RNA–Protein interactions for RNA: ENST00000474993.5

NPM3-204, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 2

Gene NPM3, Length 755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-204ENST00000474993 SYNGAP1Q96PV0 1343 aa23.33■■□□□ 1.32
NPM3-204ENST00000474993 NCLP19338 710 aaKnown RBP23.32■■□□□ 1.32
NPM3-204ENST00000474993 FLT3LGP49771 235 aa23.32■■□□□ 1.32
NPM3-204ENST00000474993 IRF5Q13568 498 aa23.32■■□□□ 1.32
NPM3-204ENST00000474993 FOXD4L6Q3SYB3 417 aaPredicted RBP23.32■■□□□ 1.32
NPM3-204ENST00000474993 Q4G0T1 1027 aa23.32■■□□□ 1.32
NPM3-204ENST00000474993 ANO1Q5XXA6 986 aa23.32■■□□□ 1.32
NPM3-204ENST00000474993 FAM173BQ6P4H8 233 aa23.32■■□□□ 1.32
NPM3-204ENST00000474993 FOXD4L3Q6VB84 417 aaPredicted RBP23.32■■□□□ 1.32
NPM3-204ENST00000474993 SCAND2PQ9GZW5 306 aaPredicted RBP23.32■■□□□ 1.32
NPM3-204ENST00000474993 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.32■■□□□ 1.32
NPM3-204ENST00000474993 RTEL1Q9NZ71 1219 aa23.32■■□□□ 1.32
NPM3-204ENST00000474993 DDX25Q9UHL0 483 aaKnown RBP23.32■■□□□ 1.32
NPM3-204ENST00000474993 TSKSQ9UJT2 592 aa23.32■■□□□ 1.32
NPM3-204ENST00000474993 LAD1O00515 517 aa23.31■■□□□ 1.32
NPM3-204ENST00000474993 BAG4O95429 457 aaKnown RBP23.31■■□□□ 1.32
NPM3-204ENST00000474993 MCM7P33993 719 aa23.31■■□□□ 1.32
NPM3-204ENST00000474993 DNM1Q05193 864 aaKnown RBP23.31■■□□□ 1.32
NPM3-204ENST00000474993 ZNF174Q15697 407 aa23.31■■□□□ 1.32
NPM3-204ENST00000474993 CSPP1Q1MSJ5 1256 aa23.31■■□□□ 1.32
NPM3-204ENST00000474993 ARMCX2Q7L311 632 aa23.31■■□□□ 1.32
NPM3-204ENST00000474993 IL31RAQ8NI17 732 aa23.31■■□□□ 1.32
NPM3-204ENST00000474993 NPLOC4Q8TAT6 608 aa23.31■■□□□ 1.32
NPM3-204ENST00000474993 GPRASP2Q96D09 838 aa23.31■■□□□ 1.32
NPM3-204ENST00000474993 FGD4Q96M96 766 aa23.31■■□□□ 1.32
NPM3-204ENST00000474993 MBOAT7Q96N66 472 aa23.31■■□□□ 1.32
NPM3-204ENST00000474993 TINF2Q9BSI4 451 aa23.31■■□□□ 1.32
NPM3-204ENST00000474993 PCDHB6Q9Y5E3 794 aa23.31■■□□□ 1.32
NPM3-204ENST00000474993 UBIAD1Q9Y5Z9 338 aa23.31■■□□□ 1.32
NPM3-204ENST00000474993 MEIS1O00470 390 aa23.3■■□□□ 1.32
NPM3-204ENST00000474993 MARCH6O60337 910 aa23.3■■□□□ 1.32
NPM3-204ENST00000474993 NEMFO60524 1076 aa23.3■■□□□ 1.32
NPM3-204ENST00000474993 YEATS4O95619 227 aa23.3■■□□□ 1.32
NPM3-204ENST00000474993 CTCFP49711 727 aaPredicted RBP23.3■■□□□ 1.32
NPM3-204ENST00000474993 MRPS9P82933 396 aaKnown RBP23.3■■□□□ 1.32
NPM3-204ENST00000474993 PRKCZQ05513 592 aa23.3■■□□□ 1.32
NPM3-204ENST00000474993 SF3A1Q15459 793 aaKnown RBP23.3■■□□□ 1.32
NPM3-204ENST00000474993 PRR16Q569H4 304 aa23.3■■□□□ 1.32
NPM3-204ENST00000474993 KCNV1Q6PIU1 500 aa23.3■■□□□ 1.32
NPM3-204ENST00000474993 PLA2G4DQ86XP0 818 aa23.3■■□□□ 1.32
NPM3-204ENST00000474993 GBP4Q96PP9 640 aa23.3■■□□□ 1.32
NPM3-204ENST00000474993 USP28Q96RU2 1077 aa23.3■■□□□ 1.32
NPM3-204ENST00000474993 JADE2Q9NQC1 790 aa23.3■■□□□ 1.32
NPM3-204ENST00000474993 ASTN1O14525 1302 aa23.3■■□□□ 1.32
NPM3-204ENST00000474993 TBX3O15119 743 aa23.29■■□□□ 1.32
NPM3-204ENST00000474993 TDP2O95551 362 aa23.29■■□□□ 1.32
NPM3-204ENST00000474993 NASPP49321 788 aaPredicted RBP23.29■■□□□ 1.32
NPM3-204ENST00000474993 STK38Q15208 465 aa23.29■■□□□ 1.32
NPM3-204ENST00000474993 MFSD14CQ5VZR4 134 aa23.29■■□□□ 1.32
NPM3-204ENST00000474993 RAET1EQ8TD07 263 aa23.29■■□□□ 1.32
NPM3-204ENST00000474993 INPP4AQ96PE3 977 aaPredicted RBP23.29■■□□□ 1.32
NPM3-204ENST00000474993 VTA1Q9NP79 307 aa23.29■■□□□ 1.32
NPM3-204ENST00000474993 TFIP11Q9UBB9 837 aaKnown RBP23.29■■□□□ 1.32
NPM3-204ENST00000474993 CNPY2Q9Y2B0 182 aa23.29■■□□□ 1.32
NPM3-204ENST00000474993 ZNFX1Q9P2E3 1918 aaKnown RBP23.29■■□□□ 1.32
NPM3-204ENST00000474993 FAM86B1E9PN63 330 aa23.28■■□□□ 1.32
NPM3-204ENST00000474993 FAM86B2P0C5J1 330 aa23.28■■□□□ 1.32
NPM3-204ENST00000474993 CEBPZQ03701 1054 aaKnown RBP23.28■■□□□ 1.32
NPM3-204ENST00000474993 MTMR1Q13613 665 aa23.28■■□□□ 1.32
NPM3-204ENST00000474993 CALCRLQ16602 461 aa23.28■■□□□ 1.32
NPM3-204ENST00000474993 SLFN12Q8IYM2 578 aa23.28■■□□□ 1.32
NPM3-204ENST00000474993 FAM20AQ96MK3 541 aa23.28■■□□□ 1.32
NPM3-204ENST00000474993 ABHD16BQ9H3Z7 469 aa23.28■■□□□ 1.32
NPM3-204ENST00000474993 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.28■■□□□ 1.32
NPM3-204ENST00000474993 NRBP1Q9UHY1 535 aa23.28■■□□□ 1.32
NPM3-204ENST00000474993 GABRQQ9UN88 632 aa23.28■■□□□ 1.32
NPM3-204ENST00000474993 CLIC4Q9Y696 253 aa23.28■■□□□ 1.32
NPM3-204ENST00000474993 MORC2Q9Y6X9 1032 aaPredicted RBP23.28■■□□□ 1.32
NPM3-204ENST00000474993 MGAMO43451 1857 aa23.28■■□□□ 1.32
NPM3-204ENST00000474993 FIBPO43427 364 aa23.27■■□□□ 1.32
NPM3-204ENST00000474993 EDIL3O43854 480 aa23.27■■□□□ 1.32
NPM3-204ENST00000474993 TGFB3P10600 412 aa23.27■■□□□ 1.32
NPM3-204ENST00000474993 ITGB5P18084 799 aa23.27■■□□□ 1.32
NPM3-204ENST00000474993 PTGDRQ13258 359 aa23.27■■□□□ 1.32
NPM3-204ENST00000474993 NBR1Q14596 966 aa23.27■■□□□ 1.32
NPM3-204ENST00000474993 SLC39A14Q15043 492 aa23.27■■□□□ 1.32
NPM3-204ENST00000474993 ARL6IP4Q66PJ3 421 aaKnown RBP23.27■■□□□ 1.32
NPM3-204ENST00000474993 CLEC17AQ6ZS10 378 aa23.27■■□□□ 1.32
NPM3-204ENST00000474993 KCNG4Q8TDN1 519 aa23.27■■□□□ 1.32
NPM3-204ENST00000474993 TRIM17Q9Y577 477 aa23.27■■□□□ 1.32
NPM3-204ENST00000474993 IGLV3-22A0A075B6J6 115 aa23.26■■□□□ 1.31
NPM3-204ENST00000474993 OR52Z1P0C646 297 aa23.26■■□□□ 1.31
NPM3-204ENST00000474993 HSPA1AP0DMV8 641 aaKnown RBP23.26■■□□□ 1.31
NPM3-204ENST00000474993 HSPA1BP0DMV9 641 aaKnown RBP23.26■■□□□ 1.31
NPM3-204ENST00000474993 HSPA8P11142 646 aaKnown RBP23.26■■□□□ 1.31
NPM3-204ENST00000474993 ICAM3P32942 547 aa23.26■■□□□ 1.31
NPM3-204ENST00000474993 PRPHP41219 470 aa23.26■■□□□ 1.31
NPM3-204ENST00000474993 PXYLP1Q8TE99 480 aa23.26■■□□□ 1.31
NPM3-204ENST00000474993 SPATA32Q96LK8 384 aa23.26■■□□□ 1.31
NPM3-204ENST00000474993 RCOR1Q9UKL0 485 aa23.26■■□□□ 1.31
NPM3-204ENST00000474993 SPTLC2O15270 562 aa23.25■■□□□ 1.31
NPM3-204ENST00000474993 FOXN1O15353 648 aa23.25■■□□□ 1.31
NPM3-204ENST00000474993 ATP2C1P98194 919 aaPredicted RBP23.25■■□□□ 1.31
NPM3-204ENST00000474993 SEPT14Q6ZU15 432 aa23.25■■□□□ 1.31
NPM3-204ENST00000474993 OTOP1Q7RTM1 612 aa23.25■■□□□ 1.31
NPM3-204ENST00000474993 LINC00301Q8NCQ3 95 aa23.25■■□□□ 1.31
NPM3-204ENST00000474993 GIMAP8Q8ND71 665 aaPredicted RBP23.25■■□□□ 1.31
NPM3-204ENST00000474993 SCFD2Q8WU76 684 aa23.25■■□□□ 1.31
NPM3-204ENST00000474993 ZNF577Q9BSK1 485 aa23.25■■□□□ 1.31
NPM3-204ENST00000474993 WDR11Q9BZH6 1224 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms