RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 TRIM6-TRIM34B2RNG4 842 aa15.53■□□□□ 0.08
ABCF1-206ENST00000479542 HAS3O00219 553 aa15.53■□□□□ 0.08
ABCF1-206ENST00000479542 PPFIA4O75335 1185 aa15.53■□□□□ 0.08
ABCF1-206ENST00000479542 TGFB3P10600 412 aa15.53■□□□□ 0.08
ABCF1-206ENST00000479542 TRAF1Q13077 416 aa15.53■□□□□ 0.08
ABCF1-206ENST00000479542 LAMC2Q13753 1193 aa15.53■□□□□ 0.08
ABCF1-206ENST00000479542 GPNMBQ14956 572 aa15.53■□□□□ 0.08
ABCF1-206ENST00000479542 USH1GQ495M9 461 aa15.53■□□□□ 0.08
ABCF1-206ENST00000479542 CNKSR3Q6P9H4 555 aa15.53■□□□□ 0.08
ABCF1-206ENST00000479542 FBXO11Q86XK2 927 aa15.53■□□□□ 0.08
ABCF1-206ENST00000479542 PPTC7Q8NI37 304 aa15.53■□□□□ 0.08
ABCF1-206ENST00000479542 TBC1D5Q92609 795 aa15.53■□□□□ 0.08
ABCF1-206ENST00000479542 MTMR8Q96EF0 704 aa15.53■□□□□ 0.08
ABCF1-206ENST00000479542 ZSCAN10Q96SZ4 725 aaPredicted RBP15.53■□□□□ 0.08
ABCF1-206ENST00000479542 C1QTNF1Q9BXJ1 281 aa15.53■□□□□ 0.08
ABCF1-206ENST00000479542 UBA5Q9GZZ9 404 aa15.53■□□□□ 0.08
ABCF1-206ENST00000479542 CNNM2Q9H8M5 875 aa15.53■□□□□ 0.08
ABCF1-206ENST00000479542 ZSWIM5Q9P217 1185 aa15.53■□□□□ 0.08
ABCF1-206ENST00000479542 CTNNA3Q9UI47 895 aa15.53■□□□□ 0.08
ABCF1-206ENST00000479542 BDP1A6H8Y1 2624 aa15.53■□□□□ 0.08
ABCF1-206ENST00000479542 TET1Q8NFU7 2136 aa15.53■□□□□ 0.08
ABCF1-206ENST00000479542 NEDD4P46934 1319 aa15.52■□□□□ 0.08
ABCF1-206ENST00000479542 KDM4AO75164 1064 aa15.52■□□□□ 0.08
ABCF1-206ENST00000479542 F2P00734 622 aa15.52■□□□□ 0.08
ABCF1-206ENST00000479542 NR3C2P08235 984 aa15.52■□□□□ 0.08
ABCF1-206ENST00000479542 GOLGA8HP0CJ92 632 aa15.52■□□□□ 0.08
ABCF1-206ENST00000479542 KCNJ6P48051 423 aa15.52■□□□□ 0.08
ABCF1-206ENST00000479542 HSD17B4P51659 736 aa15.52■□□□□ 0.08
ABCF1-206ENST00000479542 PTK7Q13308 1070 aa15.52■□□□□ 0.08
ABCF1-206ENST00000479542 LY6KQ17RY6 165 aa15.52■□□□□ 0.08
ABCF1-206ENST00000479542 GDF6Q6KF10 455 aaPredicted RBP15.52■□□□□ 0.08
ABCF1-206ENST00000479542 STOX1Q6ZVD7 989 aa15.52■□□□□ 0.08
ABCF1-206ENST00000479542 PLEKHM2Q8IWE5 1019 aa15.52■□□□□ 0.08
ABCF1-206ENST00000479542 ENAHQ8N8S7 591 aaPredicted RBP15.52■□□□□ 0.08
ABCF1-206ENST00000479542 RILPL2Q969X0 211 aa15.52■□□□□ 0.08
ABCF1-206ENST00000479542 CRBNQ96SW2 442 aa15.52■□□□□ 0.08
ABCF1-206ENST00000479542 KRT23Q9C075 422 aa15.52■□□□□ 0.08
ABCF1-206ENST00000479542 RWDD1Q9H446 243 aaPredicted RBP15.52■□□□□ 0.08
ABCF1-206ENST00000479542 JMJD4Q9H9V9 463 aa15.52■□□□□ 0.08
ABCF1-206ENST00000479542 COL20A1Q9P218 1284 aa15.52■□□□□ 0.08
ABCF1-206ENST00000479542 KIAA1217Q5T5P2 1943 aa15.52■□□□□ 0.07
ABCF1-206ENST00000479542 TRIP12Q14669 1992 aaPredicted RBP15.51■□□□□ 0.07
ABCF1-206ENST00000479542 TLL1O43897 1013 aa15.51■□□□□ 0.07
ABCF1-206ENST00000479542 PARP1P09874 1014 aaKnown RBP15.51■□□□□ 0.07
ABCF1-206ENST00000479542 CKBP12277 381 aa15.51■□□□□ 0.07
ABCF1-206ENST00000479542 WDR5P61964 334 aaKnown RBP15.51■□□□□ 0.07
ABCF1-206ENST00000479542 QRICH1Q2TAL8 776 aa15.51■□□□□ 0.07
ABCF1-206ENST00000479542 ARHGEF16Q5VV41 709 aa15.51■□□□□ 0.07
ABCF1-206ENST00000479542 SEPT14Q6ZU15 432 aa15.51■□□□□ 0.07
ABCF1-206ENST00000479542 LRRC8DQ7L1W4 858 aa15.51■□□□□ 0.07
ABCF1-206ENST00000479542 RAD9AQ99638 391 aa15.51■□□□□ 0.07
ABCF1-206ENST00000479542 AMNQ9BXJ7 453 aa15.51■□□□□ 0.07
ABCF1-206ENST00000479542 LNPKQ9C0E8 428 aa15.51■□□□□ 0.07
ABCF1-206ENST00000479542 PXMP2Q9NR77 195 aa15.51■□□□□ 0.07
ABCF1-206ENST00000479542 REV3LO60673 3130 aa15.51■□□□□ 0.07
ABCF1-206ENST00000479542 LPXNO60711 386 aa15.5■□□□□ 0.07
ABCF1-206ENST00000479542 GJB5O95377 273 aa15.5■□□□□ 0.07
ABCF1-206ENST00000479542 NUCB1Q02818 461 aa15.5■□□□□ 0.07
ABCF1-206ENST00000479542 IMMTQ16891 758 aaKnown RBP15.5■□□□□ 0.07
ABCF1-206ENST00000479542 CHD1LQ86WJ1 897 aa15.5■□□□□ 0.07
ABCF1-206ENST00000479542 C7orf31Q8N865 590 aa15.5■□□□□ 0.07
ABCF1-206ENST00000479542 DHX38Q92620 1227 aaKnown RBP15.5■□□□□ 0.07
ABCF1-206ENST00000479542 HLA-CQ95604 372 aa15.5■□□□□ 0.07
ABCF1-206ENST00000479542 ZKSCAN3Q9BRR0 538 aa15.5■□□□□ 0.07
ABCF1-206ENST00000479542 EMSYQ7Z589 1322 aa15.49■□□□□ 0.07
ABCF1-206ENST00000479542 EPOPA6NHQ4 379 aa15.49■□□□□ 0.07
ABCF1-206ENST00000479542 OPLAHO14841 1288 aa15.49■□□□□ 0.07
ABCF1-206ENST00000479542 NBNO60934 754 aa15.49■□□□□ 0.07
ABCF1-206ENST00000479542 PSEN2P49810 448 aa15.49■□□□□ 0.07
ABCF1-206ENST00000479542 ERVK-21P61565 698 aa15.49■□□□□ 0.07
ABCF1-206ENST00000479542 GRB10Q13322 594 aa15.49■□□□□ 0.07
ABCF1-206ENST00000479542 IKBKEQ14164 716 aa15.49■□□□□ 0.07
ABCF1-206ENST00000479542 TRIM71Q2Q1W2 868 aaKnown RBP15.49■□□□□ 0.07
ABCF1-206ENST00000479542 MYSM1Q5VVJ2 828 aa15.49■□□□□ 0.07
ABCF1-206ENST00000479542 VSIG10LQ86VR7 867 aa15.49■□□□□ 0.07
ABCF1-206ENST00000479542 DHX37Q8IY37 1157 aaKnown RBP15.49■□□□□ 0.07
ABCF1-206ENST00000479542 PDCD2LQ9BRP1 358 aa15.49■□□□□ 0.07
ABCF1-206ENST00000479542 HDAC6Q9UBN7 1215 aa15.49■□□□□ 0.07
ABCF1-206ENST00000479542 LAMA4Q16363 1823 aa15.48■□□□□ 0.07
ABCF1-206ENST00000479542 B4E1Z4 1266 aa15.48■□□□□ 0.07
ABCF1-206ENST00000479542 RFXAPO00287 272 aa15.48■□□□□ 0.07
ABCF1-206ENST00000479542 ZBTB5O15062 677 aa15.48■□□□□ 0.07
ABCF1-206ENST00000479542 ARHGEF15O94989 841 aa15.48■□□□□ 0.07
ABCF1-206ENST00000479542 HOXC8P31273 242 aa15.48■□□□□ 0.07
ABCF1-206ENST00000479542 TFF2Q03403 129 aa15.48■□□□□ 0.07
ABCF1-206ENST00000479542 MFSD10Q14728 455 aa15.48■□□□□ 0.07
ABCF1-206ENST00000479542 SEC23AQ15436 765 aa15.48■□□□□ 0.07
ABCF1-206ENST00000479542 KIAA0753Q2KHM9 967 aa15.48■□□□□ 0.07
ABCF1-206ENST00000479542 CELF3Q5SZQ8 465 aaKnown RBP15.48■□□□□ 0.07
ABCF1-206ENST00000479542 TRAF7Q6Q0C0 670 aa15.48■□□□□ 0.07
ABCF1-206ENST00000479542 CWC27Q6UX04 472 aaKnown RBP15.48■□□□□ 0.07
ABCF1-206ENST00000479542 ARNTL2Q8WYA1 636 aa15.48■□□□□ 0.07
ABCF1-206ENST00000479542 CPVLQ9H3G5 476 aa15.48■□□□□ 0.07
ABCF1-206ENST00000479542 DIAPH3Q9NSV4 1193 aa15.48■□□□□ 0.07
ABCF1-206ENST00000479542 MRVI1Q9Y6F6 885 aa15.48■□□□□ 0.07
ABCF1-206ENST00000479542 PALM3A6NDB9 673 aaPredicted RBP15.47■□□□□ 0.07
ABCF1-206ENST00000479542 KLRF2D3W0D1 207 aa15.47■□□□□ 0.07
ABCF1-206ENST00000479542 CAND2O75155 1236 aa15.47■□□□□ 0.07
ABCF1-206ENST00000479542 STAM2O75886 525 aa15.47■□□□□ 0.07
ABCF1-206ENST00000479542 RGS20O76081 388 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms