RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 TTLL4Q14679 1199 aa8.15□□□□□ -1.1
CKS1B-205ENST00000473344 PPP2R5BQ15173 497 aa8.15□□□□□ -1.1
CKS1B-205ENST00000473344 PWP2Q15269 919 aaKnown RBP8.15□□□□□ -1.1
CKS1B-205ENST00000473344 TMEM63BQ5T3F8 832 aa8.15□□□□□ -1.1
CKS1B-205ENST00000473344 DCAF4Q8WV16 495 aa8.15□□□□□ -1.1
CKS1B-205ENST00000473344 FAM122AQ96E09 287 aa8.15□□□□□ -1.1
CKS1B-205ENST00000473344 PURBQ96QR8 312 aaKnown RBP8.15□□□□□ -1.1
CKS1B-205ENST00000473344 SLC9A7Q96T83 725 aa8.15□□□□□ -1.1
CKS1B-205ENST00000473344 C1QTNF1Q9BXJ1 281 aa8.15□□□□□ -1.1
CKS1B-205ENST00000473344 RANBP17Q9H2T7 1088 aaKnown RBP8.15□□□□□ -1.1
CKS1B-205ENST00000473344 DCTPP1Q9H773 170 aa8.15□□□□□ -1.1
CKS1B-205ENST00000473344 CERS4Q9HA82 394 aa8.15□□□□□ -1.1
CKS1B-205ENST00000473344 MYH7P12883 1935 aa8.14□□□□□ -1.11
CKS1B-205ENST00000473344 B4DLN1 442 aa8.14□□□□□ -1.11
CKS1B-205ENST00000473344 NFIBO00712 420 aa8.14□□□□□ -1.11
CKS1B-205ENST00000473344 NKRFO15226 690 aaKnown RBP eCLIP8.14□□□□□ -1.11
CKS1B-205ENST00000473344 KPNA6O60684 536 aa8.14□□□□□ -1.11
CKS1B-205ENST00000473344 BMP1P13497 986 aa8.14□□□□□ -1.11
CKS1B-205ENST00000473344 MRPL12P52815 198 aaKnown RBP8.14□□□□□ -1.11
CKS1B-205ENST00000473344 BFSP2Q13515 415 aa8.14□□□□□ -1.11
CKS1B-205ENST00000473344 NBPF20Q3BBV1 942 aa8.14□□□□□ -1.11
CKS1B-205ENST00000473344 RRP12Q5JTH9 1297 aaKnown RBP8.14□□□□□ -1.11
CKS1B-205ENST00000473344 C20orf194Q5TEA3 1177 aa8.14□□□□□ -1.11
CKS1B-205ENST00000473344 SYDE2Q5VT97 1194 aa8.14□□□□□ -1.11
CKS1B-205ENST00000473344 TYW1BQ6NUM6 668 aa8.14□□□□□ -1.11
CKS1B-205ENST00000473344 RNF207Q6ZRF8 634 aa8.14□□□□□ -1.11
CKS1B-205ENST00000473344 PHOSPHO2Q8TCD6 241 aa8.14□□□□□ -1.11
CKS1B-205ENST00000473344 MORC4Q8TE76 937 aa8.14□□□□□ -1.11
CKS1B-205ENST00000473344 ARNTL2Q8WYA1 636 aa8.14□□□□□ -1.11
CKS1B-205ENST00000473344 NECAB3Q96P71 396 aaPredicted RBP8.14□□□□□ -1.11
CKS1B-205ENST00000473344 IRX2Q9BZI1 471 aaPredicted RBP8.14□□□□□ -1.11
CKS1B-205ENST00000473344 IL17RBQ9NRM6 502 aa8.14□□□□□ -1.11
CKS1B-205ENST00000473344 DAXXQ9UER7 740 aaPredicted RBP8.14□□□□□ -1.11
CKS1B-205ENST00000473344 RAPGEFL1Q9UHV5 662 aa8.14□□□□□ -1.11
CKS1B-205ENST00000473344 PNMA2Q9UL42 364 aa8.14□□□□□ -1.11
CKS1B-205ENST00000473344 COG5Q9UP83 839 aa8.14□□□□□ -1.11
CKS1B-205ENST00000473344 FRMPD2Q68DX3 1309 aaPredicted RBP8.13□□□□□ -1.11
CKS1B-205ENST00000473344 RFXAPO00287 272 aa8.13□□□□□ -1.11
CKS1B-205ENST00000473344 TLL1O43897 1013 aa8.13□□□□□ -1.11
CKS1B-205ENST00000473344 IQCF3P0C7M6 154 aa8.13□□□□□ -1.11
CKS1B-205ENST00000473344 PLA2G5P39877 138 aa8.13□□□□□ -1.11
CKS1B-205ENST00000473344 KCNJ6P48051 423 aa8.13□□□□□ -1.11
CKS1B-205ENST00000473344 KCNQ1P51787 676 aa8.13□□□□□ -1.11
CKS1B-205ENST00000473344 ZMYM1Q5SVZ6 1142 aa8.13□□□□□ -1.11
CKS1B-205ENST00000473344 TTBK2Q6IQ55 1244 aa8.13□□□□□ -1.11
CKS1B-205ENST00000473344 NFRKBQ6P4R8 1299 aa8.13□□□□□ -1.11
CKS1B-205ENST00000473344 SLC30A10Q6XR72 485 aa8.13□□□□□ -1.11
CKS1B-205ENST00000473344 RASGRP2Q7LDG7 609 aa8.13□□□□□ -1.11
CKS1B-205ENST00000473344 HERC6Q8IVU3 1022 aa8.13□□□□□ -1.11
CKS1B-205ENST00000473344 CCDC155Q8N6L0 562 aa8.13□□□□□ -1.11
CKS1B-205ENST00000473344 PI4K2BQ8TCG2 481 aa8.13□□□□□ -1.11
CKS1B-205ENST00000473344 SCFD2Q8WU76 684 aa8.13□□□□□ -1.11
CKS1B-205ENST00000473344 GPCPD1Q9NPB8 672 aa8.13□□□□□ -1.11
CKS1B-205ENST00000473344 INCENPQ9NQS7 918 aa8.13□□□□□ -1.11
CKS1B-205ENST00000473344 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.13□□□□□ -1.11
CKS1B-205ENST00000473344 HCN4Q9Y3Q4 1203 aa8.13□□□□□ -1.11
CKS1B-205ENST00000473344 PCDHGA10Q9Y5H3 936 aa8.13□□□□□ -1.11
CKS1B-205ENST00000473344 MTCH2Q9Y6C9 303 aa8.13□□□□□ -1.11
CKS1B-205ENST00000473344 MYH4Q9Y623 1939 aa8.13□□□□□ -1.11
CKS1B-205ENST00000473344 RBM47A0AV96 593 aaKnown RBP8.12□□□□□ -1.11
CKS1B-205ENST00000473344 A6NJR5 290 aa8.12□□□□□ -1.11
CKS1B-205ENST00000473344 BAIAP3O94812 1187 aa8.12□□□□□ -1.11
CKS1B-205ENST00000473344 TXNP10599 105 aaKnown RBP8.12□□□□□ -1.11
CKS1B-205ENST00000473344 TOP1P11387 765 aaKnown RBP8.12□□□□□ -1.11
CKS1B-205ENST00000473344 POU3F3P20264 500 aaPredicted RBP8.12□□□□□ -1.11
CKS1B-205ENST00000473344 MX1P20591 662 aa8.12□□□□□ -1.11
CKS1B-205ENST00000473344 RPS6P62753 249 aaKnown RBP8.12□□□□□ -1.11
CKS1B-205ENST00000473344 PTPN11Q06124 597 aaPredicted RBP8.12□□□□□ -1.11
CKS1B-205ENST00000473344 PTGISQ16647 500 aa8.12□□□□□ -1.11
CKS1B-205ENST00000473344 BTNL9Q6UXG8 535 aa8.12□□□□□ -1.11
CKS1B-205ENST00000473344 DNERQ8NFT8 737 aa8.12□□□□□ -1.11
CKS1B-205ENST00000473344 HLA-CQ95604 372 aa8.12□□□□□ -1.11
CKS1B-205ENST00000473344 EPAS1Q99814 870 aa8.12□□□□□ -1.11
CKS1B-205ENST00000473344 TMEM47Q9BQJ4 181 aa8.12□□□□□ -1.11
CKS1B-205ENST00000473344 ANAPC4Q9UJX5 808 aa8.12□□□□□ -1.11
CKS1B-205ENST00000473344 ORC4O43929 436 aa8.11□□□□□ -1.11
CKS1B-205ENST00000473344 PDHBP11177 359 aa8.11□□□□□ -1.11
CKS1B-205ENST00000473344 NOVP48745 357 aa8.11□□□□□ -1.11
CKS1B-205ENST00000473344 TAP1Q03518 808 aa8.11□□□□□ -1.11
CKS1B-205ENST00000473344 USH1GQ495M9 461 aa8.11□□□□□ -1.11
CKS1B-205ENST00000473344 VPS53Q5VIR6 699 aa8.11□□□□□ -1.11
CKS1B-205ENST00000473344 CAGE1Q8TC20 777 aa8.11□□□□□ -1.11
CKS1B-205ENST00000473344 AFAP1L1Q8TED9 768 aa8.11□□□□□ -1.11
CKS1B-205ENST00000473344 PPP1R13LQ8WUF5 828 aa8.11□□□□□ -1.11
CKS1B-205ENST00000473344 CLEC4DQ8WXI8 215 aa8.11□□□□□ -1.11
CKS1B-205ENST00000473344 EVI5LQ96CN4 794 aa8.11□□□□□ -1.11
CKS1B-205ENST00000473344 VWCEQ96DN2 955 aa8.11□□□□□ -1.11
CKS1B-205ENST00000473344 CRBNQ96SW2 442 aa8.11□□□□□ -1.11
CKS1B-205ENST00000473344 LRRC37A2A6NM11 1700 aa8.11□□□□□ -1.11
CKS1B-205ENST00000473344 TTC28Q96AY4 2481 aa8.1□□□□□ -1.11
CKS1B-205ENST00000473344 WDR19Q8NEZ3 1342 aa8.1□□□□□ -1.11
CKS1B-205ENST00000473344 PARNO95453 639 aaKnown RBP8.1□□□□□ -1.11
CKS1B-205ENST00000473344 CASTP20810 708 aaKnown RBP8.1□□□□□ -1.11
CKS1B-205ENST00000473344 EDNRBP24530 442 aa8.1□□□□□ -1.11
CKS1B-205ENST00000473344 GRB10Q13322 594 aa8.1□□□□□ -1.11
CKS1B-205ENST00000473344 TMEM31Q5JXX7 168 aa8.1□□□□□ -1.11
CKS1B-205ENST00000473344 GPATCH4Q5T3I0 446 aaKnown RBP8.1□□□□□ -1.11
CKS1B-205ENST00000473344 KRT40Q6A162 431 aa8.1□□□□□ -1.11
CKS1B-205ENST00000473344 MFSD6Q6ZSS7 791 aa8.1□□□□□ -1.11
CKS1B-205ENST00000473344 LRRC8DQ7L1W4 858 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms