RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 GPCPD1Q9NPB8 672 aa11.57□□□□□ -0.56
COL4A5-204ENST00000477429 PTPDC1A2A3K4 754 aa11.56□□□□□ -0.56
COL4A5-204ENST00000477429 LINC01553A4QN01 128 aa11.56□□□□□ -0.56
COL4A5-204ENST00000477429 PITPNM1O00562 1244 aa11.56□□□□□ -0.56
COL4A5-204ENST00000477429 FLNBO75369 2602 aaKnown RBP11.56□□□□□ -0.56
COL4A5-204ENST00000477429 RFC2P35250 354 aa11.56□□□□□ -0.56
COL4A5-204ENST00000477429 RPS6P62753 249 aaKnown RBP11.56□□□□□ -0.56
COL4A5-204ENST00000477429 CCDC96Q2M329 555 aa11.56□□□□□ -0.56
COL4A5-204ENST00000477429 ZMYM1Q5SVZ6 1142 aa11.56□□□□□ -0.56
COL4A5-204ENST00000477429 FAM117BQ6P1L5 589 aa11.56□□□□□ -0.56
COL4A5-204ENST00000477429 NFRKBQ6P4R8 1299 aa11.56□□□□□ -0.56
COL4A5-204ENST00000477429 CCDC62Q6P9F0 684 aa11.56□□□□□ -0.56
COL4A5-204ENST00000477429 BTNL9Q6UXG8 535 aa11.56□□□□□ -0.56
COL4A5-204ENST00000477429 FAM178BQ8IXR5 827 aa11.56□□□□□ -0.56
COL4A5-204ENST00000477429 PI4K2BQ8TCG2 481 aa11.56□□□□□ -0.56
COL4A5-204ENST00000477429 CPVLQ9H3G5 476 aa11.56□□□□□ -0.56
COL4A5-204ENST00000477429 UBE2ZQ9H832 354 aaPredicted RBP11.56□□□□□ -0.56
COL4A5-204ENST00000477429 FAM86C1Q9NVL1 165 aa11.56□□□□□ -0.56
COL4A5-204ENST00000477429 COL20A1Q9P218 1284 aa11.56□□□□□ -0.56
COL4A5-204ENST00000477429 TRIP12Q14669 1992 aaPredicted RBP11.56□□□□□ -0.56
COL4A5-204ENST00000477429 PLXNA3P51805 1871 aa11.55□□□□□ -0.56
COL4A5-204ENST00000477429 ACTN1P12814 892 aa11.55□□□□□ -0.56
COL4A5-204ENST00000477429 GNAT2P19087 354 aa11.55□□□□□ -0.56
COL4A5-204ENST00000477429 CPT1AP50416 773 aa11.55□□□□□ -0.56
COL4A5-204ENST00000477429 ZNF200P98182 395 aaPredicted RBP11.55□□□□□ -0.56
COL4A5-204ENST00000477429 PDE4BQ07343 736 aa11.55□□□□□ -0.56
COL4A5-204ENST00000477429 PTGISQ16647 500 aa11.55□□□□□ -0.56
COL4A5-204ENST00000477429 TRIM71Q2Q1W2 868 aaKnown RBP11.55□□□□□ -0.56
COL4A5-204ENST00000477429 SYDE2Q5VT97 1194 aa11.55□□□□□ -0.56
COL4A5-204ENST00000477429 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.55□□□□□ -0.56
COL4A5-204ENST00000477429 HFE2Q6ZVN8 426 aa11.55□□□□□ -0.56
COL4A5-204ENST00000477429 AFG1LQ8WV93 481 aa11.55□□□□□ -0.56
COL4A5-204ENST00000477429 TMEM47Q9BQJ4 181 aa11.55□□□□□ -0.56
COL4A5-204ENST00000477429 C17orf80Q9BSJ5 609 aa11.55□□□□□ -0.56
COL4A5-204ENST00000477429 NAPBQ9H115 298 aa11.55□□□□□ -0.56
COL4A5-204ENST00000477429 TSPY2A6NKD2 308 aa11.54□□□□□ -0.56
COL4A5-204ENST00000477429 CXCL10P02778 98 aa11.54□□□□□ -0.56
COL4A5-204ENST00000477429 TXNP10599 105 aaKnown RBP11.54□□□□□ -0.56
COL4A5-204ENST00000477429 HOXB3P14651 431 aaPredicted RBP11.54□□□□□ -0.56
COL4A5-204ENST00000477429 KCNA5P22460 613 aa11.54□□□□□ -0.56
COL4A5-204ENST00000477429 ID4P47928 161 aa11.54□□□□□ -0.56
COL4A5-204ENST00000477429 ERVK-21P61565 698 aa11.54□□□□□ -0.56
COL4A5-204ENST00000477429 ARHGAP1Q07960 439 aa11.54□□□□□ -0.56
COL4A5-204ENST00000477429 ACAP1Q15027 740 aa11.54□□□□□ -0.56
COL4A5-204ENST00000477429 PPP2R5BQ15173 497 aa11.54□□□□□ -0.56
COL4A5-204ENST00000477429 LY6KQ17RY6 165 aa11.54□□□□□ -0.56
COL4A5-204ENST00000477429 IER5LQ5T953 404 aa11.54□□□□□ -0.56
COL4A5-204ENST00000477429 RNF207Q6ZRF8 634 aa11.54□□□□□ -0.56
COL4A5-204ENST00000477429 MIER1Q8N108 512 aa11.54□□□□□ -0.56
COL4A5-204ENST00000477429 RETREG2Q8NC44 543 aa11.54□□□□□ -0.56
COL4A5-204ENST00000477429 DCTPP1Q9H773 170 aa11.54□□□□□ -0.56
COL4A5-204ENST00000477429 ZNF287Q9HBT7 754 aa11.54□□□□□ -0.56
COL4A5-204ENST00000477429 GPHNQ9NQX3 736 aaPredicted RBP11.54□□□□□ -0.56
COL4A5-204ENST00000477429 COL4A6Q14031 1691 aa11.53□□□□□ -0.56
COL4A5-204ENST00000477429 RANBP6O60518 1105 aaKnown RBP11.53□□□□□ -0.56
COL4A5-204ENST00000477429 BAIAP3O94812 1187 aa11.53□□□□□ -0.56
COL4A5-204ENST00000477429 GJB5O95377 273 aa11.53□□□□□ -0.56
COL4A5-204ENST00000477429 ZFYP08048 801 aaPredicted RBP11.53□□□□□ -0.56
COL4A5-204ENST00000477429 MMP3P08254 477 aa11.53□□□□□ -0.56
COL4A5-204ENST00000477429 CKBP12277 381 aa11.53□□□□□ -0.56
COL4A5-204ENST00000477429 PDE4DQ08499 809 aa11.53□□□□□ -0.56
COL4A5-204ENST00000477429 TCF15Q12870 199 aa11.53□□□□□ -0.56
COL4A5-204ENST00000477429 LRRC8DQ7L1W4 858 aa11.53□□□□□ -0.56
COL4A5-204ENST00000477429 GJD3Q8N144 294 aa11.53□□□□□ -0.56
COL4A5-204ENST00000477429 DCAF4Q8WV16 495 aa11.53□□□□□ -0.56
COL4A5-204ENST00000477429 HDAC6Q9UBN7 1215 aa11.53□□□□□ -0.56
COL4A5-204ENST00000477429 ADD3Q9UEY8 706 aaKnown RBP11.53□□□□□ -0.56
COL4A5-204ENST00000477429 VPS13AQ96RL7 3174 aa11.53□□□□□ -0.56
COL4A5-204ENST00000477429 FAM208BQ5VWN6 2430 aa11.52□□□□□ -0.56
COL4A5-204ENST00000477429 KIF28PB7ZC32 967 aa11.52□□□□□ -0.57
COL4A5-204ENST00000477429 H3BQ06 376 aaPredicted RBP11.52□□□□□ -0.57
COL4A5-204ENST00000477429 FGRP09769 529 aa11.52□□□□□ -0.57
COL4A5-204ENST00000477429 GOLGA8HP0CJ92 632 aa11.52□□□□□ -0.57
COL4A5-204ENST00000477429 PDHBP11177 359 aa11.52□□□□□ -0.57
COL4A5-204ENST00000477429 SELPP16109 830 aa11.52□□□□□ -0.57
COL4A5-204ENST00000477429 KCNJ6P48051 423 aa11.52□□□□□ -0.57
COL4A5-204ENST00000477429 PTPN11Q06124 597 aaPredicted RBP11.52□□□□□ -0.57
COL4A5-204ENST00000477429 BFSP2Q13515 415 aa11.52□□□□□ -0.57
COL4A5-204ENST00000477429 LEXMQ3ZCV2 418 aa11.52□□□□□ -0.57
COL4A5-204ENST00000477429 ZNF618Q5T7W0 954 aa11.52□□□□□ -0.57
COL4A5-204ENST00000477429 CHST3Q7LGC8 479 aa11.52□□□□□ -0.57
COL4A5-204ENST00000477429 AFAP1L1Q8TED9 768 aa11.52□□□□□ -0.57
COL4A5-204ENST00000477429 SCFD2Q8WU76 684 aa11.52□□□□□ -0.57
COL4A5-204ENST00000477429 TAAR1Q96RJ0 339 aa11.52□□□□□ -0.57
COL4A5-204ENST00000477429 TGS1Q96RS0 853 aaKnown RBP11.52□□□□□ -0.57
COL4A5-204ENST00000477429 MYO7AQ13402 2215 aa11.51□□□□□ -0.57
COL4A5-204ENST00000477429 ORC4O43929 436 aa11.51□□□□□ -0.57
COL4A5-204ENST00000477429 SORBS3O60504 671 aa11.51□□□□□ -0.57
COL4A5-204ENST00000477429 LGR5O75473 907 aa11.51□□□□□ -0.57
COL4A5-204ENST00000477429 ZNF286BP0CG31 522 aa11.51□□□□□ -0.57
COL4A5-204ENST00000477429 RBL2Q08999 1139 aa11.51□□□□□ -0.57
COL4A5-204ENST00000477429 USH1GQ495M9 461 aa11.51□□□□□ -0.57
COL4A5-204ENST00000477429 CNKSR3Q6P9H4 555 aa11.51□□□□□ -0.57
COL4A5-204ENST00000477429 SEPT14Q6ZU15 432 aa11.51□□□□□ -0.57
COL4A5-204ENST00000477429 SESTD1Q86VW0 696 aa11.51□□□□□ -0.57
COL4A5-204ENST00000477429 SYTL5Q8TDW5 730 aaPredicted RBP11.51□□□□□ -0.57
COL4A5-204ENST00000477429 RAD9AQ99638 391 aa11.51□□□□□ -0.57
COL4A5-204ENST00000477429 ALG1Q9BT22 464 aa11.51□□□□□ -0.57
COL4A5-204ENST00000477429 ZBED2Q9BTP6 218 aa11.51□□□□□ -0.57
COL4A5-204ENST00000477429 FSD1Q9BTV5 496 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms