RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 TMEM67Q5HYA8 995 aa15.14■□□□□ 0.01
ABCF3-212ENST00000478288 IFIT1BQ5T764 474 aaKnown RBP15.14■□□□□ 0.01
ABCF3-212ENST00000478288 DEFB128Q7Z7B8 93 aa15.14■□□□□ 0.01
ABCF3-212ENST00000478288 AFAP1L1Q8TED9 768 aa15.14■□□□□ 0.01
ABCF3-212ENST00000478288 AFG1LQ8WV93 481 aa15.14■□□□□ 0.01
ABCF3-212ENST00000478288 TBC1D5Q92609 795 aa15.14■□□□□ 0.01
ABCF3-212ENST00000478288 MTMR8Q96EF0 704 aa15.14■□□□□ 0.01
ABCF3-212ENST00000478288 TAAR1Q96RJ0 339 aa15.14■□□□□ 0.01
ABCF3-212ENST00000478288 AMNQ9BXJ7 453 aa15.14■□□□□ 0.01
ABCF3-212ENST00000478288 NOD1Q9Y239 953 aa15.14■□□□□ 0.01
ABCF3-212ENST00000478288 HOXD8P13378 290 aaPredicted RBP15.13■□□□□ 0.01
ABCF3-212ENST00000478288 CASTP20810 708 aaKnown RBP15.13■□□□□ 0.01
ABCF3-212ENST00000478288 TRAF1Q13077 416 aa15.13■□□□□ 0.01
ABCF3-212ENST00000478288 SEC23AQ15436 765 aa15.13■□□□□ 0.01
ABCF3-212ENST00000478288 PTGISQ16647 500 aa15.13■□□□□ 0.01
ABCF3-212ENST00000478288 DGKDQ16760 1214 aa15.13■□□□□ 0.01
ABCF3-212ENST00000478288 ARHGEF16Q5VV41 709 aa15.13■□□□□ 0.01
ABCF3-212ENST00000478288 SEPT14Q6ZU15 432 aa15.13■□□□□ 0.01
ABCF3-212ENST00000478288 PPTC7Q8NI37 304 aa15.13■□□□□ 0.01
ABCF3-212ENST00000478288 KAT2BQ92831 832 aa15.13■□□□□ 0.01
ABCF3-212ENST00000478288 ASB2Q96Q27 587 aa15.13■□□□□ 0.01
ABCF3-212ENST00000478288 CTAGE1Q96RT6 745 aa15.13■□□□□ 0.01
ABCF3-212ENST00000478288 KATNAL1Q9BW62 490 aa15.13■□□□□ 0.01
ABCF3-212ENST00000478288 PXMP2Q9NR77 195 aa15.13■□□□□ 0.01
ABCF3-212ENST00000478288 DDX41Q9UJV9 622 aaKnown RBP15.13■□□□□ 0.01
ABCF3-212ENST00000478288 TNFRSF10AO00220 468 aa15.12■□□□□ 0.01
ABCF3-212ENST00000478288 OPLAHO14841 1288 aa15.12■□□□□ 0.01
ABCF3-212ENST00000478288 ZBTB5O15062 677 aa15.12■□□□□ 0.01
ABCF3-212ENST00000478288 DHX16O60231 1041 aaKnown RBP15.12■□□□□ 0.01
ABCF3-212ENST00000478288 F2P00734 622 aa15.12■□□□□ 0.01
ABCF3-212ENST00000478288 CA3P07451 260 aa15.12■□□□□ 0.01
ABCF3-212ENST00000478288 MYOGP15173 224 aa15.12■□□□□ 0.01
ABCF3-212ENST00000478288 IGFBP4P22692 258 aa15.12■□□□□ 0.01
ABCF3-212ENST00000478288 MRPS5P82675 430 aaKnown RBP15.12■□□□□ 0.01
ABCF3-212ENST00000478288 LAMC2Q13753 1193 aa15.12■□□□□ 0.01
ABCF3-212ENST00000478288 LY6KQ17RY6 165 aa15.12■□□□□ 0.01
ABCF3-212ENST00000478288 KCNV1Q6PIU1 500 aa15.12■□□□□ 0.01
ABCF3-212ENST00000478288 TSPYL2Q9H2G4 693 aaPredicted RBP15.12■□□□□ 0.01
ABCF3-212ENST00000478288 GTF2IRD1Q9UHL9 959 aa15.12■□□□□ 0.01
ABCF3-212ENST00000478288 PALM3A6NDB9 673 aaPredicted RBP15.11■□□□□ 0.01
ABCF3-212ENST00000478288 KLRF2D3W0D1 207 aa15.11■□□□□ 0.01
ABCF3-212ENST00000478288 NR3C2P08235 984 aa15.11■□□□□ 0.01
ABCF3-212ENST00000478288 EIF2AK2P19525 551 aaKnown RBP15.11■□□□□ 0.01
ABCF3-212ENST00000478288 GDF6Q6KF10 455 aaPredicted RBP15.11■□□□□ 0.01
ABCF3-212ENST00000478288 STOX1Q6ZVD7 989 aa15.11■□□□□ 0.01
ABCF3-212ENST00000478288 HERC6Q8IVU3 1022 aa15.11■□□□□ 0.01
ABCF3-212ENST00000478288 PPM1EQ8WY54 764 aa15.11■□□□□ 0.01
ABCF3-212ENST00000478288 MAD2L2Q9UI95 211 aa15.11■□□□□ 0.01
ABCF3-212ENST00000478288 MRVI1Q9Y6F6 885 aa15.11■□□□□ 0.01
ABCF3-212ENST00000478288 KIF28PB7ZC32 967 aa15.1■□□□□ 0.01
ABCF3-212ENST00000478288 HAS3O00219 553 aa15.1■□□□□ 0.01
ABCF3-212ENST00000478288 CFBP00751 764 aa15.1■□□□□ 0.01
ABCF3-212ENST00000478288 CXCL10P02778 98 aa15.1■□□□□ 0.01
ABCF3-212ENST00000478288 TGFB3P10600 412 aa15.1■□□□□ 0.01
ABCF3-212ENST00000478288 SELPP16109 830 aa15.1■□□□□ 0.01
ABCF3-212ENST00000478288 TRDNQ13061 729 aa15.1■□□□□ 0.01
ABCF3-212ENST00000478288 LRRC8DQ7L1W4 858 aa15.1■□□□□ 0.01
ABCF3-212ENST00000478288 STAG2Q8N3U4 1231 aa15.1■□□□□ 0.01
ABCF3-212ENST00000478288 EXOC6Q8TAG9 804 aa15.1■□□□□ 0.01
ABCF3-212ENST00000478288 PDCD2LQ9BRP1 358 aa15.1■□□□□ 0.01
ABCF3-212ENST00000478288 FTOQ9C0B1 505 aaKnown RBP eCLIP15.1■□□□□ 0.01
ABCF3-212ENST00000478288 IL25Q9H293 177 aa15.1■□□□□ 0.01
ABCF3-212ENST00000478288 PCDHA1Q9Y5I3 950 aa15.1■□□□□ 0.01
ABCF3-212ENST00000478288 U3KPZ7 1027 aaPredicted RBP15.1■□□□□ 0.01
ABCF3-212ENST00000478288 MICAL3Q7RTP6 2002 aa15.09■□□□□ 0.01
ABCF3-212ENST00000478288 PPP1R11O60927 126 aaPredicted RBP15.09■□□□□ 0.01
ABCF3-212ENST00000478288 EFCAB14O75071 495 aa15.09■□□□□ 0.01
ABCF3-212ENST00000478288 PPFIA4O75335 1185 aa15.09■□□□□ 0.01
ABCF3-212ENST00000478288 KCNJ6P48051 423 aa15.09■□□□□ 0.01
ABCF3-212ENST00000478288 PSEN2P49810 448 aa15.09■□□□□ 0.01
ABCF3-212ENST00000478288 GPNMBQ14956 572 aa15.09■□□□□ 0.01
ABCF3-212ENST00000478288 VSIG10LQ86VR7 867 aa15.09■□□□□ 0.01
ABCF3-212ENST00000478288 C7orf31Q8N865 590 aa15.09■□□□□ 0.01
ABCF3-212ENST00000478288 DHX38Q92620 1227 aaKnown RBP15.09■□□□□ 0.01
ABCF3-212ENST00000478288 RIOX1Q9H6W3 641 aa15.09■□□□□ 0.01
ABCF3-212ENST00000478288 VAT1LQ9HCJ6 419 aa15.09■□□□□ 0.01
ABCF3-212ENST00000478288 TCF20Q9UGU0 1960 aaKnown RBP15.09■□□□□ 0.01
ABCF3-212ENST00000478288 GTPBP6O43824 516 aaPredicted RBP15.08■□□□□ 0
ABCF3-212ENST00000478288 RGS20O76081 388 aa15.08■□□□□ 0
ABCF3-212ENST00000478288 CKBP12277 381 aa15.08■□□□□ 0
ABCF3-212ENST00000478288 GSPT1P15170 499 aaKnown RBP15.08■□□□□ 0
ABCF3-212ENST00000478288 TAP1Q03518 808 aa15.08■□□□□ 0
ABCF3-212ENST00000478288 PTK7Q13308 1070 aa15.08■□□□□ 0
ABCF3-212ENST00000478288 MFSD10Q14728 455 aa15.08■□□□□ 0
ABCF3-212ENST00000478288 GRM4Q14833 912 aa15.08■□□□□ 0
ABCF3-212ENST00000478288 CCDC85BQ15834 202 aaPredicted RBP15.08■□□□□ 0
ABCF3-212ENST00000478288 AAK1Q2M2I8 961 aa15.08■□□□□ 0
ABCF3-212ENST00000478288 TTC22Q5TAA0 569 aa15.08■□□□□ 0
ABCF3-212ENST00000478288 MYSM1Q5VVJ2 828 aa15.08■□□□□ 0
ABCF3-212ENST00000478288 CNKSR3Q6P9H4 555 aa15.08■□□□□ 0
ABCF3-212ENST00000478288 CYB5R4Q7L1T6 521 aa15.08■□□□□ 0
ABCF3-212ENST00000478288 CHST3Q7LGC8 479 aa15.08■□□□□ 0
ABCF3-212ENST00000478288 DHX37Q8IY37 1157 aaKnown RBP15.08■□□□□ 0
ABCF3-212ENST00000478288 ADAMTS19Q8TE59 1207 aa15.08■□□□□ 0
ABCF3-212ENST00000478288 PPP1R13LQ8WUF5 828 aa15.08■□□□□ 0
ABCF3-212ENST00000478288 RUFY2Q8WXA3 655 aa15.08■□□□□ 0
ABCF3-212ENST00000478288 HDAC6Q9UBN7 1215 aa15.08■□□□□ 0
ABCF3-212ENST00000478288 MTCH2Q9Y6C9 303 aa15.08■□□□□ 0
ABCF3-212ENST00000478288 COL4A4P53420 1690 aaPredicted RBP15.08■□□□□ 0
ABCF3-212ENST00000478288 KAT6AQ92794 2004 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms