RNA–Protein interactions for RNA: ENST00000482320.5

TNPO3-204, Transcript of transportin 3, humanhuman

TSL 1 (best) BASIC

Gene TNPO3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-204ENST00000482320 SEPT2Q15019 361 aa9.1□□□□□ -0.95
TNPO3-204ENST00000482320 ZNF654Q8IZM8 581 aa9.1□□□□□ -0.95
TNPO3-204ENST00000482320 PNMA1Q8ND90 353 aa9.1□□□□□ -0.95
TNPO3-204ENST00000482320 SMARCC2Q8TAQ2 1214 aa9.1□□□□□ -0.95
TNPO3-204ENST00000482320 GPCPD1Q9NPB8 672 aa9.1□□□□□ -0.95
TNPO3-204ENST00000482320 PCDHA5Q9Y5H7 936 aa9.1□□□□□ -0.95
TNPO3-204ENST00000482320 AKR1B15C9JRZ8 316 aaPredicted RBP9.1□□□□□ -0.95
TNPO3-204ENST00000482320 RASA1P20936 1047 aa9.1□□□□□ -0.95
TNPO3-204ENST00000482320 PDIA3P30101 505 aaKnown RBP9.1□□□□□ -0.95
TNPO3-204ENST00000482320 ICA1Q05084 483 aa9.1□□□□□ -0.95
TNPO3-204ENST00000482320 MAP1SQ66K74 1059 aaPredicted RBP9.1□□□□□ -0.95
TNPO3-204ENST00000482320 SND1Q7KZF4 910 aaKnown RBP eCLIP9.1□□□□□ -0.95
TNPO3-204ENST00000482320 ENAHQ8N8S7 591 aaPredicted RBP9.1□□□□□ -0.95
TNPO3-204ENST00000482320 CEP95Q96GE4 821 aa9.1□□□□□ -0.95
TNPO3-204ENST00000482320 CAPS2Q9BXY5 557 aa9.1□□□□□ -0.95
TNPO3-204ENST00000482320 SWAP70Q9UH65 585 aa9.1□□□□□ -0.95
TNPO3-204ENST00000482320 MYH1P12882 1939 aa9.1□□□□□ -0.95
TNPO3-204ENST00000482320 GLTPD2A6NH11 291 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 CDR1P51861 262 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 SUPT20HL1Q3ZLR7 823 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 WRNIP1Q96S55 665 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 IDI2Q9BXS1 227 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 PICK1Q9NRD5 415 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 SH2B2O14492 632 aaPredicted RBP9.09□□□□□ -0.95
TNPO3-204ENST00000482320 PCP11498 1178 aaKnown RBP9.09□□□□□ -0.95
TNPO3-204ENST00000482320 CASP14P31944 242 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 ELF1P32519 619 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 IRAK1P51617 712 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 EXOSC10Q01780 885 aaKnown RBP9.09□□□□□ -0.95
TNPO3-204ENST00000482320 RBL2Q08999 1139 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 WHAMMP3Q1A5X7 153 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 DCAF15Q66K64 600 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 APOA5Q6Q788 366 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 RAD9BQ6WBX8 426 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 APOBEC3FQ8IUX4 373 aaKnown RBP9.09□□□□□ -0.95
TNPO3-204ENST00000482320 MSL3Q8N5Y2 521 aaKnown RBP9.09□□□□□ -0.95
TNPO3-204ENST00000482320 EHD2Q9NZN4 543 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 FRMPD2Q68DX3 1309 aaPredicted RBP9.09□□□□□ -0.95
TNPO3-204ENST00000482320 KIF28PB7ZC32 967 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 CDKL5O76039 1030 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 KIF4AO95239 1232 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 CTDNEP1O95476 244 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 YEATS4O95619 227 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 KIF5BP33176 963 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 APBA1Q02410 837 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 C2orf54Q08AI8 447 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 TUBB2AQ13885 445 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 C16orf86Q6ZW13 317 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 NKX2-3Q8TAU0 364 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 IFT81Q8WYA0 676 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 RRP36Q96EU6 259 aaKnown RBP9.09□□□□□ -0.95
TNPO3-204ENST00000482320 CCDC17Q96LX7 622 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 TACO1Q9BSH4 297 aaKnown RBP9.09□□□□□ -0.95
TNPO3-204ENST00000482320 TUBB2BQ9BVA1 445 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 HSD3B7Q9H2F3 369 aa9.09□□□□□ -0.95
TNPO3-204ENST00000482320 PPANQ9NQ55 473 aaKnown RBP9.09□□□□□ -0.95
TNPO3-204ENST00000482320 ADM5C9JUS6 153 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 POLR2DO15514 142 aaKnown RBP9.08□□□□□ -0.96
TNPO3-204ENST00000482320 SYF2O95926 243 aaKnown RBP9.08□□□□□ -0.96
TNPO3-204ENST00000482320 SLC1A4P43007 532 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 CLNS1AP54105 237 aaKnown RBP9.08□□□□□ -0.96
TNPO3-204ENST00000482320 FMR1Q06787 632 aaKnown RBP eCLIP9.08□□□□□ -0.968e-7■□□□□ 9.7
TNPO3-204ENST00000482320 SSRP1Q08945 709 aaKnown RBP9.08□□□□□ -0.96
TNPO3-204ENST00000482320 IFT88Q13099 833 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 CCDC178Q5BJE1 867 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 FANCBQ8NB91 859 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 UBA5Q9GZZ9 404 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 CPVLQ9H3G5 476 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 INTS13Q9NVM9 706 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 ANAPC4Q9UJX5 808 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 ODF2LQ9ULJ1 636 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 ADGRG1Q9Y653 693 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 SIP14410 1827 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 ESYT3A0FGR9 886 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 GOLGA6BA6NDN3 693 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 ORC4O43929 436 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 VEGFAP15692 232 aaPredicted RBP9.08□□□□□ -0.96
TNPO3-204ENST00000482320 CMA1P23946 247 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 MCM3P25205 808 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 SEC24CP53992 1094 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 GRIN1Q05586 938 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 SHROOM1Q2M3G4 852 aaPredicted RBP9.08□□□□□ -0.96
TNPO3-204ENST00000482320 MYSM1Q5VVJ2 828 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 ANO1Q5XXA6 986 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 USP17L2Q6R6M4 530 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 ANKRD13CQ8N6S4 541 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 IGDCC4Q8TDY8 1250 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 GLIS2Q9BZE0 524 aaPredicted RBP9.08□□□□□ -0.96
TNPO3-204ENST00000482320 HPCAL4Q9UM19 191 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 TACC3Q9Y6A5 838 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 V9GY48 417 aaPredicted RBP9.08□□□□□ -0.96
TNPO3-204ENST00000482320 ENO4A6NNW6 628 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 GUCY2FP51841 1108 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 PLIN2Q99541 437 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.08□□□□□ -0.96
TNPO3-204ENST00000482320 KANSL2Q9H9L4 492 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 LY9Q9HBG7 655 aa9.08□□□□□ -0.96
TNPO3-204ENST00000482320 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.08□□□□□ -0.96
TNPO3-204ENST00000482320 TRIM75PA6NK02 468 aa9.07□□□□□ -0.96
TNPO3-204ENST00000482320 PPP1R12AO14974 1030 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms