RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 CCDC62Q6P9F0 684 aa15.44■□□□□ 0.06
VCL-205ENST00000478896 CAGE1Q8TC20 777 aa15.44■□□□□ 0.06
VCL-205ENST00000478896 ANKS1AQ92625 1134 aa15.44■□□□□ 0.06
VCL-205ENST00000478896 ASB2Q96Q27 587 aa15.44■□□□□ 0.06
VCL-205ENST00000478896 CERS4Q9HA82 394 aa15.44■□□□□ 0.06
VCL-205ENST00000478896 MRVI1Q9Y6F6 885 aa15.44■□□□□ 0.06
VCL-205ENST00000478896 MYH7BA7E2Y1 1941 aa15.43■□□□□ 0.06
VCL-205ENST00000478896 GTPBP6O43824 516 aaPredicted RBP15.43■□□□□ 0.06
VCL-205ENST00000478896 KCNJ6P48051 423 aa15.43■□□□□ 0.06
VCL-205ENST00000478896 ARHGAP1Q07960 439 aa15.43■□□□□ 0.06
VCL-205ENST00000478896 DGKDQ16760 1214 aa15.43■□□□□ 0.06
VCL-205ENST00000478896 PHOSPHO2Q8TCD6 241 aa15.43■□□□□ 0.06
VCL-205ENST00000478896 AFAP1L1Q8TED9 768 aa15.43■□□□□ 0.06
VCL-205ENST00000478896 KATNAL1Q9BW62 490 aa15.43■□□□□ 0.06
VCL-205ENST00000478896 AMNQ9BXJ7 453 aa15.43■□□□□ 0.06
VCL-205ENST00000478896 JMJD4Q9H9V9 463 aa15.43■□□□□ 0.06
VCL-205ENST00000478896 BAIAP3O94812 1187 aa15.42■□□□□ 0.06
VCL-205ENST00000478896 GDF6Q6KF10 455 aaPredicted RBP15.42■□□□□ 0.06
VCL-205ENST00000478896 C7orf31Q8N865 590 aa15.42■□□□□ 0.06
VCL-205ENST00000478896 TET1Q8NFU7 2136 aa15.42■□□□□ 0.06
VCL-205ENST00000478896 EXOC6Q8TAG9 804 aa15.42■□□□□ 0.06
VCL-205ENST00000478896 ADAMTS19Q8TE59 1207 aa15.42■□□□□ 0.06
VCL-205ENST00000478896 ALG1Q9BT22 464 aa15.42■□□□□ 0.06
VCL-205ENST00000478896 PXMP2Q9NR77 195 aa15.42■□□□□ 0.06
VCL-205ENST00000478896 PTPRSQ13332 1948 aa15.41■□□□□ 0.06
VCL-205ENST00000478896 EIF3JO75822 258 aaKnown RBP15.41■□□□□ 0.06
VCL-205ENST00000478896 NR3C2P08235 984 aa15.41■□□□□ 0.06
VCL-205ENST00000478896 ZNF286BP0CG31 522 aa15.41■□□□□ 0.06
VCL-205ENST00000478896 MYCLP12524 364 aaPredicted RBP15.41■□□□□ 0.06
VCL-205ENST00000478896 TRDNQ13061 729 aa15.41■□□□□ 0.06
VCL-205ENST00000478896 LRRC8DQ7L1W4 858 aa15.41■□□□□ 0.06
VCL-205ENST00000478896 SESTD1Q86VW0 696 aa15.41■□□□□ 0.06
VCL-205ENST00000478896 HERC6Q8IVU3 1022 aa15.41■□□□□ 0.06
VCL-205ENST00000478896 STAG2Q8N3U4 1231 aa15.41■□□□□ 0.06
VCL-205ENST00000478896 ARNTL2Q8WYA1 636 aa15.41■□□□□ 0.06
VCL-205ENST00000478896 UHRF1Q96T88 793 aaPredicted RBP15.41■□□□□ 0.06
VCL-205ENST00000478896 GTF2IRD1Q9UHL9 959 aa15.41■□□□□ 0.06
VCL-205ENST00000478896 DDX41Q9UJV9 622 aaKnown RBP15.41■□□□□ 0.06
VCL-205ENST00000478896 KLRF2D3W0D1 207 aa15.4■□□□□ 0.06
VCL-205ENST00000478896 RFXAPO00287 272 aa15.4■□□□□ 0.06
VCL-205ENST00000478896 TLL1O43897 1013 aa15.4■□□□□ 0.06
VCL-205ENST00000478896 SELPP16109 830 aa15.4■□□□□ 0.06
VCL-205ENST00000478896 PSEN2P49810 448 aa15.4■□□□□ 0.06
VCL-205ENST00000478896 LAMC2Q13753 1193 aa15.4■□□□□ 0.06
VCL-205ENST00000478896 MFSD10Q14728 455 aa15.4■□□□□ 0.06
VCL-205ENST00000478896 HOMER1Q86YM7 354 aa15.4■□□□□ 0.06
VCL-205ENST00000478896 DHX37Q8IY37 1157 aaKnown RBP15.4■□□□□ 0.06
VCL-205ENST00000478896 PPTC7Q8NI37 304 aa15.4■□□□□ 0.06
VCL-205ENST00000478896 KAT2BQ92831 832 aa15.4■□□□□ 0.06
VCL-205ENST00000478896 HDAC6Q9UBN7 1215 aa15.4■□□□□ 0.06
VCL-205ENST00000478896 COL4A4P53420 1690 aaPredicted RBP15.4■□□□□ 0.06
VCL-205ENST00000478896 TCF20Q9UGU0 1960 aaKnown RBP15.39■□□□□ 0.05
VCL-205ENST00000478896 ERICH2A1L162 156 aa15.39■□□□□ 0.05
VCL-205ENST00000478896 ZBTB5O15062 677 aa15.39■□□□□ 0.05
VCL-205ENST00000478896 SORBS3O60504 671 aa15.39■□□□□ 0.05
VCL-205ENST00000478896 PARNO95453 639 aaKnown RBP15.39■□□□□ 0.05
VCL-205ENST00000478896 HSD17B4P51659 736 aa15.39■□□□□ 0.05
VCL-205ENST00000478896 KIAA0753Q2KHM9 967 aa15.39■□□□□ 0.05
VCL-205ENST00000478896 AAK1Q2M2I8 961 aa15.39■□□□□ 0.05
VCL-205ENST00000478896 EMID1Q96A84 441 aaPredicted RBP15.39■□□□□ 0.05
VCL-205ENST00000478896 PDCD2LQ9BRP1 358 aa15.39■□□□□ 0.05
VCL-205ENST00000478896 ZBED2Q9BTP6 218 aa15.39■□□□□ 0.05
VCL-205ENST00000478896 IL25Q9H293 177 aa15.39■□□□□ 0.05
VCL-205ENST00000478896 PCDHA1Q9Y5I3 950 aa15.39■□□□□ 0.05
VCL-205ENST00000478896 SPTBN5Q9NRC6 3674 aaKnown RBP15.39■□□□□ 0.05
VCL-205ENST00000478896 EPOPA6NHQ4 379 aa15.38■□□□□ 0.05
VCL-205ENST00000478896 OPLAHO14841 1288 aa15.38■□□□□ 0.05
VCL-205ENST00000478896 F2P00734 622 aa15.38■□□□□ 0.05
VCL-205ENST00000478896 CKBP12277 381 aa15.38■□□□□ 0.05
VCL-205ENST00000478896 HOXA13P31271 388 aaPredicted RBP15.38■□□□□ 0.05
VCL-205ENST00000478896 WDR5P61964 334 aaKnown RBP15.38■□□□□ 0.05
VCL-205ENST00000478896 TAP1Q03518 808 aa15.38■□□□□ 0.05
VCL-205ENST00000478896 PGM5Q15124 567 aa15.38■□□□□ 0.05
VCL-205ENST00000478896 SEC23AQ15436 765 aa15.38■□□□□ 0.05
VCL-205ENST00000478896 CNKSR3Q6P9H4 555 aa15.38■□□□□ 0.05
VCL-205ENST00000478896 CYB5R4Q7L1T6 521 aa15.38■□□□□ 0.05
VCL-205ENST00000478896 DHX38Q92620 1227 aaKnown RBP15.38■□□□□ 0.05
VCL-205ENST00000478896 SPATA33Q96N06 139 aa15.38■□□□□ 0.05
VCL-205ENST00000478896 CTAGE1Q96RT6 745 aa15.38■□□□□ 0.05
VCL-205ENST00000478896 MAP3K20Q9NYL2 800 aaKnown RBP15.38■□□□□ 0.05
VCL-205ENST00000478896 MAD2L2Q9UI95 211 aa15.38■□□□□ 0.05
VCL-205ENST00000478896 MTCH2Q9Y6C9 303 aa15.38■□□□□ 0.05
VCL-205ENST00000478896 PPP1R11O60927 126 aaPredicted RBP15.37■□□□□ 0.05
VCL-205ENST00000478896 ARHGEF15O94989 841 aa15.37■□□□□ 0.05
VCL-205ENST00000478896 GGPS1O95749 300 aa15.37■□□□□ 0.05
VCL-205ENST00000478896 TFF2Q03403 129 aa15.37■□□□□ 0.05
VCL-205ENST00000478896 TRAF1Q13077 416 aa15.37■□□□□ 0.05
VCL-205ENST00000478896 KCNV1Q6PIU1 500 aa15.37■□□□□ 0.05
VCL-205ENST00000478896 RALYLQ86SE5 291 aaKnown RBP15.37■□□□□ 0.05
VCL-205ENST00000478896 RUFY2Q8WXA3 655 aa15.37■□□□□ 0.05
VCL-205ENST00000478896 U3KPZ7 1027 aaPredicted RBP15.37■□□□□ 0.05
VCL-205ENST00000478896 PALM3A6NDB9 673 aaPredicted RBP15.36■□□□□ 0.05
VCL-205ENST00000478896 GCOM1H8Y6P7 765 aaPredicted RBP15.36■□□□□ 0.05
VCL-205ENST00000478896 IFIT3O14879 490 aaKnown RBP15.36■□□□□ 0.05
VCL-205ENST00000478896 NBNO60934 754 aa15.36■□□□□ 0.05
VCL-205ENST00000478896 POLR2MP0CAP2 368 aa15.36■□□□□ 0.05
VCL-205ENST00000478896 CCND2P30279 289 aa15.36■□□□□ 0.05
VCL-205ENST00000478896 DEFB103AP81534 67 aa15.36■□□□□ 0.05
VCL-205ENST00000478896 GHRHRQ02643 423 aa15.36■□□□□ 0.05
VCL-205ENST00000478896 RBL2Q08999 1139 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms