RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 STAM2O75886 525 aa13□□□□□ -0.33
SRRT-211ENST00000478693 SGPL1O95470 568 aa13□□□□□ -0.33
SRRT-211ENST00000478693 KRT2P35908 639 aa13□□□□□ -0.33
SRRT-211ENST00000478693 ZNF76P36508 570 aa13□□□□□ -0.33
SRRT-211ENST00000478693 GJA8P48165 433 aa13□□□□□ -0.33
SRRT-211ENST00000478693 CLK2P49760 499 aaKnown RBP13□□□□□ -0.33
SRRT-211ENST00000478693 GUCY1B3Q02153 619 aa13□□□□□ -0.33
SRRT-211ENST00000478693 TNFAIP2Q03169 654 aa13□□□□□ -0.33
SRRT-211ENST00000478693 TTLL4Q14679 1199 aa13□□□□□ -0.33
SRRT-211ENST00000478693 SAFBQ15424 915 aaKnown RBP eCLIP13□□□□□ -0.33
SRRT-211ENST00000478693 PCNX4Q63HM2 1172 aa13□□□□□ -0.33
SRRT-211ENST00000478693 NLRX1Q86UT6 975 aa13□□□□□ -0.33
SRRT-211ENST00000478693 DAGLBQ8NCG7 672 aa13□□□□□ -0.33
SRRT-211ENST00000478693 SCFD2Q8WU76 684 aa13□□□□□ -0.33
SRRT-211ENST00000478693 SHISA4Q96DD7 197 aa13□□□□□ -0.33
SRRT-211ENST00000478693 PHF20Q9BVI0 1012 aa13□□□□□ -0.33
SRRT-211ENST00000478693 WDR11Q9BZH6 1224 aa13□□□□□ -0.33
SRRT-211ENST00000478693 KATNBL1Q9H079 304 aa13□□□□□ -0.33
SRRT-211ENST00000478693 PDGFCQ9NRA1 345 aa13□□□□□ -0.33
SRRT-211ENST00000478693 GJB4Q9NTQ9 266 aa13□□□□□ -0.33
SRRT-211ENST00000478693 RTEL1Q9NZ71 1219 aa13□□□□□ -0.33
SRRT-211ENST00000478693 SMCHD1A6NHR9 2005 aa13□□□□□ -0.33
SRRT-211ENST00000478693 ZNFX1Q9P2E3 1918 aaKnown RBP13□□□□□ -0.33
SRRT-211ENST00000478693 CCDC194A0A1B0GVG4 234 aa12.99□□□□□ -0.33
SRRT-211ENST00000478693 KBTBD13C9JR72 458 aa12.99□□□□□ -0.33
SRRT-211ENST00000478693 TXNP10599 105 aaKnown RBP12.99□□□□□ -0.33
SRRT-211ENST00000478693 EN2P19622 333 aaPredicted RBP12.99□□□□□ -0.33
SRRT-211ENST00000478693 GJB2P29033 226 aa12.99□□□□□ -0.33
SRRT-211ENST00000478693 ARHGAP4P98171 946 aa12.99□□□□□ -0.33
SRRT-211ENST00000478693 KRT40Q6A162 431 aa12.99□□□□□ -0.33
SRRT-211ENST00000478693 IQSEC1Q6DN90 963 aa12.99□□□□□ -0.33
SRRT-211ENST00000478693 TAPT1Q6NXT6 567 aa12.99□□□□□ -0.33
SRRT-211ENST00000478693 XRRA1Q6P2D8 792 aa12.99□□□□□ -0.33
SRRT-211ENST00000478693 KRT25Q7Z3Z0 450 aa12.99□□□□□ -0.33
SRRT-211ENST00000478693 TLK2Q86UE8 772 aa12.99□□□□□ -0.33
SRRT-211ENST00000478693 VSIG10LQ86VR7 867 aa12.99□□□□□ -0.33
SRRT-211ENST00000478693 OR6J1Q8NGC5 347 aa12.99□□□□□ -0.33
SRRT-211ENST00000478693 SNX21Q969T3 373 aa12.99□□□□□ -0.33
SRRT-211ENST00000478693 AP5M1Q9H0R1 490 aa12.99□□□□□ -0.33
SRRT-211ENST00000478693 FOXD4L1Q9NU39 408 aa12.99□□□□□ -0.33
SRRT-211ENST00000478693 SYNRGQ9UMZ2 1314 aa12.98□□□□□ -0.33
SRRT-211ENST00000478693 NKRFO15226 690 aaKnown RBP eCLIP12.98□□□□□ -0.33
SRRT-211ENST00000478693 DUSP11O75319 330 aaKnown RBP12.98□□□□□ -0.33
SRRT-211ENST00000478693 FARP2O94887 1054 aaPredicted RBP12.98□□□□□ -0.33
SRRT-211ENST00000478693 PGK1P00558 417 aa12.98□□□□□ -0.33
SRRT-211ENST00000478693 MMP1P03956 469 aa12.98□□□□□ -0.33
SRRT-211ENST00000478693 C6orf222P0C671 652 aaPredicted RBP12.98□□□□□ -0.33
SRRT-211ENST00000478693 SMPD1P17405 629 aa12.98□□□□□ -0.33
SRRT-211ENST00000478693 SREBF1P36956 1147 aa12.98□□□□□ -0.33
SRRT-211ENST00000478693 NONOQ15233 471 aaKnown RBP eCLIP12.98□□□□□ -0.33
SRRT-211ENST00000478693 RNF180Q86T96 592 aa12.98□□□□□ -0.33
SRRT-211ENST00000478693 DIS3L2Q8IYB7 885 aaKnown RBP12.98□□□□□ -0.33
SRRT-211ENST00000478693 H3BQV1 296 aa12.97□□□□□ -0.33
SRRT-211ENST00000478693 ADAMTS3O15072 1205 aa12.97□□□□□ -0.33
SRRT-211ENST00000478693 DYNC1LI2O43237 492 aaPredicted RBP12.97□□□□□ -0.33
SRRT-211ENST00000478693 ADCY6O43306 1168 aa12.97□□□□□ -0.33
SRRT-211ENST00000478693 FIBPO43427 364 aa12.97□□□□□ -0.33
SRRT-211ENST00000478693 SORBS3O60504 671 aa12.97□□□□□ -0.33
SRRT-211ENST00000478693 CAPN2P17655 700 aa12.97□□□□□ -0.33
SRRT-211ENST00000478693 MRPS9P82933 396 aaKnown RBP12.97□□□□□ -0.33
SRRT-211ENST00000478693 MTMR1Q13613 665 aa12.97□□□□□ -0.33
SRRT-211ENST00000478693 CUL4AQ13619 759 aa12.97□□□□□ -0.33
SRRT-211ENST00000478693 LY6KQ17RY6 165 aa12.97□□□□□ -0.33
SRRT-211ENST00000478693 DUSP28Q4G0W2 176 aa12.97□□□□□ -0.33
SRRT-211ENST00000478693 GJC2Q5T442 439 aaPredicted RBP12.97□□□□□ -0.33
SRRT-211ENST00000478693 IFFO2Q5TF58 517 aa12.97□□□□□ -0.33
SRRT-211ENST00000478693 LHX8Q68G74 356 aa12.97□□□□□ -0.33
SRRT-211ENST00000478693 KCNV1Q6PIU1 500 aa12.97□□□□□ -0.33
SRRT-211ENST00000478693 PIK3AP1Q6ZUJ8 805 aa12.97□□□□□ -0.33
SRRT-211ENST00000478693 ARRDC4Q8NCT1 418 aa12.97□□□□□ -0.33
SRRT-211ENST00000478693 TBCKQ8TEA7 893 aa12.97□□□□□ -0.33
SRRT-211ENST00000478693 CDHR1Q96JP9 859 aa12.97□□□□□ -0.33
SRRT-211ENST00000478693 PKD2L1Q9P0L9 805 aa12.97□□□□□ -0.33
SRRT-211ENST00000478693 OGDHLQ9ULD0 1010 aa12.97□□□□□ -0.33
SRRT-211ENST00000478693 RBM47A0AV96 593 aaKnown RBP12.96□□□□□ -0.33
SRRT-211ENST00000478693 ZEB2O60315 1214 aa12.96□□□□□ -0.33
SRRT-211ENST00000478693 ARIH2O95376 493 aa12.96□□□□□ -0.33
SRRT-211ENST00000478693 GH1P01241 217 aa12.96□□□□□ -0.33
SRRT-211ENST00000478693 NR5A1Q13285 461 aa12.96□□□□□ -0.33
SRRT-211ENST00000478693 BRDTQ58F21 947 aaPredicted RBP12.96□□□□□ -0.33
SRRT-211ENST00000478693 DHX37Q8IY37 1157 aaKnown RBP12.96□□□□□ -0.33
SRRT-211ENST00000478693 ANKLE1Q8NAG6 615 aa12.96□□□□□ -0.33
SRRT-211ENST00000478693 OXER1Q8TDS5 423 aa12.96□□□□□ -0.33
SRRT-211ENST00000478693 COPS5Q92905 334 aa12.96□□□□□ -0.33
SRRT-211ENST00000478693 GPRASP2Q96D09 838 aa12.96□□□□□ -0.33
SRRT-211ENST00000478693 INPP4AQ96PE3 977 aaPredicted RBP12.96□□□□□ -0.33
SRRT-211ENST00000478693 MXRA8Q9BRK3 442 aa12.96□□□□□ -0.33
SRRT-211ENST00000478693 CRISPLD2Q9H0B8 497 aa12.96□□□□□ -0.33
SRRT-211ENST00000478693 GNEQ9Y223 722 aaKnown RBP12.96□□□□□ -0.33
SRRT-211ENST00000478693 DNM1LO00429 736 aa12.95□□□□□ -0.34
SRRT-211ENST00000478693 RGS20O76081 388 aa12.95□□□□□ -0.34
SRRT-211ENST00000478693 GGPS1O95749 300 aa12.95□□□□□ -0.34
SRRT-211ENST00000478693 UBA1P22314 1058 aaKnown RBP12.95□□□□□ -0.34
SRRT-211ENST00000478693 PTGS1P23219 599 aa12.95□□□□□ -0.34
SRRT-211ENST00000478693 CPT1AP50416 773 aa12.95□□□□□ -0.34
SRRT-211ENST00000478693 SETQ01105 290 aaPredicted RBP12.95□□□□□ -0.34
SRRT-211ENST00000478693 LRRC41Q15345 812 aa12.95□□□□□ -0.34
SRRT-211ENST00000478693 NPY5RQ15761 445 aa12.95□□□□□ -0.34
SRRT-211ENST00000478693 INF2Q27J81 1249 aa12.95□□□□□ -0.34
SRRT-211ENST00000478693 LETM2Q2VYF4 491 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms