RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 NKRFO15226 690 aaKnown RBP eCLIP10.49□□□□□ -0.73
CMTM1-208ENST00000479381 ADCY6O43306 1168 aa10.49□□□□□ -0.73
CMTM1-208ENST00000479381 SORBS3O60504 671 aa10.49□□□□□ -0.73
CMTM1-208ENST00000479381 CABYRO75952 493 aa10.49□□□□□ -0.73
CMTM1-208ENST00000479381 PTGS1P23219 599 aa10.49□□□□□ -0.73
CMTM1-208ENST00000479381 CST5P28325 142 aaPredicted RBP10.49□□□□□ -0.73
CMTM1-208ENST00000479381 FXR1P51114 621 aaKnown RBP eCLIP10.49□□□□□ -0.73
CMTM1-208ENST00000479381 DUSP28Q4G0W2 176 aa10.49□□□□□ -0.73
CMTM1-208ENST00000479381 CMTR1Q8N1G2 835 aaKnown RBP10.49□□□□□ -0.73
CMTM1-208ENST00000479381 KLHDC9Q8NEP7 349 aa10.49□□□□□ -0.73
CMTM1-208ENST00000479381 JAKMIP1Q96N16 626 aaKnown RBP10.49□□□□□ -0.73
CMTM1-208ENST00000479381 LZTS2Q9BRK4 669 aa10.49□□□□□ -0.73
CMTM1-208ENST00000479381 UPF3AQ9H1J1 476 aaKnown RBP10.49□□□□□ -0.73
CMTM1-208ENST00000479381 PDLIM7Q9NR12 457 aa10.49□□□□□ -0.73
CMTM1-208ENST00000479381 PPP4R2Q9NY27 417 aa10.49□□□□□ -0.73
CMTM1-208ENST00000479381 ASTN1O14525 1302 aa10.49□□□□□ -0.73
CMTM1-208ENST00000479381 ELP1O95163 1332 aa10.49□□□□□ -0.73
CMTM1-208ENST00000479381 GOLGA8AA7E2F4 631 aa10.48□□□□□ -0.73
CMTM1-208ENST00000479381 GOLGA8BA8MQT2 603 aa10.48□□□□□ -0.73
CMTM1-208ENST00000479381 ARVCFO00192 962 aa10.48□□□□□ -0.73
CMTM1-208ENST00000479381 ZBTB43O43298 467 aa10.48□□□□□ -0.73
CMTM1-208ENST00000479381 PLEKHA8P1O95397 391 aa10.48□□□□□ -0.73
CMTM1-208ENST00000479381 HMGB1P09429 215 aaKnown RBP10.48□□□□□ -0.73
CMTM1-208ENST00000479381 CCND2P30279 289 aa10.48□□□□□ -0.73
CMTM1-208ENST00000479381 PSMC6P62333 389 aa10.48□□□□□ -0.73
CMTM1-208ENST00000479381 TROAPQ12815 778 aa10.48□□□□□ -0.73
CMTM1-208ENST00000479381 ITGA7Q13683 1181 aa10.48□□□□□ -0.73
CMTM1-208ENST00000479381 DSG2Q14126 1118 aa10.48□□□□□ -0.73
CMTM1-208ENST00000479381 NECTIN1Q15223 517 aa10.48□□□□□ -0.73
CMTM1-208ENST00000479381 RTN1Q16799 776 aa10.48□□□□□ -0.73
CMTM1-208ENST00000479381 TAPT1Q6NXT6 567 aa10.48□□□□□ -0.73
CMTM1-208ENST00000479381 BLOC1S2Q6QNY1 142 aa10.48□□□□□ -0.73
CMTM1-208ENST00000479381 HEATR3Q7Z4Q2 680 aa10.48□□□□□ -0.73
CMTM1-208ENST00000479381 SH3RF1Q7Z6J0 888 aa10.48□□□□□ -0.73
CMTM1-208ENST00000479381 RGS22Q8NE09 1264 aa10.48□□□□□ -0.73
CMTM1-208ENST00000479381 IGDCC4Q8TDY8 1250 aa10.48□□□□□ -0.73
CMTM1-208ENST00000479381 COPS5Q92905 334 aa10.48□□□□□ -0.73
CMTM1-208ENST00000479381 IWS1Q96ST2 819 aa10.48□□□□□ -0.73
CMTM1-208ENST00000479381 GDF15Q99988 308 aa10.48□□□□□ -0.73
CMTM1-208ENST00000479381 MTA3Q9BTC8 594 aa10.48□□□□□ -0.73
CMTM1-208ENST00000479381 KATNBL1Q9H079 304 aa10.48□□□□□ -0.73
CMTM1-208ENST00000479381 PXMP2Q9NR77 195 aa10.48□□□□□ -0.73
CMTM1-208ENST00000479381 RBM28Q9NW13 759 aaKnown RBP10.48□□□□□ -0.73
CMTM1-208ENST00000479381 GNEQ9Y223 722 aaKnown RBP10.48□□□□□ -0.73
CMTM1-208ENST00000479381 KLF18A0A0U1RQI7 1052 aa10.47□□□□□ -0.73
CMTM1-208ENST00000479381 hCG_1642624A0A1W2PR95 340 aa10.47□□□□□ -0.73
CMTM1-208ENST00000479381 FAM205CA6NFA0 338 aa10.47□□□□□ -0.73
CMTM1-208ENST00000479381 SLC34A2O95436 690 aa10.47□□□□□ -0.73
CMTM1-208ENST00000479381 GH1P01241 217 aa10.47□□□□□ -0.73
CMTM1-208ENST00000479381 NR3C2P08235 984 aa10.47□□□□□ -0.73
CMTM1-208ENST00000479381 BMP8BP34820 402 aa10.47□□□□□ -0.73
CMTM1-208ENST00000479381 LIFRP42702 1097 aa10.47□□□□□ -0.73
CMTM1-208ENST00000479381 AKAP17AQ02040 695 aaKnown RBP10.47□□□□□ -0.73
CMTM1-208ENST00000479381 FPGSQ05932 587 aa10.47□□□□□ -0.73
CMTM1-208ENST00000479381 SNX17Q15036 470 aa10.47□□□□□ -0.73
CMTM1-208ENST00000479381 PPP1R15BQ5SWA1 713 aa10.47□□□□□ -0.73
CMTM1-208ENST00000479381 DHX32Q7L7V1 743 aaKnown RBP10.47□□□□□ -0.73
CMTM1-208ENST00000479381 DHX37Q8IY37 1157 aaKnown RBP10.47□□□□□ -0.73
CMTM1-208ENST00000479381 LARP6Q9BRS8 491 aaKnown RBP10.47□□□□□ -0.73
CMTM1-208ENST00000479381 MTG1Q9BT17 334 aaPredicted RBP10.47□□□□□ -0.73
CMTM1-208ENST00000479381 RIOX1Q9H6W3 641 aa10.47□□□□□ -0.73
CMTM1-208ENST00000479381 EHMT1Q9H9B1 1298 aa10.47□□□□□ -0.73
CMTM1-208ENST00000479381 COL20A1Q9P218 1284 aa10.47□□□□□ -0.73
CMTM1-208ENST00000479381 Q9Y3F1 56 aa10.47□□□□□ -0.73
CMTM1-208ENST00000479381 TRIM43BA6NCK2 446 aa10.46□□□□□ -0.73
CMTM1-208ENST00000479381 SPDYE3A6NKU9 549 aa10.46□□□□□ -0.73
CMTM1-208ENST00000479381 NOP56O00567 594 aaKnown RBP10.46□□□□□ -0.73
CMTM1-208ENST00000479381 PPP1R11O60927 126 aaPredicted RBP10.46□□□□□ -0.73
CMTM1-208ENST00000479381 EIF3JO75822 258 aaKnown RBP10.46□□□□□ -0.73
CMTM1-208ENST00000479381 PSMA5P28066 241 aa10.46□□□□□ -0.73
CMTM1-208ENST00000479381 METAP2P50579 478 aaKnown RBP eCLIP10.46□□□□□ -0.73
CMTM1-208ENST00000479381 LY6KQ17RY6 165 aa10.46□□□□□ -0.73
CMTM1-208ENST00000479381 GNPTABQ3T906 1256 aa10.46□□□□□ -0.73
CMTM1-208ENST00000479381 ARSIQ5FYB1 569 aa10.46□□□□□ -0.73
CMTM1-208ENST00000479381 TMEM63BQ5T3F8 832 aa10.46□□□□□ -0.73
CMTM1-208ENST00000479381 C1orf53Q5VUE5 145 aa10.46□□□□□ -0.73
CMTM1-208ENST00000479381 TMEM199Q8N511 208 aa10.46□□□□□ -0.73
CMTM1-208ENST00000479381 FANCBQ8NB91 859 aa10.46□□□□□ -0.73
CMTM1-208ENST00000479381 MORC4Q8TE76 937 aa10.46□□□□□ -0.73
CMTM1-208ENST00000479381 TRIM43Q96BQ3 446 aaPredicted RBP10.46□□□□□ -0.73
CMTM1-208ENST00000479381 DDX27Q96GQ7 796 aaKnown RBP10.46□□□□□ -0.73
CMTM1-208ENST00000479381 LRCH3Q96II8 777 aa10.46□□□□□ -0.73
CMTM1-208ENST00000479381 RNPC3Q96LT9 517 aaKnown RBP10.46□□□□□ -0.73
CMTM1-208ENST00000479381 MAP3K14Q99558 947 aa10.46□□□□□ -0.73
CMTM1-208ENST00000479381 SPZ1Q9BXG8 430 aa10.46□□□□□ -0.73
CMTM1-208ENST00000479381 MAF1Q9H063 256 aa10.46□□□□□ -0.73
CMTM1-208ENST00000479381 MLXIPQ9HAP2 919 aa10.46□□□□□ -0.73
CMTM1-208ENST00000479381 MAP3K20Q9NYL2 800 aaKnown RBP10.46□□□□□ -0.73
CMTM1-208ENST00000479381 TRIOBPQ9H2D6 2365 aa10.46□□□□□ -0.74
CMTM1-208ENST00000479381 CYTH3O43739 400 aa10.45□□□□□ -0.74
CMTM1-208ENST00000479381 KPNA6O60684 536 aa10.45□□□□□ -0.74
CMTM1-208ENST00000479381 CASTP20810 708 aaKnown RBP10.45□□□□□ -0.74
CMTM1-208ENST00000479381 EDNRBP24530 442 aa10.45□□□□□ -0.74
CMTM1-208ENST00000479381 HSD17B4P51659 736 aa10.45□□□□□ -0.74
CMTM1-208ENST00000479381 NAPAP54920 295 aa10.45□□□□□ -0.74
CMTM1-208ENST00000479381 SP4Q02446 784 aa10.45□□□□□ -0.74
CMTM1-208ENST00000479381 PPIGQ13427 754 aaKnown RBP eCLIP10.45□□□□□ -0.74
CMTM1-208ENST00000479381 PGM5Q15124 567 aa10.45□□□□□ -0.74
CMTM1-208ENST00000479381 ADCK5Q3MIX3 580 aa10.45□□□□□ -0.74
CMTM1-208ENST00000479381 Q6ZUG5 572 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms