RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 VTA1Q9NP79 307 aa17.42■□□□□ 0.38
COL16A1-211ENST00000479100 GJB4Q9NTQ9 266 aa17.42■□□□□ 0.38
COL16A1-211ENST00000479100 LCTP09848 1927 aa17.42■□□□□ 0.38
COL16A1-211ENST00000479100 ADAMTS3O15072 1205 aa17.41■□□□□ 0.38
COL16A1-211ENST00000479100 SEPT4O43236 478 aa17.41■□□□□ 0.38
COL16A1-211ENST00000479100 COL6A1P12109 1028 aa17.41■□□□□ 0.38
COL16A1-211ENST00000479100 EDNRBP24530 442 aa17.41■□□□□ 0.38
COL16A1-211ENST00000479100 CCND2P30279 289 aa17.41■□□□□ 0.38
COL16A1-211ENST00000479100 HMGN5P82970 282 aaKnown RBP17.41■□□□□ 0.38
COL16A1-211ENST00000479100 TRIM29Q14134 588 aa17.41■□□□□ 0.38
COL16A1-211ENST00000479100 IL31RAQ8NI17 732 aa17.41■□□□□ 0.38
COL16A1-211ENST00000479100 RASGRP4Q8TDF6 673 aa17.41■□□□□ 0.38
COL16A1-211ENST00000479100 FAM184BQ9ULE4 1060 aa17.41■□□□□ 0.38
COL16A1-211ENST00000479100 FOSP01100 380 aaPredicted RBP17.4■□□□□ 0.38
COL16A1-211ENST00000479100 AKR1A1P14550 325 aa17.4■□□□□ 0.38
COL16A1-211ENST00000479100 CCDC144BQ3MJ40 725 aa17.4■□□□□ 0.38
COL16A1-211ENST00000479100 SEPT14Q6ZU15 432 aa17.4■□□□□ 0.38
COL16A1-211ENST00000479100 TEX2Q8IWB9 1127 aa17.4■□□□□ 0.38
COL16A1-211ENST00000479100 HSCBQ8IWL3 235 aa17.4■□□□□ 0.38
COL16A1-211ENST00000479100 BLIDQ8IZY5 108 aa17.4■□□□□ 0.38
COL16A1-211ENST00000479100 ANO3Q9BYT9 981 aa17.4■□□□□ 0.38
COL16A1-211ENST00000479100 KATNBL1Q9H079 304 aa17.4■□□□□ 0.38
COL16A1-211ENST00000479100 C11orf49Q9H6J7 331 aa17.4■□□□□ 0.38
COL16A1-211ENST00000479100 PDGFCQ9NRA1 345 aa17.4■□□□□ 0.38
COL16A1-211ENST00000479100 DDX20Q9UHI6 824 aaKnown RBP17.4■□□□□ 0.38
COL16A1-211ENST00000479100 PCDHA4Q9UN74 947 aa17.4■□□□□ 0.38
COL16A1-211ENST00000479100 MCM3APO60318 1980 aa17.4■□□□□ 0.38
COL16A1-211ENST00000479100 K7ELQ4 463 aaPredicted RBP17.39■□□□□ 0.37
COL16A1-211ENST00000479100 EIF3JO75822 258 aaKnown RBP17.39■□□□□ 0.37
COL16A1-211ENST00000479100 MYCNP04198 464 aaPredicted RBP17.39■□□□□ 0.37
COL16A1-211ENST00000479100 ADCYAP1R1P41586 468 aa17.39■□□□□ 0.37
COL16A1-211ENST00000479100 CLK2P49760 499 aaKnown RBP17.39■□□□□ 0.37
COL16A1-211ENST00000479100 GUCY1B3Q02153 619 aa17.39■□□□□ 0.37
COL16A1-211ENST00000479100 AP3B2Q13367 1082 aa17.39■□□□□ 0.37
COL16A1-211ENST00000479100 VSIG10LQ86VR7 867 aa17.39■□□□□ 0.37
COL16A1-211ENST00000479100 LENG1Q96BZ8 264 aaPredicted RBP17.39■□□□□ 0.37
COL16A1-211ENST00000479100 C8orf76Q96K31 380 aa17.39■□□□□ 0.37
COL16A1-211ENST00000479100 RTEL1Q9NZ71 1219 aa17.39■□□□□ 0.37
COL16A1-211ENST00000479100 SMC3Q9UQE7 1217 aa17.39■□□□□ 0.37
COL16A1-211ENST00000479100 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.39■□□□□ 0.37
COL16A1-211ENST00000479100 MSCO60682 206 aa17.38■□□□□ 0.37
COL16A1-211ENST00000479100 RARBP10826 455 aa17.38■□□□□ 0.37
COL16A1-211ENST00000479100 TNFAIP2Q03169 654 aa17.38■□□□□ 0.37
COL16A1-211ENST00000479100 MCTP2Q6DN12 878 aa17.38■□□□□ 0.37
COL16A1-211ENST00000479100 GALNT17Q6IS24 598 aa17.38■□□□□ 0.37
COL16A1-211ENST00000479100 TAPT1Q6NXT6 567 aa17.38■□□□□ 0.37
COL16A1-211ENST00000479100 FAM177A1Q8N128 213 aaPredicted RBP17.38■□□□□ 0.37
COL16A1-211ENST00000479100 SNX21Q969T3 373 aa17.38■□□□□ 0.37
COL16A1-211ENST00000479100 PHF20Q9BVI0 1012 aa17.38■□□□□ 0.37
COL16A1-211ENST00000479100 BRMS1Q9HCU9 246 aa17.38■□□□□ 0.37
COL16A1-211ENST00000479100 FRMPD4Q14CM0 1322 aa17.38■□□□□ 0.37
COL16A1-211ENST00000479100 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.37■□□□□ 0.37
COL16A1-211ENST00000479100 GJB2P29033 226 aa17.37■□□□□ 0.37
COL16A1-211ENST00000479100 PCNX4Q63HM2 1172 aa17.37■□□□□ 0.37
COL16A1-211ENST00000479100 KRT40Q6A162 431 aa17.37■□□□□ 0.37
COL16A1-211ENST00000479100 IQSEC1Q6DN90 963 aa17.37■□□□□ 0.37
COL16A1-211ENST00000479100 DAGLBQ8NCG7 672 aa17.37■□□□□ 0.37
COL16A1-211ENST00000479100 SCFD2Q8WU76 684 aa17.37■□□□□ 0.37
COL16A1-211ENST00000479100 WDR11Q9BZH6 1224 aa17.37■□□□□ 0.37
COL16A1-211ENST00000479100 FOXD4L1Q9NU39 408 aa17.37■□□□□ 0.37
COL16A1-211ENST00000479100 KIF3AQ9Y496 699 aa17.37■□□□□ 0.37
COL16A1-211ENST00000479100 A0A1W2PPC1 479 aa17.36■□□□□ 0.37
COL16A1-211ENST00000479100 KRT2P35908 639 aa17.36■□□□□ 0.37
COL16A1-211ENST00000479100 ZNF76P36508 570 aa17.36■□□□□ 0.37
COL16A1-211ENST00000479100 MRPS9P82933 396 aaKnown RBP17.36■□□□□ 0.37
COL16A1-211ENST00000479100 CUL4AQ13619 759 aa17.36■□□□□ 0.37
COL16A1-211ENST00000479100 TTLL4Q14679 1199 aa17.36■□□□□ 0.37
COL16A1-211ENST00000479100 TMEM63BQ5T3F8 832 aa17.36■□□□□ 0.37
COL16A1-211ENST00000479100 XRRA1Q6P2D8 792 aa17.36■□□□□ 0.37
COL16A1-211ENST00000479100 OXER1Q8TDS5 423 aa17.36■□□□□ 0.37
COL16A1-211ENST00000479100 GDF15Q99988 308 aa17.36■□□□□ 0.37
COL16A1-211ENST00000479100 XPNPEP3Q9NQH7 507 aa17.36■□□□□ 0.37
COL16A1-211ENST00000479100 MRVI1Q9Y6F6 885 aa17.36■□□□□ 0.37
COL16A1-211ENST00000479100 CCDC194A0A1B0GVG4 234 aa17.35■□□□□ 0.37
COL16A1-211ENST00000479100 ADCY6O43306 1168 aa17.35■□□□□ 0.37
COL16A1-211ENST00000479100 PGK1P00558 417 aa17.35■□□□□ 0.37
COL16A1-211ENST00000479100 TXNP10599 105 aaKnown RBP17.35■□□□□ 0.37
COL16A1-211ENST00000479100 SMPD1P17405 629 aa17.35■□□□□ 0.37
COL16A1-211ENST00000479100 SREBF1P36956 1147 aa17.35■□□□□ 0.37
COL16A1-211ENST00000479100 ARHGAP4P98171 946 aa17.35■□□□□ 0.37
COL16A1-211ENST00000479100 SAFBQ15424 915 aaKnown RBP eCLIP17.35■□□□□ 0.37
COL16A1-211ENST00000479100 NPY5RQ15761 445 aa17.35■□□□□ 0.37
COL16A1-211ENST00000479100 GNPTABQ3T906 1256 aa17.35■□□□□ 0.37
COL16A1-211ENST00000479100 GJC2Q5T442 439 aaPredicted RBP17.35■□□□□ 0.37
COL16A1-211ENST00000479100 NLRX1Q86UT6 975 aa17.35■□□□□ 0.37
COL16A1-211ENST00000479100 C7orf61Q8IZ16 206 aa17.35■□□□□ 0.37
COL16A1-211ENST00000479100 RBM47A0AV96 593 aaKnown RBP17.34■□□□□ 0.37
COL16A1-211ENST00000479100 DYNC1LI2O43237 492 aaPredicted RBP17.34■□□□□ 0.37
COL16A1-211ENST00000479100 DUSP11O75319 330 aaKnown RBP17.34■□□□□ 0.37
COL16A1-211ENST00000479100 STAM2O75886 525 aa17.34■□□□□ 0.37
COL16A1-211ENST00000479100 RGS20O76081 388 aa17.34■□□□□ 0.37
COL16A1-211ENST00000479100 MMP1P03956 469 aa17.34■□□□□ 0.37
COL16A1-211ENST00000479100 HSP90AA1P07900 732 aaKnown RBP17.34■□□□□ 0.37
COL16A1-211ENST00000479100 PTGS1P23219 599 aa17.34■□□□□ 0.37
COL16A1-211ENST00000479100 BMP8BP34820 402 aa17.34■□□□□ 0.37
COL16A1-211ENST00000479100 KRT25Q7Z3Z0 450 aa17.34■□□□□ 0.37
COL16A1-211ENST00000479100 DIS3L2Q8IYB7 885 aaKnown RBP17.34■□□□□ 0.37
COL16A1-211ENST00000479100 COPS5Q92905 334 aa17.34■□□□□ 0.37
COL16A1-211ENST00000479100 AP5M1Q9H0R1 490 aa17.34■□□□□ 0.37
COL16A1-211ENST00000479100 SPC25Q9HBM1 224 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms