599 105 aaKnown RBP9.01□□□□□ -0.97
CCNC-204ENST00000482541 SMAD3P84022 425 aaKnown RBP9.01□□□□□ -0.97
CCNC-204ENST00000482541 GHRHRQ02643 423 aa9.01□□□□□ -0.97
CCNC-204ENST00000482541 GRM4Q14833 912 aa9.01□□□□□ -0.97
CCNC-204ENST00000482541 WTAPQ15007 396 aa9.01□□□□□ -0.97
CCNC-204ENST00000482541 PPP2R5BQ15173 497 aa9.01□□□□□ -0.97
CCNC-204ENST00000482541 TMEM63BQ5T3F8 832 aa9.01□□□□□ -0.97
CCNC-204ENST00000482541 TMTC2Q8N394 836 aa9.01□□□□□ -0.97
CCNC-204ENST00000482541 TMEM199Q8N511 208 aa9.01□□□□□ -0.97
CCNC-204ENST00000482541 SYTL5Q8TDW5 730 aaPredicted RBP9.01□□□□□ -0.97
CCNC-204ENST00000482541 IGDCC4Q8TDY8 1250 aa9.01□□□□□ -0.97
CCNC-204ENST00000482541 TAAR1Q96RJ0 339 aa9.01□□□□□ -0.97
CCNC-204ENST00000482541 PHOX2BQ99453 314 aa9.01□□□□□ -0.97
CCNC-204ENST00000482541 REPIN1Q9BWE0 567 aaKnown RBP9.01□□□□□ -0.97
CCNC-204ENST00000482541 MTMR10Q9NXD2 777 aa9.01□□□□□ -0.97
CCNC-204ENST00000482541 RBM8AQ9Y5S9 174 aaKnown RBP9.01□□□□□ -0.97
CCNC-204ENST00000482541 MYH6P13533 1939 aa9.01□□□□□ -0.97
CCNC-204ENST00000482541 GRIN2DO15399 1336 aa9□□□□□ -0.97
CCNC-204ENST00000482541 PURAQ00577 322 aaKnown RBP9□□□□□ -0.97
CCNC-204ENST00000482541 TROAPQ12815 778 aa9□□□□□ -0.97
CCNC-204ENST00000482541 PPIGQ13427 754 aaKnown RBP eCLIP9□□□□□ -0.97
CCNC-204ENST00000482541 TTLL4Q14679 1199 aa9□□□□□ -0.97
CCNC-204ENST00000482541 STXBP2Q15833 593 aa9□□□□□ -0.97
CCNC-204ENST00000482541 CENPQQ7L2Z9 268 aaPredicted RBP9□□□□□ -0.97
CCNC-204ENST00000482541 RMDN3Q96TC7 470 aa9□□□□□ -0.97
CCNC-204ENST00000482541 MAP3K14Q99558 947 aa9□□□□□ -0.97
CCNC-204ENST00000482541 STXBP5LQ9Y2K9 1186 aa9□□□□□ -0.97
CCNC-204ENST00000482541 PCDHA1Q9Y5I3 950 aa9□□□□□ -0.97
CCNC-204ENST00000482541 HSFX4A0A1B0GTS1 333 aaPredicted RBP9□□□□□ -0.97
CCNC-204ENST00000482541 HSFX3A0A1B0GWH4 333 aaPredicted RBP9□□□□□ -0.97
CCNC-204ENST00000482541 A6NJR5 290 aa9□□□□□ -0.97
CCNC-204ENST00000482541 EIF3JO75822 258 aaKnown RBP9□□□□□ -0.97
CCNC-204ENST00000482541 CFBP00751 764 aa9□□□□□ -0.97
CCNC-204ENST00000482541 SUPT20HL2P0C7V6 817 aa9□□□□□ -0.97
CCNC-204ENST00000482541 PTGS1P23219 599 aa9□□□□□ -0.97
CCNC-204ENST00000482541 SMARCA1P28370 1054 aa9□□□□□ -0.97
CCNC-204ENST00000482541 HSD17B4P51659 736 aa9□□□□□ -0.97
CCNC-204ENST00000482541 EPHB4P54760 987 aa9□□□□□ -0.97
CCNC-204ENST00000482541 NECTIN1Q15223 517 aa9□□□□□ -0.97
CCNC-204ENST00000482541 BMP2KLQ5H9B9 411 aa9□□□□□ -0.97
CCNC-204ENST00000482541 TMEM67Q5HYA8 995 aa9□□□□□ -0.97
CCNC-204ENST00000482541 ARHGEF16Q5VV41 709 aa9□□□□□ -0.97
CCNC-204ENST00000482541 CCDC62Q6P9F0 684 aa9□□□□□ -0.97
CCNC-204ENST00000482541 PADI6Q6TGC4 694 aa9□□□□□ -0.97
CCNC-204ENST00000482541 STOX1Q6ZVD7 989 aa9□□□□□ -0.97
CCNC-204ENST00000482541 Q7L0L9 218 aa9□□□□□ -0.97
CCNC-204ENST00000482541 CATIPQ7Z7H3 387 aa9□□□□□ -0.97
CCNC-204ENST00000482541 MB21D2Q8IYB1 491 aaPredicted RBP9□□□□□ -0.97
CCNC-204ENST00000482541 OR6J1Q8NGC5 347 aa9□□□□□ -0.97
CCNC-204ENST00000482541 RNPC3Q96LT9 517 aaKnown RBP9□□□□□ -0.97
CCNC-204ENST00000482541 ESYT1Q9BSJ8 1104 aa9□□□□□ -0.97
CCNC-204ENST00000482541 COL20A1Q9P218 1284 aa9□□□□□ -0.97
CCNC-204ENST00000482541 LHX6Q9UPM6 363 aa9□□□□□ -0.97
CCNC-204ENST00000482541 TAF6LQ9Y6J9 622 aa9□□□□□ -0.97
CCNC-204ENST00000482541 PNMA6FA0A0J9YX94 578 aa8.99□□□□□ -0.97
CCNC-204ENST00000482541 OPLAHO14841 1288 aa8.99□□□□□ -0.97
CCNC-204ENST00000482541 PPP1R11O60927 126 aaPredicted RBP8.99□□□□□ -0.97
CCNC-204ENST00000482541 NR3C2P08235 984 aa8.99□□□□□ -0.97
CCNC-204ENST00000482541 ZNF697Q5TEC3 545 aa8.99□□□□□ -0.97
CCNC-204ENST00000482541 CHST3Q7LGC8 479 aa8.99□□□□□ -0.97
CCNC-204ENST00000482541 TMEM87BQ96K49 555 aa8.99□□□□□ -0.97
CCNC-204ENST00000482541 MTG1Q9BT17 334 aaPredicted RBP8.99□□□□□ -0.97
CCNC-204ENST00000482541 LSG1Q9H089 658 aaKnown RBP8.99□□□□□ -0.97
CCNC-204ENST00000482541 HIPK3Q9H422 1215 aa8.99□□□□□ -0.97
CCNC-204ENST00000482541 SENP2Q9HC62 589 aa8.99□□□□□ -0.97
CCNC-204ENST00000482541 CYTH3O43739 400 aa8.98□□□□□ -0.97
CCNC-204ENST00000482541 B4GALT4O60513 344 aa8.98□□□□□ -0.97
CCNC-204ENST00000482541 ARIH2O95376 493 aa8.98□□□□□ -0.97
CCNC-204ENST00000482541 GH1P01241 217 aa8.98□□□□□ -0.97
CCNC-204ENST00000482541 MYL3P08590 195 aa8.98□□□□□ -0.97
CCNC-204ENST00000482541 CSF2RAP15509 400 aa8.98□□□□□ -0.97
CCNC-204ENST00000482541 KIF5BP33176 963 aa8.98□□□□□ -0.97
CCNC-204ENST00000482541 MCM5P33992 734 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms