RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 PIGSQ96S52 555 aa13.88□□□□□ -0.19
SMPD4-217ENST00000473720 IWS1Q96ST2 819 aa13.88□□□□□ -0.19
SMPD4-217ENST00000473720 PRDM12Q9H4Q4 367 aa13.88□□□□□ -0.19
SMPD4-217ENST00000473720 MRVI1Q9Y6F6 885 aa13.88□□□□□ -0.19
SMPD4-217ENST00000473720 PALM3A6NDB9 673 aaPredicted RBP13.87□□□□□ -0.19
SMPD4-217ENST00000473720 OPLAHO14841 1288 aa13.87□□□□□ -0.19
SMPD4-217ENST00000473720 NR3C2P08235 984 aa13.87□□□□□ -0.19
SMPD4-217ENST00000473720 ARHGAP1Q07960 439 aa13.87□□□□□ -0.19
SMPD4-217ENST00000473720 GRM4Q14833 912 aa13.87□□□□□ -0.19
SMPD4-217ENST00000473720 RASIP1Q5U651 963 aa13.87□□□□□ -0.19
SMPD4-217ENST00000473720 NFRKBQ6P4R8 1299 aa13.87□□□□□ -0.19
SMPD4-217ENST00000473720 CCDC62Q6P9F0 684 aa13.87□□□□□ -0.19
SMPD4-217ENST00000473720 STOX1Q6ZVD7 989 aa13.87□□□□□ -0.19
SMPD4-217ENST00000473720 RETREG2Q8NC44 543 aa13.87□□□□□ -0.19
SMPD4-217ENST00000473720 GAS2L1Q99501 681 aaPredicted RBP13.87□□□□□ -0.19
SMPD4-217ENST00000473720 ALG1Q9BT22 464 aa13.87□□□□□ -0.19
SMPD4-217ENST00000473720 RBM8AQ9Y5S9 174 aaKnown RBP13.87□□□□□ -0.19
SMPD4-217ENST00000473720 SLC4A7Q9Y6M7 1214 aa13.87□□□□□ -0.19
SMPD4-217ENST00000473720 PRUNE2Q8WUY3 3088 aa13.87□□□□□ -0.19
SMPD4-217ENST00000473720 MICAL3Q7RTP6 2002 aa13.86□□□□□ -0.19
SMPD4-217ENST00000473720 MYOGP15173 224 aa13.86□□□□□ -0.19
SMPD4-217ENST00000473720 CASTP20810 708 aaKnown RBP13.86□□□□□ -0.19
SMPD4-217ENST00000473720 IGFBP4P22692 258 aa13.86□□□□□ -0.19
SMPD4-217ENST00000473720 HSD17B4P51659 736 aa13.86□□□□□ -0.19
SMPD4-217ENST00000473720 PTGISQ16647 500 aa13.86□□□□□ -0.19
SMPD4-217ENST00000473720 CATIPQ7Z7H3 387 aa13.86□□□□□ -0.19
SMPD4-217ENST00000473720 DHX37Q8IY37 1157 aaKnown RBP13.86□□□□□ -0.19
SMPD4-217ENST00000473720 MYL10Q9BUA6 226 aa13.86□□□□□ -0.19
SMPD4-217ENST00000473720 COL25A1Q9BXS0 654 aaPredicted RBP13.86□□□□□ -0.19
SMPD4-217ENST00000473720 FTOQ9C0B1 505 aaKnown RBP eCLIP13.86□□□□□ -0.19
SMPD4-217ENST00000473720 DDX41Q9UJV9 622 aaKnown RBP13.86□□□□□ -0.19
SMPD4-217ENST00000473720 YBX2Q9Y2T7 364 aaKnown RBP13.86□□□□□ -0.19
SMPD4-217ENST00000473720 RBAK-RBAKDNI3L0D1 243 aa13.85□□□□□ -0.19
SMPD4-217ENST00000473720 CYTH3O43739 400 aa13.85□□□□□ -0.19
SMPD4-217ENST00000473720 EIF3JO75822 258 aaKnown RBP13.85□□□□□ -0.19
SMPD4-217ENST00000473720 ZNF286BP0CG31 522 aa13.85□□□□□ -0.19
SMPD4-217ENST00000473720 ANTXR2P58335 489 aa13.85□□□□□ -0.19
SMPD4-217ENST00000473720 PGM5Q15124 567 aa13.85□□□□□ -0.19
SMPD4-217ENST00000473720 RAB30Q15771 203 aa13.85□□□□□ -0.19
SMPD4-217ENST00000473720 DGKDQ16760 1214 aa13.85□□□□□ -0.19
SMPD4-217ENST00000473720 SLC35G1Q2M3R5 365 aa13.85□□□□□ -0.19
SMPD4-217ENST00000473720 GDF6Q6KF10 455 aaPredicted RBP13.85□□□□□ -0.19
SMPD4-217ENST00000473720 CASC1Q6TDU7 716 aa13.85□□□□□ -0.19
SMPD4-217ENST00000473720 NFXL1Q6ZNB6 911 aa13.85□□□□□ -0.19
SMPD4-217ENST00000473720 IL31RAQ8NI17 732 aa13.85□□□□□ -0.19
SMPD4-217ENST00000473720 MTMR8Q96EF0 704 aa13.85□□□□□ -0.19
SMPD4-217ENST00000473720 PDCD2LQ9BRP1 358 aa13.85□□□□□ -0.19
SMPD4-217ENST00000473720 MAF1Q9H063 256 aa13.85□□□□□ -0.19
SMPD4-217ENST00000473720 SLC28A3Q9HAS3 691 aa13.85□□□□□ -0.19
SMPD4-217ENST00000473720 PNMA6FA0A0J9YX94 578 aa13.84□□□□□ -0.19
SMPD4-217ENST00000473720 GCOM1H8Y6P7 765 aaPredicted RBP13.84□□□□□ -0.19
SMPD4-217ENST00000473720 IQCF3P0C7M6 154 aa13.84□□□□□ -0.19
SMPD4-217ENST00000473720 POLR2MP0CAP2 368 aa13.84□□□□□ -0.19
SMPD4-217ENST00000473720 ACTN1P12814 892 aa13.84□□□□□ -0.19
SMPD4-217ENST00000473720 ATP2A2P16615 1042 aaKnown RBP13.84□□□□□ -0.19
SMPD4-217ENST00000473720 PSEN2P49810 448 aa13.84□□□□□ -0.19
SMPD4-217ENST00000473720 PTPN11Q06124 597 aaPredicted RBP13.84□□□□□ -0.19
SMPD4-217ENST00000473720 BFSP2Q13515 415 aa13.84□□□□□ -0.19
SMPD4-217ENST00000473720 CCDC85BQ15834 202 aaPredicted RBP13.84□□□□□ -0.19
SMPD4-217ENST00000473720 SKAP1Q86WV1 359 aa13.84□□□□□ -0.19
SMPD4-217ENST00000473720 C7orf31Q8N865 590 aa13.84□□□□□ -0.19
SMPD4-217ENST00000473720 USP38Q8NB14 1042 aa13.84□□□□□ -0.19
SMPD4-217ENST00000473720 MAP4K1Q92918 833 aa13.84□□□□□ -0.19
SMPD4-217ENST00000473720 VWCEQ96DN2 955 aa13.84□□□□□ -0.19
SMPD4-217ENST00000473720 RIOX1Q9H6W3 641 aa13.84□□□□□ -0.19
SMPD4-217ENST00000473720 NLRC5Q86WI3 1866 aa13.83□□□□□ -0.2
SMPD4-217ENST00000473720 COL4A4P53420 1690 aaPredicted RBP13.83□□□□□ -0.2
SMPD4-217ENST00000473720 PRC1O43663 620 aa13.83□□□□□ -0.2
SMPD4-217ENST00000473720 GGPS1O95749 300 aa13.83□□□□□ -0.2
SMPD4-217ENST00000473720 RXRAP19793 462 aa13.83□□□□□ -0.2
SMPD4-217ENST00000473720 CCND2P30279 289 aa13.83□□□□□ -0.2
SMPD4-217ENST00000473720 TROAPQ12815 778 aa13.83□□□□□ -0.2
SMPD4-217ENST00000473720 LAMC2Q13753 1193 aa13.83□□□□□ -0.2
SMPD4-217ENST00000473720 MFSD10Q14728 455 aa13.83□□□□□ -0.2
SMPD4-217ENST00000473720 PPP2R2DQ66LE6 453 aa13.83□□□□□ -0.2
SMPD4-217ENST00000473720 RAB11FIP4Q86YS3 637 aa13.83□□□□□ -0.2
SMPD4-217ENST00000473720 MB21D2Q8IYB1 491 aaPredicted RBP13.83□□□□□ -0.2
SMPD4-217ENST00000473720 ZNF654Q8IZM8 581 aa13.83□□□□□ -0.2
SMPD4-217ENST00000473720 MICALL1Q8N3F8 863 aa13.83□□□□□ -0.2
SMPD4-217ENST00000473720 CCDC155Q8N6L0 562 aa13.83□□□□□ -0.2
SMPD4-217ENST00000473720 CTCFLQ8NI51 663 aaPredicted RBP13.83□□□□□ -0.2
SMPD4-217ENST00000473720 IGDCC4Q8TDY8 1250 aa13.83□□□□□ -0.2
SMPD4-217ENST00000473720 KAT2BQ92831 832 aa13.83□□□□□ -0.2
SMPD4-217ENST00000473720 GPKOWQ92917 476 aaPredicted RBP eCLIP13.83□□□□□ -0.2
SMPD4-217ENST00000473720 SPATA33Q96N06 139 aa13.83□□□□□ -0.2
SMPD4-217ENST00000473720 PRDM6Q9NQX0 595 aa13.83□□□□□ -0.2
SMPD4-217ENST00000473720 HDAC6Q9UBN7 1215 aa13.83□□□□□ -0.2
SMPD4-217ENST00000473720 CCDC69A6NI79 296 aa13.82□□□□□ -0.2
SMPD4-217ENST00000473720 PITPNM1O00562 1244 aa13.82□□□□□ -0.2
SMPD4-217ENST00000473720 RGS20O76081 388 aa13.82□□□□□ -0.2
SMPD4-217ENST00000473720 PFKMP08237 780 aa13.82□□□□□ -0.2
SMPD4-217ENST00000473720 TRAF1Q13077 416 aa13.82□□□□□ -0.2
SMPD4-217ENST00000473720 KIAA0753Q2KHM9 967 aa13.82□□□□□ -0.2
SMPD4-217ENST00000473720 CMTR1Q8N1G2 835 aaKnown RBP13.82□□□□□ -0.2
SMPD4-217ENST00000473720 PPTC7Q8NI37 304 aa13.82□□□□□ -0.2
SMPD4-217ENST00000473720 KATNAL1Q9BW62 490 aa13.82□□□□□ -0.2
SMPD4-217ENST00000473720 LRRC2Q9BYS8 371 aa13.82□□□□□ -0.2
SMPD4-217ENST00000473720 CERS4Q9HA82 394 aa13.82□□□□□ -0.2
SMPD4-217ENST00000473720 MLXIPQ9HAP2 919 aa13.82□□□□□ -0.2
SMPD4-217ENST00000473720 LY9Q9HBG7 655 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms