RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 CTDNEP1O95476 244 aa10.56□□□□□ -0.72
CDH23-211ENST00000475158 FDPSP14324 419 aaKnown RBP10.56□□□□□ -0.72
CDH23-211ENST00000475158 PRCPP42785 496 aa10.56□□□□□ -0.72
CDH23-211ENST00000475158 GRIN1Q05586 938 aa10.56□□□□□ -0.72
CDH23-211ENST00000475158 ADCY1Q08828 1119 aa10.56□□□□□ -0.72
CDH23-211ENST00000475158 PAK2Q13177 524 aa10.56□□□□□ -0.72
CDH23-211ENST00000475158 CTTNQ14247 550 aaKnown RBP10.56□□□□□ -0.72
CDH23-211ENST00000475158 TXNRD1Q16881 649 aa10.56□□□□□ -0.72
CDH23-211ENST00000475158 ASPRV1Q53RT3 343 aa10.56□□□□□ -0.72
CDH23-211ENST00000475158 SRGAP1Q7Z6B7 1085 aa10.56□□□□□ -0.72
CDH23-211ENST00000475158 ANKRD35Q8N283 1001 aa10.56□□□□□ -0.72
CDH23-211ENST00000475158 KRT12Q99456 494 aa10.56□□□□□ -0.72
CDH23-211ENST00000475158 SH2D3AQ9BRG2 576 aa10.56□□□□□ -0.72
CDH23-211ENST00000475158 HYOU1Q9Y4L1 999 aa10.56□□□□□ -0.72
CDH23-211ENST00000475158 NCAPD2Q15021 1401 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 BMP3P12645 472 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 NEDD9Q14511 834 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 GALNT17Q6IS24 598 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 CLEC4GQ6UXB4 293 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 DGKHQ86XP1 1220 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 UBL4BQ8N7F7 174 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 MARCH10Q8NA82 808 aaPredicted RBP10.55□□□□□ -0.72
CDH23-211ENST00000475158 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.55□□□□□ -0.72
CDH23-211ENST00000475158 EXOC4Q96A65 974 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 PARD6BQ9BYG5 372 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 NARFQ9UHQ1 456 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 AMFRQ9UKV5 643 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.55□□□□□ -0.72
CDH23-211ENST00000475158 ADAMTS13Q76LX8 1427 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 MESDQ14696 234 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 SEPT2Q15019 361 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 WHAMMP3Q1A5X7 153 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 EAPPQ56P03 285 aaPredicted RBP10.55□□□□□ -0.72
CDH23-211ENST00000475158 AZI2Q9H6S1 392 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 FAM204AQ9H8W3 233 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 IRAK4Q9NWZ3 460 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 GEMIN8Q9NWZ8 242 aaKnown RBP10.55□□□□□ -0.72
CDH23-211ENST00000475158 NEXMIFQ5QGS0 1516 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 NDUFA10O95299 355 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 EIF2AK2P19525 551 aaKnown RBP10.55□□□□□ -0.72
CDH23-211ENST00000475158 CCNE1P24864 410 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 IGBP1P78318 339 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 C2orf54Q08AI8 447 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 CDC37Q16543 378 aaPredicted RBP10.55□□□□□ -0.72
CDH23-211ENST00000475158 BSPRYQ5W0U4 402 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 KRT27Q7Z3Y8 459 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 SRBD1Q8N5C6 995 aaKnown RBP10.55□□□□□ -0.72
CDH23-211ENST00000475158 ANKRD42Q8N9B4 389 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 CCDC17Q96LX7 622 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 BRIP1Q9BX63 1249 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 EMILIN3Q9NT22 766 aa10.55□□□□□ -0.72
CDH23-211ENST00000475158 ATF5Q9Y2D1 282 aaPredicted RBP10.55□□□□□ -0.72
CDH23-211ENST00000475158 USP17L10C9JJH3 530 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 E9PMD0 336 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 GFPT2O94808 682 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 CDC25BP30305 580 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 CTNNA1P35221 906 aaKnown RBP10.54□□□□□ -0.72
CDH23-211ENST00000475158 TRIM28Q13263 835 aaKnown RBP10.54□□□□□ -0.72
CDH23-211ENST00000475158 NFIXQ14938 502 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 CC2D2BQ6DHV5 1058 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 METTL16Q86W50 562 aaKnown RBP10.54□□□□□ -0.72
CDH23-211ENST00000475158 CNKSR1Q969H4 720 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 CCDC97Q96F63 343 aaPredicted RBP10.54□□□□□ -0.72
CDH23-211ENST00000475158 ZNF577Q9BSK1 485 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 EPB41L4AQ9HCS5 686 aaPredicted RBP10.54□□□□□ -0.72
CDH23-211ENST00000475158 MRPL11Q9Y3B7 192 aaKnown RBP10.54□□□□□ -0.72
CDH23-211ENST00000475158 IQSEC2Q5JU85 1478 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 HNRNPDLO14979 420 aaKnown RBP10.54□□□□□ -0.72
CDH23-211ENST00000475158 TDP2O95551 362 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 GUCY2CP25092 1073 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 RASA3Q14644 834 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 SRLQ86TD4 932 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 SLFN12Q8IYM2 578 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 ANKS4BQ8N8V4 417 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 DEPTORQ8TB45 409 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 POMGNT1Q8WZA1 660 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 DDX12PQ92771 950 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 KCNF1Q9H3M0 494 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 NDST4Q9H3R1 872 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 EXOC7Q9UPT5 735 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 IVNS1ABPQ9Y6Y0 642 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 GOLGA8IPA6NC78 632 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 GOLGA8JA6NMD2 632 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 E7EVH7 732 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 PLA2G4BP0C869 781 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 ATF7P17544 494 aaPredicted RBP10.54□□□□□ -0.72
CDH23-211ENST00000475158 EEF1GP26641 437 aaKnown RBP10.54□□□□□ -0.72
CDH23-211ENST00000475158 BRD3Q15059 726 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 ANKRD7Q92527 254 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 MXD3Q9BW11 206 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 SAMD15Q9P1V8 674 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 PTPN22Q9Y2R2 807 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 TTLL3Q9Y4R7 772 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 SETBP1Q9Y6X0 1596 aa10.54□□□□□ -0.72
CDH23-211ENST00000475158 GNGT1P63211 74 aa10.53□□□□□ -0.72
CDH23-211ENST00000475158 MAN2A1Q16706 1144 aa10.53□□□□□ -0.72
CDH23-211ENST00000475158 PFKFB3Q16875 520 aaPredicted RBP10.53□□□□□ -0.72
CDH23-211ENST00000475158 TCP11X2Q5H9J9 407 aa10.53□□□□□ -0.72
CDH23-211ENST00000475158 DHX40Q8IX18 779 aaKnown RBP10.53□□□□□ -0.72
CDH23-211ENST00000475158 IGDCC4Q8TDY8 1250 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms