RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 SESTD1Q86VW0 696 aa29.06■■■□□ 2.24
TMEM54-205ENST00000475208 HERC6Q8IVU3 1022 aa29.06■■■□□ 2.24
TMEM54-205ENST00000475208 CAGE1Q8TC20 777 aa29.06■■■□□ 2.24
TMEM54-205ENST00000475208 KAT2BQ92831 832 aa29.06■■■□□ 2.24
TMEM54-205ENST00000475208 CTAGE1Q96RT6 745 aa29.06■■■□□ 2.24
TMEM54-205ENST00000475208 UHRF1Q96T88 793 aaPredicted RBP29.06■■■□□ 2.24
TMEM54-205ENST00000475208 MYH6P13533 1939 aa29.05■■■□□ 2.24
TMEM54-205ENST00000475208 KIAA1217Q5T5P2 1943 aa29.05■■■□□ 2.24
TMEM54-205ENST00000475208 IGHDP01880 384 aa29.05■■■□□ 2.24
TMEM54-205ENST00000475208 CASTP20810 708 aaKnown RBP29.05■■■□□ 2.24
TMEM54-205ENST00000475208 ARHGEF16Q5VV41 709 aa29.05■■■□□ 2.24
TMEM54-205ENST00000475208 AFAP1L1Q8TED9 768 aa29.05■■■□□ 2.24
TMEM54-205ENST00000475208 KRT23Q9C075 422 aa29.05■■■□□ 2.24
TMEM54-205ENST00000475208 REV3LO60673 3130 aa29.05■■■□□ 2.24
TMEM54-205ENST00000475208 TET1Q8NFU7 2136 aa29.05■■■□□ 2.24
TMEM54-205ENST00000475208 TRANK1O15050 2925 aa29.04■■■□□ 2.24
TMEM54-205ENST00000475208 GTPBP6O43824 516 aaPredicted RBP29.04■■■□□ 2.24
TMEM54-205ENST00000475208 BAIAP3O94812 1187 aa29.04■■■□□ 2.24
TMEM54-205ENST00000475208 ARHGEF15O94989 841 aa29.04■■■□□ 2.24
TMEM54-205ENST00000475208 UBAC1Q9BSL1 405 aa29.04■■■□□ 2.24
TMEM54-205ENST00000475208 CTNNA3Q9UI47 895 aa29.04■■■□□ 2.24
TMEM54-205ENST00000475208 EPOPA6NHQ4 379 aa29.03■■■□□ 2.24
TMEM54-205ENST00000475208 KIF28PB7ZC32 967 aa29.03■■■□□ 2.24
TMEM54-205ENST00000475208 CFBP00751 764 aa29.03■■■□□ 2.24
TMEM54-205ENST00000475208 SKIV2LQ15477 1246 aaKnown RBP29.03■■■□□ 2.24
TMEM54-205ENST00000475208 DGKDQ16760 1214 aa29.03■■■□□ 2.24
TMEM54-205ENST00000475208 DHX38Q92620 1227 aaKnown RBP29.03■■■□□ 2.24
TMEM54-205ENST00000475208 CNNM2Q9H8M5 875 aa29.03■■■□□ 2.24
TMEM54-205ENST00000475208 PXMP2Q9NR77 195 aa29.03■■■□□ 2.24
TMEM54-205ENST00000475208 DDX41Q9UJV9 622 aaKnown RBP29.03■■■□□ 2.24
TMEM54-205ENST00000475208 MTCH2Q9Y6C9 303 aa29.03■■■□□ 2.24
TMEM54-205ENST00000475208 TRIP12Q14669 1992 aaPredicted RBP29.02■■■□□ 2.24
TMEM54-205ENST00000475208 EIF3JO75822 258 aaKnown RBP29.02■■■□□ 2.24
TMEM54-205ENST00000475208 NR3C2P08235 984 aa29.02■■■□□ 2.24
TMEM54-205ENST00000475208 TAP1Q03518 808 aa29.02■■■□□ 2.24
TMEM54-205ENST00000475208 LRRC8DQ7L1W4 858 aa29.02■■■□□ 2.24
TMEM54-205ENST00000475208 ARNTL2Q8WYA1 636 aa29.02■■■□□ 2.24
TMEM54-205ENST00000475208 MRVI1Q9Y6F6 885 aa29.02■■■□□ 2.24
TMEM54-205ENST00000475208 SELPP16109 830 aa29.01■■■□□ 2.23
TMEM54-205ENST00000475208 POU3F3P20264 500 aaPredicted RBP29.01■■■□□ 2.23
TMEM54-205ENST00000475208 KCNJ6P48051 423 aa29.01■■■□□ 2.23
TMEM54-205ENST00000475208 IFIT1BQ5T764 474 aaKnown RBP29.01■■■□□ 2.23
TMEM54-205ENST00000475208 STAG2Q8N3U4 1231 aa29.01■■■□□ 2.23
TMEM54-205ENST00000475208 EMID1Q96A84 441 aaPredicted RBP29.01■■■□□ 2.23
TMEM54-205ENST00000475208 AMNQ9BXJ7 453 aa29.01■■■□□ 2.23
TMEM54-205ENST00000475208 HDAC6Q9UBN7 1215 aa29.01■■■□□ 2.23
TMEM54-205ENST00000475208 GTF2IRD1Q9UHL9 959 aa29.01■■■□□ 2.23
TMEM54-205ENST00000475208 PRRC2BQ5JSZ5 2229 aaKnown RBP29■■■□□ 2.23
TMEM54-205ENST00000475208 OPLAHO14841 1288 aa29■■■□□ 2.23
TMEM54-205ENST00000475208 PSEN2P49810 448 aa29■■■□□ 2.23
TMEM54-205ENST00000475208 HSD17B4P51659 736 aa29■■■□□ 2.23
TMEM54-205ENST00000475208 TFF2Q03403 129 aa29■■■□□ 2.23
TMEM54-205ENST00000475208 GPNMBQ14956 572 aa29■■■□□ 2.23
TMEM54-205ENST00000475208 C7orf31Q8N865 590 aa29■■■□□ 2.23
TMEM54-205ENST00000475208 KATNAL1Q9BW62 490 aa29■■■□□ 2.23
TMEM54-205ENST00000475208 XIRP2A4UGR9 3374 aa28.99■■■□□ 2.23
TMEM54-205ENST00000475208 PTPRSQ13332 1948 aa28.99■■■□□ 2.23
TMEM54-205ENST00000475208 TLL1O43897 1013 aa28.99■■■□□ 2.23
TMEM54-205ENST00000475208 ZNF286BP0CG31 522 aa28.99■■■□□ 2.23
TMEM54-205ENST00000475208 WDR5P61964 334 aaKnown RBP28.99■■■□□ 2.23
TMEM54-205ENST00000475208 RBL2Q08999 1139 aa28.99■■■□□ 2.23
TMEM54-205ENST00000475208 LAMC2Q13753 1193 aa28.99■■■□□ 2.23
TMEM54-205ENST00000475208 PPTC7Q8NI37 304 aa28.99■■■□□ 2.23
TMEM54-205ENST00000475208 ALG1Q9BT22 464 aa28.99■■■□□ 2.23
TMEM54-205ENST00000475208 F2P00734 622 aa28.98■■■□□ 2.23
TMEM54-205ENST00000475208 MFSD10Q14728 455 aa28.98■■■□□ 2.23
TMEM54-205ENST00000475208 AAK1Q2M2I8 961 aa28.98■■■□□ 2.23
TMEM54-205ENST00000475208 KRT40Q6A162 431 aa28.98■■■□□ 2.23
TMEM54-205ENST00000475208 DHX37Q8IY37 1157 aaKnown RBP28.98■■■□□ 2.23
TMEM54-205ENST00000475208 IL25Q9H293 177 aa28.98■■■□□ 2.23
TMEM54-205ENST00000475208 NCOR1O75376 2440 aa28.97■■■□□ 2.23
TMEM54-205ENST00000475208 KLRF2D3W0D1 207 aa28.97■■■□□ 2.23
TMEM54-205ENST00000475208 PPP1R11O60927 126 aaPredicted RBP28.97■■■□□ 2.23
TMEM54-205ENST00000475208 PARNO95453 639 aaKnown RBP28.97■■■□□ 2.23
TMEM54-205ENST00000475208 CKBP12277 381 aa28.97■■■□□ 2.23
TMEM54-205ENST00000475208 GHRHRQ02643 423 aa28.97■■■□□ 2.23
TMEM54-205ENST00000475208 SEC23AQ15436 765 aa28.97■■■□□ 2.23
TMEM54-205ENST00000475208 CNKSR3Q6P9H4 555 aa28.97■■■□□ 2.23
TMEM54-205ENST00000475208 MTMR8Q96EF0 704 aa28.97■■■□□ 2.23
TMEM54-205ENST00000475208 NECAB3Q96P71 396 aaPredicted RBP28.97■■■□□ 2.23
TMEM54-205ENST00000475208 PDCD2LQ9BRP1 358 aa28.97■■■□□ 2.23
TMEM54-205ENST00000475208 NBNO60934 754 aa28.96■■■□□ 2.23
TMEM54-205ENST00000475208 MYCLP12524 364 aaPredicted RBP28.96■■■□□ 2.23
TMEM54-205ENST00000475208 BMP1P13497 986 aa28.96■■■□□ 2.23
TMEM54-205ENST00000475208 KIAA0753Q2KHM9 967 aa28.96■■■□□ 2.23
TMEM54-205ENST00000475208 SPRED2Q7Z698 418 aa28.96■■■□□ 2.23
TMEM54-205ENST00000475208 TMCO2Q7Z6W1 182 aaPredicted RBP28.96■■■□□ 2.23
TMEM54-205ENST00000475208 EXOC6Q8TAG9 804 aa28.96■■■□□ 2.23
TMEM54-205ENST00000475208 MAD2L2Q9UI95 211 aa28.96■■■□□ 2.23
TMEM54-205ENST00000475208 HAS3O00219 553 aa28.95■■■□□ 2.22
TMEM54-205ENST00000475208 ZBTB5O15062 677 aa28.95■■■□□ 2.22
TMEM54-205ENST00000475208 CXCL10P02778 98 aa28.95■■■□□ 2.22
TMEM54-205ENST00000475208 COL9A1P20849 921 aa28.95■■■□□ 2.22
TMEM54-205ENST00000475208 KCNQ1P51787 676 aa28.95■■■□□ 2.22
TMEM54-205ENST00000475208 DEFB103AP81534 67 aa28.95■■■□□ 2.22
TMEM54-205ENST00000475208 PTK7Q13308 1070 aa28.95■■■□□ 2.22
TMEM54-205ENST00000475208 CYB5R4Q7L1T6 521 aa28.95■■■□□ 2.22
TMEM54-205ENST00000475208 PCDHA1Q9Y5I3 950 aa28.95■■■□□ 2.22
TMEM54-205ENST00000475208 COL4A4P53420 1690 aaPredicted RBP28.95■■■□□ 2.22
TMEM54-205ENST00000475208 TCF20Q9UGU0 1960 aaKnown RBP28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms